Gene annotation
Transcriptome id Sobic.010G072200.2,Sobic.010G072200.1
Synonym CAD1, Sb10g006310, SbCAD4-1, ATCAD1, Cinnamyl alcohol dehydrogenase 4-1
Functional annotation Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
dehydrogenase, putative, expressed
UniProt A0A1W0VRW1 , C5Z5Y8
Pfam PF08240
Panther DB PTHR11695 PTHR11695:SF506
NCBI CDD -
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G72680 : cinnamyl-alcohol dehydrogenase
RAP-DB (Rice) LOC_Os10g11810.2,LOC_Os10g11810.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a009708 , Zm00025a049694
Brachypodium -
Barley HORVU3Hr1G097060.1 , HORVU3Hr1G097140.4 , HORVU3Hr1G097140.5 , HORVU3Hr1G097140.6 , HORVU3Hr1G097140.1 , HORVU3Hr1G097140.2 , HORVU3Hr1G097140.3 , HORVU3Hr1G097160.2 , HORVU3Hr1G097160.1 , HORVU3Hr1G097140.10
Wheat TraesCS3A02G448400 , TraesCS3D02G440900 , TraesCS3B02G484500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G085600 glycosyl hydrolases family 16, putative, expressed -
2 Sobic.010G103600 expressed protein -
3 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
4 Sobic.003G085750 - -
5 Sobic.003G139333 - -
6 Sobic.001G419100 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
7 Sobic.005G202400 integral membrane protein TIGR01569 containing protein, expressed -
8 Sobic.006G253700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
9 Sobic.001G183800 OsFBX107 - F-box domain containing protein, expressed -
10 Sobic.003G079466 - -
11 Sobic.010G082201 - K13681: xyloglucan fucosyltransferase
12 Sobic.004G286000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
13 Sobic.001G481500 - -
14 Sobic.009G032566 - -
15 Sobic.001G279350 - -
16 Sobic.001G325000 expressed protein -
17 Sobic.005G050350 - -
18 Sobic.003G138300 expressed protein -
19 Sobic.004G280000 Hydroxyjasmonate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
20 Sobic.007G122866 - -


Gene co-expression network
sample Sobic010G072200 Sobic010G072200 Sobic007G085600 Sobic007G085600 Sobic010G072200--Sobic007G085600 Sobic010G103600 Sobic010G103600 Sobic010G072200--Sobic010G103600 Sobic001G052500 Sobic001G052500 Sobic010G072200--Sobic001G052500 Sobic003G085750 Sobic003G085750 Sobic010G072200--Sobic003G085750 Sobic003G139333 Sobic003G139333 Sobic010G072200--Sobic003G139333 Sobic001G419100 Sobic001G419100 Sobic010G072200--Sobic001G419100 Sobic005G202400 Sobic005G202400 Sobic010G072200--Sobic005G202400 Sobic006G253700 Sobic006G253700 Sobic010G072200--Sobic006G253700 Sobic001G183800 Sobic001G183800 Sobic010G072200--Sobic001G183800 Sobic007G085600--Sobic010G072200 Sobic007G085600--Sobic003G085750 Sobic007G085600--Sobic010G103600 Sobic007G085600--Sobic003G139333 Sobic001G481500 Sobic001G481500 Sobic007G085600--Sobic001G481500 Sobic002G245200 Sobic002G245200 Sobic007G085600--Sobic002G245200 Sobic001G279350 Sobic001G279350 Sobic007G085600--Sobic001G279350 Sobic007G085600--Sobic006G253700 Sobic003G394400 Sobic003G394400 Sobic007G085600--Sobic003G394400 Sobic010G103600--Sobic010G072200 Sobic010G103600--Sobic007G085600 Sobic001G476500 Sobic001G476500 Sobic010G103600--Sobic001G476500 Sobic002G287100 Sobic002G287100 Sobic010G103600--Sobic002G287100 Sobic009G032800 Sobic009G032800 Sobic010G103600--Sobic009G032800 Sobic005G179200 Sobic005G179200 Sobic010G103600--Sobic005G179200 Sobic008G186100 Sobic008G186100 Sobic010G103600--Sobic008G186100 