Gene annotation
Transcriptome id Sobic.001G108800.1
Synonym Sb01g009700
Functional annotation expressed protein
UniProt C5WM42
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g51390.1 : expressed protein
MaizeGDB (Corn) Zm00025a016912 , Zm00025a007949
Brachypodium KQK13462
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
3 Sobic.003G192100 expressed protein -
4 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
5 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
6 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
7 Sobic.005G093000 - -
8 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
9 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
10 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
12 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
13 Sobic.004G101300 expressed protein -
14 Sobic.002G327300 expressed protein -
15 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G017800 expressed protein -
17 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
20 Sobic.004G046200 sulfotransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G108800 Sobic001G108800 Sobic001G500000 Sobic001G500000 Sobic001G108800--Sobic001G500000 Sobic004G310200 Sobic004G310200 Sobic001G108800--Sobic004G310200 Sobic003G192100 Sobic003G192100 Sobic001G108800--Sobic003G192100 Sobic009G074100 Sobic009G074100 Sobic001G108800--Sobic009G074100 Sobic001G231700 Sobic001G231700 Sobic001G108800--Sobic001G231700 Sobic003G084400 Sobic003G084400 Sobic001G108800--Sobic003G084400 Sobic005G093000 Sobic005G093000 Sobic001G108800--Sobic005G093000 Sobic001G192600 Sobic001G192600 Sobic001G108800--Sobic001G192600 Sobic004G340900 Sobic004G340900 Sobic001G108800--Sobic004G340900 Sobic001G500000--Sobic003G084400 Sobic002G287100 Sobic002G287100 Sobic001G500000--Sobic002G287100 Sobic001G481400 Sobic001G481400 Sobic001G500000--Sobic001G481400 Sobic009G240600 Sobic009G240600 Sobic001G500000--Sobic009G240600 Sobic004G046200 Sobic004G046200 Sobic001G500000--Sobic004G046200 Sobic001G367600 Sobic001G367600 Sobic001G500000--Sobic001G367600 Sobic009G111000 Sobic009G111000 Sobic001G500000--Sobic009G111000 Sobic001G500000--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G500000--Sobic006G103000 Sobic002G003800 Sobic002G003800 Sobic004G310200--Sobic002G003800 Sobic003G311800 Sobic003G311800 Sobic004G310200--Sobic003G311800 Sobic004G042000 Sobic004G042000 Sobic004G310200--Sobic004G042000 Sobic001G304100 Sobic001G304100 Sobic004G310200--Sobic001G304100 Sobic001G049900 Sobic001G049900 Sobic004G310200--Sobic001G049900 Sobic004G310200--Sobic001G500000 Sobic010G252401 Sobic010G252401 Sobic004G310200--Sobic010G252401 Sobic002G213600 Sobic002G213600 Sobic004G310200--Sobic002G213600 Sobic004G310200--Sobic003G084400 Sobic005G018700 Sobic005G018700 Sobic003G192100--Sobic005G018700 Sobic004G101300 Sobic004G101300 Sobic003G192100--Sobic004G101300 Sobic003G037500 Sobic003G037500 Sobic003G192100--Sobic003G037500 Sobic007G155000 Sobic007G155000 Sobic003G192100--Sobic007G155000 Sobic002G245100 Sobic002G245100 Sobic003G192100--Sobic002G245100 Sobic003G192100--Sobic001G231700 Sobic001G050100 Sobic001G050100 Sobic003G192100--Sobic001G050100 Sobic003G192100--Sobic001G367600 Sobic003G192100--Sobic004G340900 Sobic005G011300 Sobic005G011300 Sobic009G074100--Sobic005G011300 Sobic004G100700 Sobic004G100700 Sobic009G074100--Sobic004G100700 Sobic004G306300 Sobic004G306300 Sobic009G074100--Sobic004G306300 Sobic001G389000 Sobic001G389000 Sobic009G074100--Sobic001G389000 Sobic003G393900 Sobic003G393900 Sobic009G074100--Sobic003G393900 Sobic001G169500 Sobic001G169500 Sobic009G074100--Sobic001G169500 Sobic001G459800 Sobic001G459800 Sobic009G074100--Sobic001G459800 Sobic003G228900 Sobic003G228900 Sobic009G074100--Sobic003G228900 Sobic009G074100--Sobic004G340900 Sobic006G277600 Sobic006G277600 Sobic001G231700--Sobic006G277600 Sobic001G402200 Sobic001G402200 Sobic001G231700--Sobic001G402200 Sobic001G231700--Sobic001G367600 Sobic001G231700--Sobic006G103000 Sobic001G231700--Sobic009G240600 Sobic006G234800 Sobic006G234800 Sobic001G231700--Sobic006G234800 Sobic001G231700--Sobic001G481400 Sobic001G231700--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic001G231700--Sobic002G188900 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic003G084400--Sobic001G367600 Sobic005G107900 Sobic005G107900 Sobic003G084400--Sobic005G107900 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic002G329000 Sobic002G329000 Sobic005G093000--Sobic002G329000 Sobic005G093000--Sobic001G389000 Sobic010G136000 Sobic010G136000 Sobic005G093000--Sobic010G136000 Sobic010G195500 Sobic010G195500 Sobic005G093000--Sobic010G195500 Sobic010G268400 Sobic010G268400 Sobic005G093000--Sobic010G268400 Sobic003G429000 Sobic003G429000 Sobic005G093000--Sobic003G429000 Sobic005G093000--Sobic005G018700 Sobic005G093000--Sobic001G500000 Sobic005G093000--Sobic009G074100 Sobic002G192000 Sobic002G192000 Sobic001G192600--Sobic002G192000 Sobic001G192600--Sobic001G367600 Sobic001G038900 Sobic001G038900 Sobic001G192600--Sobic001G038900 Sobic006G158600 Sobic006G158600 Sobic001G192600--Sobic006G158600 Sobic001G423800 Sobic001G423800 Sobic001G192600--Sobic001G423800 Sobic001G055600 Sobic001G055600 Sobic001G192600--Sobic001G055600 Sobic001G481100 Sobic001G481100 Sobic001G192600--Sobic001G481100 Sobic009G221400 Sobic009G221400 Sobic001G192600--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic001G192600--Sobic002G353900 Sobic009G159400 Sobic009G159400 Sobic004G340900--Sobic009G159400 Sobic002G017800 Sobic002G017800 Sobic004G340900--Sobic002G017800 Sobic009G077800 Sobic009G077800 Sobic004G340900--Sobic009G077800 Sobic010G259600 Sobic010G259600 Sobic004G340900--Sobic010G259600 Sobic004G340900--Sobic001G389000 Sobic004G340900--Sobic005G018700 Sobic004G321300 Sobic004G321300 Sobic004G340900--Sobic004G321300 Sobic004G340900--Sobic003G084400 Sobic005G196800 Sobic005G196800 Sobic004G340900--Sobic005G196800
Octagon: transcription factors


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