Gene annotation
Transcriptome id Sobic.002G117300.1
Synonym Sb02g010010
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
thaumatin, putative, expressed
UniProt C5X4F1
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38660 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os07g23730.1 : thaumatin, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT62219 , PNT62218 , PNT62217 , PNT62216 , KQJ85471
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G117300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G194401 - -
2 Sobic.001G349300 organic cation transporter-related, putative, expressed -
3 Sobic.007G122866 - -
4 Sobic.008G017400 expressed protein -
5 Sobic.002G242100 expressed protein -
6 Sobic.006G163033 - -
7 Sobic.003G383400 ZOS1-19 - C2H2 zinc finger protein, expressed -
8 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
9 Sobic.009G013600 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
10 Sobic.002G325100 expressed protein -
11 Sobic.008G135100 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.003G277850 - -
13 Sobic.007G079500 hypothetical protein -
14 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
15 Sobic.005G103800 miro, putative, expressed K07953: GTP-binding protein SAR1
16 Sobic.003G099232 - -
17 Sobic.009G021500 expressed protein -
18 Sobic.003G079466 - -
19 Sobic.003G438600 S-locus lectin protein kinase family protein, putative, expressed -
20 Sobic.003G225000 OsFBX26 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G117300 Sobic002G117300 Sobic001G194401 Sobic001G194401 Sobic002G117300--Sobic001G194401 Sobic001G349300 Sobic001G349300 Sobic002G117300--Sobic001G349300 Sobic007G122866 Sobic007G122866 Sobic002G117300--Sobic007G122866 Sobic008G017400 Sobic008G017400 Sobic002G117300--Sobic008G017400 Sobic002G242100 Sobic002G242100 Sobic002G117300--Sobic002G242100 Sobic006G163033 Sobic006G163033 Sobic002G117300--Sobic006G163033 Sobic003G383400 Sobic003G383400 Sobic002G117300--Sobic003G383400 Sobic001G052500 Sobic001G052500 Sobic002G117300--Sobic001G052500 Sobic009G013600 Sobic009G013600 Sobic002G117300--Sobic009G013600 Sobic001G194401--Sobic007G122866 Sobic001G194401--Sobic001G052500 Sobic001G194401--Sobic002G117300 Sobic001G194401--Sobic002G242100 Sobic001G185450 Sobic001G185450 Sobic001G194401--Sobic001G185450 Sobic004G195500 Sobic004G195500 Sobic001G194401--Sobic004G195500 Sobic003G076100 Sobic003G076100 Sobic001G194401--Sobic003G076100 Sobic007G074200 Sobic007G074200 Sobic001G194401--Sobic007G074200 Sobic002G192000 Sobic002G192000 Sobic001G194401--Sobic002G192000 Sobic001G349300--Sobic006G163033 Sobic001G349300--Sobic002G117300 Sobic003G427400 Sobic003G427400 Sobic001G349300--Sobic003G427400 Sobic001G349300--Sobic001G052500 Sobic004G044700 Sobic004G044700 Sobic001G349300--Sobic004G044700 Sobic007G079500 Sobic007G079500 Sobic001G349300--Sobic007G079500 Sobic003G223600 Sobic003G223600 Sobic001G349300--Sobic003G223600 Sobic001G349300--Sobic008G017400 Sobic003G079466 Sobic003G079466 Sobic001G349300--Sobic003G079466 Sobic007G122866--Sobic001G052500 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic004G279900 Sobic004G279900 Sobic007G122866--Sobic004G279900 Sobic007G122866--Sobic006G163033 Sobic007G122866--Sobic001G194401 Sobic003G277850 Sobic003G277850 Sobic007G122866--Sobic003G277850 Sobic006G253700 Sobic006G253700 Sobic007G122866--Sobic006G253700 Sobic007G122866--Sobic004G195500 Sobic008G017400--Sobic006G163033 Sobic003G123800 Sobic003G123800 Sobic008G017400--Sobic003G123800 Sobic004G093300 Sobic004G093300 Sobic008G017400--Sobic004G093300 Sobic008G017400--Sobic003G223600 Sobic008G017400--Sobic003G277850 Sobic008G017400--Sobic004G279900 Sobic008G035300 Sobic008G035300 Sobic008G017400--Sobic008G035300 Sobic008G017400--Sobic002G117300 Sobic001G383600 Sobic001G383600 Sobic008G017400--Sobic001G383600 Sobic002G242100--Sobic007G122866 Sobic002G242100--Sobic003G383400 Sobic010G030600 Sobic010G030600 Sobic002G242100--Sobic010G030600 Sobic002G242100--Sobic001G052500 Sobic002G242100--Sobic001G194401 Sobic002G242100--Sobic002G117300 Sobic002G361600 Sobic002G361600 Sobic002G242100--Sobic002G361600 Sobic010G234100 Sobic010G234100 Sobic002G242100--Sobic010G234100 Sobic002G242100--Sobic003G076100 Sobic006G163033--Sobic003G223600 Sobic007G159300 Sobic007G159300 Sobic006G163033--Sobic007G159300 Sobic006G163033--Sobic004G279900 Sobic006G174000 Sobic006G174000 Sobic006G163033--Sobic006G174000 Sobic006G163033--Sobic007G079500 Sobic006G163033--Sobic007G122866 Sobic006G163033--Sobic004G093300 Sobic006G205800 Sobic006G205800 Sobic006G163033--Sobic006G205800 Sobic006G209200 Sobic006G209200 Sobic006G163033--Sobic006G209200 Sobic003G383400--Sobic007G122866 Sobic003G299100 Sobic003G299100 Sobic003G383400--Sobic003G299100 Sobic003G252750 Sobic003G252750 Sobic003G383400--Sobic003G252750 Sobic005G068600 Sobic005G068600 Sobic003G383400--Sobic005G068600 Sobic003G383400--Sobic003G043550 Sobic003G383400--Sobic002G242100 Sobic002G363466 Sobic002G363466 Sobic003G383400--Sobic002G363466 Sobic001G020900 Sobic001G020900 Sobic003G383400--Sobic001G020900 Sobic008G035000 Sobic008G035000 Sobic003G383400--Sobic008G035000 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic008G043000 Sobic008G043000 Sobic009G013600--Sobic008G043000 Sobic003G255000 Sobic003G255000 Sobic009G013600--Sobic003G255000 Sobic009G225250 Sobic009G225250 Sobic009G013600--Sobic009G225250 Sobic002G392550 Sobic002G392550 Sobic009G013600--Sobic002G392550 Sobic002G357500 Sobic002G357500 Sobic009G013600--Sobic002G357500 Sobic002G250700 Sobic002G250700 Sobic009G013600--Sobic002G250700 Sobic005G002350 Sobic005G002350 Sobic009G013600--Sobic005G002350 Sobic010G133100 Sobic010G133100 Sobic009G013600--Sobic010G133100 Sobic009G080500 Sobic009G080500 Sobic009G013600--Sobic009G080500
Octagon: transcription factors


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