Gene annotation
Transcriptome id Sobic.002G242100.1
Synonym Sb02g027910
Functional annotation expressed protein
UniProt C5X3S5
Pfam -
Panther DB PTHR15141 PTHR15141:SF50
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g18470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G122866 - -
2 Sobic.003G383400 ZOS1-19 - C2H2 zinc finger protein, expressed -
3 Sobic.010G030600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
4 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
5 Sobic.001G194401 - -
6 Sobic.002G117300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin, putative, expressed -
7 Sobic.002G361600 ZOS7-10 - C2H2 zinc finger protein, expressed -
8 Sobic.010G234100 - -
9 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
10 Sobic.006G163033 - -
11 Sobic.003G125332 - K19347: SUN domain-containing protein 1/2
12 Sobic.010G188700 expressed protein -
13 Sobic.003G079466 - -
14 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
15 Sobic.003G277850 - -
16 Sobic.007G159300 basic helix-loop-helix, putative, expressed -
17 Sobic.001G044400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.002G363466 - -
19 Sobic.007G079500 hypothetical protein -
20 Sobic.006G209200 transferase family domain containing protein, expressed -


Gene co-expression network
sample Sobic002G242100 Sobic002G242100 Sobic007G122866 Sobic007G122866 Sobic002G242100--Sobic007G122866 Sobic003G383400 Sobic003G383400 Sobic002G242100--Sobic003G383400 Sobic010G030600 Sobic010G030600 Sobic002G242100--Sobic010G030600 Sobic001G052500 Sobic001G052500 Sobic002G242100--Sobic001G052500 Sobic001G194401 Sobic001G194401 Sobic002G242100--Sobic001G194401 Sobic002G117300 Sobic002G117300 Sobic002G242100--Sobic002G117300 Sobic002G361600 Sobic002G361600 Sobic002G242100--Sobic002G361600 Sobic010G234100 Sobic010G234100 Sobic002G242100--Sobic010G234100 Sobic003G076100 Sobic003G076100 Sobic002G242100--Sobic003G076100 Sobic007G122866--Sobic001G052500 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic004G279900 Sobic004G279900 Sobic007G122866--Sobic004G279900 Sobic006G163033 Sobic006G163033 Sobic007G122866--Sobic006G163033 Sobic007G122866--Sobic001G194401 Sobic003G277850 Sobic003G277850 Sobic007G122866--Sobic003G277850 Sobic006G253700 Sobic006G253700 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic003G383400--Sobic007G122866 Sobic003G299100 Sobic003G299100 Sobic003G383400--Sobic003G299100 Sobic003G252750 Sobic003G252750 Sobic003G383400--Sobic003G252750 Sobic005G068600 Sobic005G068600 Sobic003G383400--Sobic005G068600 Sobic003G383400--Sobic003G043550 Sobic003G383400--Sobic002G242100 Sobic002G363466 Sobic002G363466 Sobic003G383400--Sobic002G363466 Sobic001G020900 Sobic001G020900 Sobic003G383400--Sobic001G020900 Sobic008G035000 Sobic008G035000 Sobic003G383400--Sobic008G035000 Sobic001G234800 Sobic001G234800 Sobic010G030600--Sobic001G234800 Sobic010G030600--Sobic002G242100 Sobic010G030600--Sobic003G043550 Sobic001G044400 Sobic001G044400 Sobic010G030600--Sobic001G044400 Sobic010G030600--Sobic007G122866 Sobic009G069700 Sobic009G069700 Sobic010G030600--Sobic009G069700 Sobic001G225200 Sobic001G225200 Sobic010G030600--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic010G030600--Sobic001G225300 Sobic009G200566 Sobic009G200566 Sobic010G030600--Sobic009G200566 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic001G194401--Sobic007G122866 Sobic001G194401--Sobic001G052500 Sobic001G194401--Sobic002G117300 Sobic001G194401--Sobic002G242100 Sobic001G185450 Sobic001G185450 Sobic001G194401--Sobic001G185450 Sobic001G194401--Sobic004G195500 Sobic001G194401--Sobic003G076100 Sobic007G074200 Sobic007G074200 Sobic001G194401--Sobic007G074200 Sobic002G192000 Sobic002G192000 Sobic001G194401--Sobic002G192000 Sobic002G117300--Sobic001G194401 Sobic001G349300 Sobic001G349300 Sobic002G117300--Sobic001G349300 Sobic002G117300--Sobic007G122866 Sobic008G017400 Sobic008G017400 Sobic002G117300--Sobic008G017400 Sobic002G117300--Sobic002G242100 Sobic002G117300--Sobic006G163033 Sobic002G117300--Sobic003G383400 Sobic002G117300--Sobic001G052500 Sobic009G013600 Sobic009G013600 Sobic002G117300--Sobic009G013600 Sobic004G349237 Sobic004G349237 Sobic002G361600--Sobic004G349237 Sobic003G265150 Sobic003G265150 Sobic002G361600--Sobic003G265150 Sobic002G421501 Sobic002G421501 Sobic002G361600--Sobic002G421501 Sobic003G414900 Sobic003G414900 Sobic002G361600--Sobic003G414900 Sobic001G097800 Sobic001G097800 Sobic002G361600--Sobic001G097800 Sobic004G034100 Sobic004G034100 Sobic002G361600--Sobic004G034100 Sobic002G311300 Sobic002G311300 Sobic002G361600--Sobic002G311300 Sobic002G361600--Sobic002G242100 Sobic006G130700 Sobic006G130700 Sobic002G361600--Sobic006G130700 Sobic001G060600 Sobic001G060600 Sobic010G234100--Sobic001G060600 Sobic009G158200 Sobic009G158200 Sobic010G234100--Sobic009G158200 Sobic001G512100 Sobic001G512100 Sobic010G234100--Sobic001G512100 Sobic001G339000 Sobic001G339000 Sobic010G234100--Sobic001G339000 Sobic006G205800 Sobic006G205800 Sobic010G234100--Sobic006G205800 Sobic002G215866 Sobic002G215866 Sobic010G234100--Sobic002G215866 Sobic010G234100--Sobic004G279900 Sobic003G079466 Sobic003G079466 Sobic010G234100--Sobic003G079466 Sobic007G149400 Sobic007G149400 Sobic010G234100--Sobic007G149400 Sobic003G076100--Sobic007G122866 Sobic007G159300 Sobic007G159300 Sobic003G076100--Sobic007G159300 Sobic003G076100--Sobic001G052500 Sobic004G271100 Sobic004G271100 Sobic003G076100--Sobic004G271100 Sobic003G076100--Sobic006G163033 Sobic005G103800 Sobic005G103800 Sobic003G076100--Sobic005G103800 Sobic001G206600 Sobic001G206600 Sobic003G076100--Sobic001G206600 Sobic003G076100--Sobic003G277850 Sobic003G225000 Sobic003G225000 Sobic003G076100--Sobic003G225000
Octagon: transcription factors


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