Gene annotation
Transcriptome id Sobic.003G438600.1
Synonym Sb03g046880, RLK1
Functional annotation S-locus lectin protein kinase family protein, putative, expressed
UniProt C5XJ88
Pfam PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF109
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G60900 : receptor-like protein kinase 1
RAP-DB (Rice) LOC_Os01g73390.1 : expressed protein
MaizeGDB (Corn) Zm00025a025879 , Zm00025a025878
Brachypodium PNT72556 , KQJ85553
Barley HORVU7Hr1G072690.1
Wheat TraesCS6A02G107500
Populus -


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cDNA sequences
Sobic.003G438600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G017400 expressed protein -
2 Sobic.010G220966 - -
3 Sobic.005G123000 gibberellin response modulator protein, putative, expressed -
4 Sobic.001G423500 expressed protein -
5 Sobic.009G168500 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.004G020500 expressed protein -
7 Sobic.010G030600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
8 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
9 Sobic.002G117300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin, putative, expressed -
10 Sobic.010G072200 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
11 Sobic.007G085600 glycosyl hydrolases family 16, putative, expressed -
12 Sobic.002G174700 ankyrin repeat family protein, putative, expressed -
13 Sobic.003G427400 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
14 Sobic.007G122866 - -
15 Sobic.010G103600 expressed protein -
16 Sobic.006G163033 - -
17 Sobic.003G085750 - -
18 Sobic.001G471150 - -
19 Sobic.003G277850 - -
20 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G438600 Sobic003G438600 Sobic008G017400 Sobic008G017400 Sobic003G438600--Sobic008G017400 Sobic010G220966 Sobic010G220966 Sobic003G438600--Sobic010G220966 Sobic005G123000 Sobic005G123000 Sobic003G438600--Sobic005G123000 Sobic001G423500 Sobic001G423500 Sobic003G438600--Sobic001G423500 Sobic009G168500 Sobic009G168500 Sobic003G438600--Sobic009G168500 Sobic004G020500 Sobic004G020500 Sobic003G438600--Sobic004G020500 Sobic010G030600 Sobic010G030600 Sobic003G438600--Sobic010G030600 Sobic001G052500 Sobic001G052500 Sobic003G438600--Sobic001G052500 Sobic002G117300 Sobic002G117300 Sobic003G438600--Sobic002G117300 Sobic006G163033 Sobic006G163033 Sobic008G017400--Sobic006G163033 Sobic003G123800 Sobic003G123800 Sobic008G017400--Sobic003G123800 Sobic004G093300 Sobic004G093300 Sobic008G017400--Sobic004G093300 Sobic003G223600 Sobic003G223600 Sobic008G017400--Sobic003G223600 Sobic003G277850 Sobic003G277850 Sobic008G017400--Sobic003G277850 Sobic004G279900 Sobic004G279900 Sobic008G017400--Sobic004G279900 Sobic008G035300 Sobic008G035300 Sobic008G017400--Sobic008G035300 Sobic008G017400--Sobic002G117300 Sobic001G383600 Sobic001G383600 Sobic008G017400--Sobic001G383600 Sobic010G220966--Sobic010G030600 Sobic003G076100 Sobic003G076100 Sobic010G220966--Sobic003G076100 Sobic005G103800 Sobic005G103800 Sobic010G220966--Sobic005G103800 Sobic004G239200 Sobic004G239200 Sobic010G220966--Sobic004G239200 Sobic003G034200 Sobic003G034200 Sobic010G220966--Sobic003G034200 Sobic010G220966--Sobic003G438600 Sobic010G124300 Sobic010G124300 Sobic010G220966--Sobic010G124300 Sobic004G192100 Sobic004G192100 Sobic010G220966--Sobic004G192100 Sobic010G220966--Sobic003G277850 Sobic009G028700 Sobic009G028700 Sobic005G123000--Sobic009G028700 