Gene annotation
Transcriptome id Sobic.001G044400.1
Synonym Sb01g004090
Functional annotation UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
UniProt C5WW30
Pfam PF00201
Panther DB PTHR11926 PTHR11926:SF315
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G02100 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os10g17489.1 : UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036540 , Zm00025a008696 , Zm00025a044559 , Zm00025a044034
Brachypodium KQK15028 , KQJ88142 , PNT60796 , KQK13118 , PNT63441
Barley HORVU4Hr1G063660.1 , HORVU4Hr1G063660.3 , HORVU4Hr1G063660.2 , HORVU5Hr1G105340.1 , HORVU1Hr1G009200.1 , HORVU7Hr1G001570.1 , HORVU7Hr1G010370.2 , HORVU7Hr1G010370.1
Wheat TraesCS4D02G227300 , TraesCS1A02G047700 , TraesCS4B02G226700 , TraesCS2B02G291500 , TraesCS1D02G048800 , TraesCS4A02G070600 , TraesCS1B02G062100 , TraesCS5A02G437200 , TraesCS2D02G272700 , TraesCS5B02G439700 , TraesCS1D02G073700 , TraesCS2A02G273700 , TraesCS1A02G071400 , TraesCS1A02G071400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G161751 - -
2 Sobic.006G240600 - -
3 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.006G154500 GEM, putative, expressed -
5 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.004G203700 ubiquitin family protein, putative, expressed -
8 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
10 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
11 Sobic.003G073380 - -
12 Sobic.004G245700 expressed protein -
13 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.006G008000 O-methyltransferase, putative, expressed -
16 Sobic.005G086600 O-methyltransferase, putative, expressed -
17 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
18 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
19 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase


Gene co-expression network
sample Sobic001G044400 Sobic001G044400 Sobic004G161751 Sobic004G161751 Sobic001G044400--Sobic004G161751 Sobic006G240600 Sobic006G240600 Sobic001G044400--Sobic006G240600 Sobic003G426400 Sobic003G426400 Sobic001G044400--Sobic003G426400 Sobic006G154500 Sobic006G154500 Sobic001G044400--Sobic006G154500 Sobic009G145500 Sobic009G145500 Sobic001G044400--Sobic009G145500 Sobic003G264600 Sobic003G264600 Sobic001G044400--Sobic003G264600 Sobic004G203700 Sobic004G203700 Sobic001G044400--Sobic004G203700 Sobic001G318500 Sobic001G318500 Sobic001G044400--Sobic001G318500 Sobic003G043600 Sobic003G043600 Sobic001G044400--Sobic003G043600 Sobic003G079200 Sobic003G079200 Sobic004G161751--Sobic003G079200 Sobic003G073380 Sobic003G073380 Sobic004G161751--Sobic003G073380 Sobic005G086600 Sobic005G086600 Sobic004G161751--Sobic005G086600 Sobic006G008000 Sobic006G008000 Sobic004G161751--Sobic006G008000 Sobic004G161751--Sobic009G145500 Sobic009G145600 Sobic009G145600 Sobic004G161751--Sobic009G145600 Sobic002G063800 Sobic002G063800 Sobic004G161751--Sobic002G063800 Sobic006G235000 Sobic006G235000 Sobic004G161751--Sobic006G235000 Sobic004G161751--Sobic003G043600 Sobic006G240600--Sobic009G145500 Sobic002G243000 Sobic002G243000 Sobic006G240600--Sobic002G243000 Sobic006G240600--Sobic003G073380 Sobic006G240600--Sobic004G161751 Sobic010G259300 Sobic010G259300 Sobic006G240600--Sobic010G259300 Sobic001G401100 Sobic001G401100 Sobic006G240600--Sobic001G401100 Sobic006G240600--Sobic009G145600 Sobic006G240600--Sobic006G154500 Sobic006G240600--Sobic003G043600 Sobic002G055700 Sobic002G055700 Sobic003G426400--Sobic002G055700 Sobic003G303100 Sobic003G303100 Sobic003G426400--Sobic003G303100 Sobic009G111000 Sobic009G111000 Sobic003G426400--Sobic009G111000 Sobic001G367600 Sobic001G367600 Sobic003G426400--Sobic001G367600 Sobic003G426400--Sobic003G043600 Sobic004G237800 Sobic004G237800 Sobic003G426400--Sobic004G237800 Sobic005G063100 Sobic005G063100 Sobic003G426400--Sobic005G063100 Sobic006G141700 Sobic006G141700 Sobic003G426400--Sobic006G141700 Sobic003G426400--Sobic004G203700 Sobic006G154400 Sobic006G154400 Sobic006G154500--Sobic006G154400 Sobic006G154500--Sobic009G145500 Sobic006G154500--Sobic003G303100 Sobic006G154500--Sobic004G161751 Sobic006G154500--Sobic003G043600 Sobic006G154500--Sobic001G401100 Sobic010G175800 Sobic010G175800 Sobic006G154500--Sobic010G175800 Sobic002G338500 Sobic002G338500 Sobic006G154500--Sobic002G338500 Sobic006G154500--Sobic004G203700 Sobic009G145500--Sobic003G043600 Sobic009G145500--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic003G268600 Sobic003G268600 Sobic009G145500--Sobic003G268600 Sobic009G145500--Sobic002G338500 Sobic009G145500--Sobic006G235000 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800 Sobic003G408100 Sobic003G408100 Sobic003G264600--Sobic003G408100 Sobic010G063801 Sobic010G063801 Sobic003G264600--Sobic010G063801 Sobic003G264600--Sobic001G318500 Sobic001G054900 Sobic001G054900 Sobic003G264600--Sobic001G054900 Sobic002G327300 Sobic002G327300 Sobic003G264600--Sobic002G327300 Sobic004G340900 Sobic004G340900 Sobic003G264600--Sobic004G340900 Sobic003G228200 Sobic003G228200 Sobic003G264600--Sobic003G228200 Sobic006G116700 Sobic006G116700 Sobic003G264600--Sobic006G116700 Sobic003G264600--Sobic006G141700 Sobic004G203700--Sobic003G303100 Sobic004G203700--Sobic002G055700 Sobic004G203700--Sobic002G338500 Sobic004G203700--Sobic001G318500 Sobic004G203700--Sobic003G426400 Sobic004G203700--Sobic003G043600 Sobic003G382600 Sobic003G382600 Sobic004G203700--Sobic003G382600 Sobic002G200600 Sobic002G200600 Sobic004G203700--Sobic002G200600 Sobic004G203700--Sobic001G367600 Sobic002G004900 Sobic002G004900 Sobic001G318500--Sobic002G004900 Sobic002G017800 Sobic002G017800 Sobic001G318500--Sobic002G017800 Sobic001G318500--Sobic009G111000 Sobic002G302500 Sobic002G302500 Sobic001G318500--Sobic002G302500 Sobic001G318500--Sobic002G055700 Sobic001G318500--Sobic004G203700 Sobic001G318500--Sobic004G148200 Sobic001G318500--Sobic001G367600 Sobic008G027600 Sobic008G027600 Sobic001G318500--Sobic008G027600 Sobic003G043600--Sobic002G338500 Sobic003G043600--Sobic009G145500 Sobic003G043600--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic001G318700 Sobic001G318700 Sobic003G043600--Sobic001G318700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.