Gene annotation
Transcriptome id Sobic.001G052500.1
Synonym Sb01g004810, PFK3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
6-phosphofructokinase, putative, expressed
UniProt C5WX24
Pfam PF00365
Panther DB PTHR13697 PTHR13697:SF23
NCBI CDD KOG2440; Pyrophosphate-dependent phosphofructo-1-kinase
KEGG Orthology K00850; pfkA, 6-phosphofructokinase 1
Gene Ontology GO:0006096; glycolytic process GO:00038726-phosphofructokinase activity


Orthologs (automatic annotation)
TAIR AT4G26270 : phosphofructokinase 3
RAP-DB (Rice) LOC_Os01g09570.1 : 6-phosphofructokinase, putative, expressed
MaizeGDB (Corn) Zm00025a037532 , Zm00025a027670
Brachypodium KQK07133
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G122866 - -
2 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
3 Sobic.004G280000 Hydroxyjasmonate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
4 Sobic.010G072200 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
5 Sobic.006G253700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
6 Sobic.001G108800 expressed protein -
7 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G085750 - -
9 Sobic.006G252532 - -
10 Sobic.001G194401 - -
11 Sobic.002G383050 - -
12 Sobic.003G139333 - -
13 Sobic.004G241100 NHL repeat-containing protein, putative, expressed -
14 Sobic.001G420600 - -
15 Sobic.003G079466 - -
16 Sobic.003G427400 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
17 Sobic.007G085600 glycosyl hydrolases family 16, putative, expressed -
18 Sobic.010G103600 expressed protein -
19 Sobic.002G242100 expressed protein -
20 Sobic.009G200566 - -