Sobic006G092500 Sobic006G092500 Sobic010G103600--Sobic006G092500 Sobic001G320400 Sobic001G320400 Sobic010G103600--Sobic001G320400 Sobic007G122866 Sobic007G122866 Sobic001G052500--Sobic007G122866 Sobic003G076100 Sobic003G076100 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic003G085750--Sobic001G279350 Sobic001G481300 Sobic001G481300 Sobic003G085750--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic003G085750--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic003G085750--Sobic007G214600 Sobic007G214400 Sobic007G214400 Sobic003G085750--Sobic007G214400 Sobic001G371800 Sobic001G371800 Sobic003G085750--Sobic001G371800 Sobic004G109600 Sobic004G109600 Sobic003G085750--Sobic004G109600 Sobic003G085750--Sobic003G394400 Sobic009G169000 Sobic009G169000 Sobic003G085750--Sobic009G169000 Sobic003G139333--Sobic010G072200 Sobic003G139333--Sobic007G085600 Sobic003G139333--Sobic001G052500 Sobic004G034100 Sobic004G034100 Sobic003G139333--Sobic004G034100 Sobic003G126200 Sobic003G126200 Sobic003G139333--Sobic003G126200 Sobic010G031900 Sobic010G031900 Sobic003G139333--Sobic010G031900 Sobic002G223550 Sobic002G223550 Sobic003G139333--Sobic002G223550 Sobic006G230600 Sobic006G230600 Sobic003G139333--Sobic006G230600 Sobic003G139333--Sobic010G103600 Sobic001G419100--Sobic010G072200 Sobic003G430700 Sobic003G430700 Sobic001G419100--Sobic003G430700 Sobic010G082201 Sobic010G082201 Sobic001G419100--Sobic010G082201 Sobic001G419100--Sobic001G183800 Sobic003G252750 Sobic003G252750 Sobic001G419100--Sobic003G252750 Sobic001G419100--Sobic007G085600 Sobic009G032566 Sobic009G032566 Sobic001G419100--Sobic009G032566 Sobic004G177050 Sobic004G177050 Sobic001G419100--Sobic004G177050 Sobic001G419100--Sobic006G253700 Sobic004G217800 Sobic004G217800 Sobic005G202400--Sobic004G217800 Sobic006G249300 Sobic006G249300 Sobic005G202400--Sobic006G249300 Sobic001G309600 Sobic001G309600 Sobic005G202400--Sobic001G309600 Sobic005G202400--Sobic001G481500 Sobic010G015300 Sobic010G015300 Sobic005G202400--Sobic010G015300 Sobic006G150700 Sobic006G150700 Sobic005G202400--Sobic006G150700 Sobic003G138300 Sobic003G138300 Sobic005G202400--Sobic003G138300 Sobic005G063300 Sobic005G063300 Sobic005G202400--Sobic005G063300 Sobic001G139100 Sobic001G139100 Sobic005G202400--Sobic001G139100 Sobic003G043550 Sobic003G043550 Sobic006G253700--Sobic003G043550 Sobic002G248201 Sobic002G248201 Sobic006G253700--Sobic002G248201 Sobic006G253700--Sobic007G122866 Sobic006G253700--Sobic003G085750 Sobic006G253700--Sobic001G052500 Sobic006G253700--Sobic003G252750 Sobic006G253700--Sobic007G085600 Sobic006G253700--Sobic010G072200 Sobic001G105900 Sobic001G105900 Sobic006G253700--Sobic001G105900 Sobic001G002900 Sobic001G002900 Sobic001G183800--Sobic001G002900 Sobic001G185700 Sobic001G185700 Sobic001G183800--Sobic001G185700 Sobic003G123800 Sobic003G123800 Sobic001G183800--Sobic003G123800 Sobic001G383600 Sobic001G383600 Sobic001G183800--Sobic001G383600 Sobic007G034650 Sobic007G034650 Sobic001G183800--Sobic007G034650 Sobic010G197632 Sobic010G197632 Sobic001G183800--Sobic010G197632 Sobic003G095750 Sobic003G095750 Sobic001G183800--Sobic003G095750 Sobic008G031800 Sobic008G031800 Sobic001G183800--Sobic008G031800 Sobic006G155150 Sobic006G155150 Sobic001G183800--Sobic006G155150
Octagon: transcription factors


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