Sobic005G214900 Sobic005G214900 Sobic005G123000--Sobic005G214900 Sobic009G080233 Sobic009G080233 Sobic005G123000--Sobic009G080233 Sobic003G152050 Sobic003G152050 Sobic005G123000--Sobic003G152050 Sobic004G139800 Sobic004G139800 Sobic005G123000--Sobic004G139800 Sobic008G098032 Sobic008G098032 Sobic005G123000--Sobic008G098032 Sobic005G035850 Sobic005G035850 Sobic005G123000--Sobic005G035850 Sobic004G087750 Sobic004G087750 Sobic005G123000--Sobic004G087750 Sobic009G174200 Sobic009G174200 Sobic005G123000--Sobic009G174200 Sobic010G077650 Sobic010G077650 Sobic001G423500--Sobic010G077650 Sobic003G024900 Sobic003G024900 Sobic001G423500--Sobic003G024900 Sobic010G075600 Sobic010G075600 Sobic001G423500--Sobic010G075600 Sobic002G070200 Sobic002G070200 Sobic001G423500--Sobic002G070200 Sobic001G423500--Sobic003G438600 Sobic001G192600 Sobic001G192600 Sobic001G423500--Sobic001G192600 Sobic003G277500 Sobic003G277500 Sobic001G423500--Sobic003G277500 Sobic005G080200 Sobic005G080200 Sobic001G423500--Sobic005G080200 Sobic006G246100 Sobic006G246100 Sobic001G423500--Sobic006G246100 Sobic004G177050 Sobic004G177050 Sobic009G168500--Sobic004G177050 Sobic002G400050 Sobic002G400050 Sobic009G168500--Sobic002G400050 Sobic003G095750 Sobic003G095750 Sobic009G168500--Sobic003G095750 Sobic010G092550 Sobic010G092550 Sobic009G168500--Sobic010G092550 Sobic010G197632 Sobic010G197632 Sobic009G168500--Sobic010G197632 Sobic009G196500 Sobic009G196500 Sobic009G168500--Sobic009G196500 Sobic009G168500--Sobic001G383600 Sobic001G110150 Sobic001G110150 Sobic009G168500--Sobic001G110150 Sobic002G034900 Sobic002G034900 Sobic009G168500--Sobic002G034900 Sobic002G069700 Sobic002G069700 Sobic004G020500--Sobic002G069700 Sobic010G101350 Sobic010G101350 Sobic004G020500--Sobic010G101350 Sobic004G020500--Sobic010G197632 Sobic003G095301 Sobic003G095301 Sobic004G020500--Sobic003G095301 Sobic001G218300 Sobic001G218300 Sobic004G020500--Sobic001G218300 Sobic004G020500--Sobic004G177050 Sobic005G094266 Sobic005G094266 Sobic004G020500--Sobic005G094266 Sobic009G110300 Sobic009G110300 Sobic004G020500--Sobic009G110300 Sobic003G358500 Sobic003G358500 Sobic004G020500--Sobic003G358500 Sobic001G234800 Sobic001G234800 Sobic010G030600--Sobic001G234800 Sobic002G242100 Sobic002G242100 Sobic010G030600--Sobic002G242100 Sobic003G043550 Sobic003G043550 Sobic010G030600--Sobic003G043550 Sobic001G044400 Sobic001G044400 Sobic010G030600--Sobic001G044400 Sobic007G122866 Sobic007G122866 Sobic010G030600--Sobic007G122866 Sobic009G069700 Sobic009G069700 Sobic010G030600--Sobic009G069700 Sobic001G225200 Sobic001G225200 Sobic010G030600--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic010G030600--Sobic001G225300 Sobic009G200566 Sobic009G200566 Sobic010G030600--Sobic009G200566 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic006G253700 Sobic006G253700 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic001G194401 Sobic001G194401 Sobic002G117300--Sobic001G194401 Sobic001G349300 Sobic001G349300 Sobic002G117300--Sobic001G349300 Sobic002G117300--Sobic007G122866 Sobic002G117300--Sobic008G017400 Sobic002G117300--Sobic002G242100 Sobic002G117300--Sobic006G163033 Sobic003G383400 Sobic003G383400 Sobic002G117300--Sobic003G383400 Sobic002G117300--Sobic001G052500 Sobic009G013600 Sobic009G013600 Sobic002G117300--Sobic009G013600
Octagon: transcription factors


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