Gene co-expression network
sample Sobic001G052500 Sobic001G052500 Sobic007G122866 Sobic007G122866 Sobic001G052500--Sobic007G122866 Sobic003G076100 Sobic003G076100 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic006G253700 Sobic006G253700 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic007G122866--Sobic001G052500 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic004G279900 Sobic004G279900 Sobic007G122866--Sobic004G279900 Sobic006G163033 Sobic006G163033 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic003G277850 Sobic003G277850 Sobic007G122866--Sobic003G277850 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic003G076100--Sobic007G122866 Sobic007G159300 Sobic007G159300 Sobic003G076100--Sobic007G159300 Sobic003G076100--Sobic001G052500 Sobic004G271100 Sobic004G271100 Sobic003G076100--Sobic004G271100 Sobic003G076100--Sobic006G163033 Sobic005G103800 Sobic005G103800 Sobic003G076100--Sobic005G103800 Sobic001G206600 Sobic001G206600 Sobic003G076100--Sobic001G206600 Sobic003G076100--Sobic003G277850 Sobic003G225000 Sobic003G225000 Sobic003G076100--Sobic003G225000 Sobic004G108200 Sobic004G108200 Sobic004G280000--Sobic004G108200 Sobic009G224100 Sobic009G224100 Sobic004G280000--Sobic009G224100 Sobic006G075400 Sobic006G075400 Sobic004G280000--Sobic006G075400 Sobic004G156000 Sobic004G156000 Sobic004G280000--Sobic004G156000 Sobic004G243100 Sobic004G243100 Sobic004G280000--Sobic004G243100 Sobic007G017500 Sobic007G017500 Sobic004G280000--Sobic007G017500 Sobic001G195200 Sobic001G195200 Sobic004G280000--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic004G280000--Sobic002G234400 Sobic009G183900 Sobic009G183900 Sobic004G280000--Sobic009G183900 Sobic007G085600 Sobic007G085600 Sobic010G072200--Sobic007G085600 Sobic010G103600 Sobic010G103600 Sobic010G072200--Sobic010G103600 Sobic010G072200--Sobic001G052500 Sobic010G072200--Sobic003G085750 Sobic003G139333 Sobic003G139333 Sobic010G072200--Sobic003G139333 Sobic001G419100 Sobic001G419100 Sobic010G072200--Sobic001G419100 Sobic005G202400 Sobic005G202400 Sobic010G072200--Sobic005G202400 Sobic010G072200--Sobic006G253700 Sobic001G183800 Sobic001G183800 Sobic010G072200--Sobic001G183800 Sobic006G253700--Sobic003G043550 Sobic002G248201 Sobic002G248201 Sobic006G253700--Sobic002G248201 Sobic006G253700--Sobic007G122866 Sobic006G253700--Sobic003G085750 Sobic006G253700--Sobic001G052500 Sobic003G252750 Sobic003G252750 Sobic006G253700--Sobic003G252750 Sobic006G253700--Sobic007G085600 Sobic006G253700--Sobic010G072200 Sobic001G105900 Sobic001G105900 Sobic006G253700--Sobic001G105900 Sobic001G500000 Sobic001G500000 Sobic001G108800--Sobic001G500000 Sobic004G310200 Sobic004G310200 Sobic001G108800--Sobic004G310200 Sobic003G192100 Sobic003G192100 Sobic001G108800--Sobic003G192100 Sobic009G074100 Sobic009G074100 Sobic001G108800--Sobic009G074100 Sobic001G231700 Sobic001G231700 Sobic001G108800--Sobic001G231700 Sobic003G084400 Sobic003G084400 Sobic001G108800--Sobic003G084400 Sobic005G093000 Sobic005G093000 Sobic001G108800--Sobic005G093000 Sobic001G192600 Sobic001G192600 Sobic001G108800--Sobic001G192600 Sobic004G340900 Sobic004G340900 Sobic001G108800--Sobic004G340900 Sobic009G065500 Sobic009G065500 Sobic008G050500--Sobic009G065500 Sobic009G164600 Sobic009G164600 Sobic008G050500--Sobic009G164600 Sobic001G325000 Sobic001G325000 Sobic008G050500--Sobic001G325000 Sobic001G481500 Sobic001G481500 Sobic008G050500--Sobic001G481500 Sobic010G032100 Sobic010G032100 Sobic008G050500--Sobic010G032100 Sobic001G397200 Sobic001G397200 Sobic008G050500--Sobic001G397200 Sobic007G166000 Sobic007G166000 Sobic008G050500--Sobic007G166000 Sobic004G336500 Sobic004G336500 Sobic008G050500--Sobic004G336500 Sobic004G166200 Sobic004G166200 Sobic008G050500--Sobic004G166200 Sobic001G279350 Sobic001G279350 Sobic003G085750--Sobic001G279350 Sobic001G481300 Sobic001G481300 Sobic003G085750--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic003G085750--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic003G085750--Sobic007G214600 Sobic007G214400 Sobic007G214400 Sobic003G085750--Sobic007G214400 Sobic001G371800 Sobic001G371800 Sobic003G085750--Sobic001G371800 Sobic004G109600 Sobic004G109600 Sobic003G085750--Sobic004G109600 Sobic003G394400 Sobic003G394400 Sobic003G085750--Sobic003G394400 Sobic009G169000 Sobic009G169000 Sobic003G085750--Sobic009G169000 Sobic007G047200 Sobic007G047200 Sobic006G252532--Sobic007G047200 Sobic003G380700 Sobic003G380700 Sobic006G252532--Sobic003G380700 Sobic009G240100 Sobic009G240100 Sobic006G252532--Sobic009G240100 Sobic008G110151 Sobic008G110151 Sobic006G252532--Sobic008G110151 Sobic006G130700 Sobic006G130700 Sobic006G252532--Sobic006G130700 Sobic003G188700 Sobic003G188700 Sobic006G252532--Sobic003G188700 Sobic003G199650 Sobic003G199650 Sobic006G252532--Sobic003G199650 Sobic010G043350 Sobic010G043350 Sobic006G252532--Sobic010G043350 Sobic006G252532--Sobic004G279900
Octagon: transcription factors


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