Gene annotation
Transcriptome id Sobic.004G286000.1
Synonym Sb04g032190
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
protein kinase domain containing protein, expressed
UniProt C5Y1B4
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF2
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G17220 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g44920.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039868 , Zm00025a027237 , Zm00025a056803 , Zm00025a018394 , Zm00025a018543 , Zm00025a049587 , Zm00025a041769 , Zm00025a006844 , Zm00025a018728 , Zm00025a000434 , Zm00025a025800 , Zm00025a000914 , Zm00025a048740 , Zm00025a032271 , Zm00025a053364 , Zm00025a035043
Brachypodium KQK07880 , KQJ84062 , KQJ84063 , KQK21320 , PNT67415 , PNT61665 , PNT61664 , PNT69199 , KQJ96794 , KQK23550 , KQK00688
Barley HORVU7Hr1G121690.11 , HORVU7Hr1G121690.12 , HORVU2Hr1G095970.9 , HORVU2Hr1G095970.2 , HORVU2Hr1G095970.3 , HORVU2Hr1G095970.1 , HORVU2Hr1G095970.4 , HORVU6Hr1G064690.7 , HORVU6Hr1G064690.6 , HORVU6Hr1G064690.5 , HORVU6Hr1G064690.4 , HORVU6Hr1G064690.3 , HORVU6Hr1G064690.2 , HORVU6Hr1G064690.9 , HORVU6Hr1G064690.8 , HORVU4Hr1G082100.1 , HORVU4Hr1G082100.2 , HORVU4Hr1G082100.5 , HORVU4Hr1G082100.4 , HORVU7Hr1G121690.3 , HORVU2Hr1G095950.1 , HORVU2Hr1G095950.2 , HORVU6Hr1G064690.15 , HORVU6Hr1G064690.14 , HORVU6Hr1G064690.13 , HORVU6Hr1G064690.12 , HORVU6Hr1G064690.11 , HORVU6Hr1G064690.10 , HORVU7Hr1G121690.6 , HORVU7Hr1G121690.5 , HORVU7Hr1G121690.1 , HORVU0Hr1G039910.2 , HORVU2Hr1G095970.10 , HORVU2Hr1G095970.12 , HORVU2Hr1G095970.13 , HORVU7Hr1G088710.3 , HORVU7Hr1G088710.2 , HORVU0Hr1G007070.2 , HORVU0Hr1G007070.3 , HORVU0Hr1G007070.1
Wheat TraesCS3B02G355700 , TraesCS2B02G114900 , TraesCS3D02G319800 , TraesCS6D02G235300 , TraesCS7B02G473700 , TraesCSU02G105900 , TraesCS2B02G422500 , TraesCS2B02G422500 , TraesCS6B02G271700 , TraesCS4D02G322300 , TraesCS4D02G322300 , TraesCS6A02G253700 , TraesCS5A02G497700 , TraesCS1B02G149900 , TraesCS1B02G149900 , TraesCS2A02G404600 , TraesCS1D02G134500 , TraesCS2D02G401500 , TraesCS2D02G401500 , TraesCS2D02G401500 , TraesCS4B02G294300 , TraesCS4D02G293200 , TraesCS3A02G326400 , TraesCS2D02G098200 , TraesCS4B02G325400 , TraesCS7A02G550300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
2 Sobic.001G108800 expressed protein -
3 Sobic.002G407100 expressed protein -
4 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
5 Sobic.002G327300 expressed protein -
6 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
7 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G046900 expressed protein -
9 Sobic.010G252401 - K14488: SAUR family protein
10 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
11 Sobic.001G169500 - -
12 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G139100 expressed protein -
14 Sobic.006G150700 DEF12 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
17 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
18 Sobic.006G249300 expressed protein -
19 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.003G376100 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol


Gene co-expression network
sample Sobic004G286000 Sobic004G286000 Sobic004G310200 Sobic004G310200 Sobic004G286000--Sobic004G310200 Sobic001G108800 Sobic001G108800 Sobic004G286000--Sobic001G108800 Sobic002G407100 Sobic002G407100 Sobic004G286000--Sobic002G407100 Sobic009G074100 Sobic009G074100 Sobic004G286000--Sobic009G074100 Sobic002G327300 Sobic002G327300 Sobic004G286000--Sobic002G327300 Sobic003G084400 Sobic003G084400 Sobic004G286000--Sobic003G084400 Sobic010G198600 Sobic010G198600 Sobic004G286000--Sobic010G198600 Sobic006G046900 Sobic006G046900 Sobic004G286000--Sobic006G046900 Sobic010G252401 Sobic010G252401 Sobic004G286000--Sobic010G252401 Sobic002G003800 Sobic002G003800 Sobic004G310200--Sobic002G003800 Sobic003G311800 Sobic003G311800 Sobic004G310200--Sobic003G311800 Sobic004G042000 Sobic004G042000 Sobic004G310200--Sobic004G042000 Sobic001G304100 Sobic001G304100 Sobic004G310200--Sobic001G304100 Sobic001G049900 Sobic001G049900 Sobic004G310200--Sobic001G049900 Sobic001G500000 Sobic001G500000 Sobic004G310200--Sobic001G500000 Sobic004G310200--Sobic010G252401 Sobic002G213600 Sobic002G213600 Sobic004G310200--Sobic002G213600 Sobic004G310200--Sobic003G084400 Sobic001G108800--Sobic001G500000 Sobic001G108800--Sobic004G310200 Sobic003G192100 Sobic003G192100 Sobic001G108800--Sobic003G192100 Sobic001G108800--Sobic009G074100 Sobic001G231700 Sobic001G231700 Sobic001G108800--Sobic001G231700 Sobic001G108800--Sobic003G084400 Sobic005G093000 Sobic005G093000 Sobic001G108800--Sobic005G093000 Sobic001G192600 Sobic001G192600 Sobic001G108800--Sobic001G192600 Sobic004G340900 Sobic004G340900 Sobic001G108800--Sobic004G340900 Sobic001G397300 Sobic001G397300 Sobic002G407100--Sobic001G397300 Sobic007G178000 Sobic007G178000 Sobic002G407100--Sobic007G178000 Sobic009G121900 Sobic009G121900 Sobic002G407100--Sobic009G121900 Sobic002G407100--Sobic002G327300 Sobic002G250000 Sobic002G250000 Sobic002G407100--Sobic002G250000 Sobic001G432700 Sobic001G432700 Sobic002G407100--Sobic001G432700 Sobic007G006300 Sobic007G006300 Sobic002G407100--Sobic007G006300 Sobic002G327201 Sobic002G327201 Sobic002G407100--Sobic002G327201 Sobic002G407100--Sobic009G074100 Sobic005G011300 Sobic005G011300 Sobic009G074100--Sobic005G011300 Sobic004G100700 Sobic004G100700 Sobic009G074100--Sobic004G100700 Sobic004G306300 Sobic004G306300 Sobic009G074100--Sobic004G306300 Sobic001G389000 Sobic001G389000 Sobic009G074100--Sobic001G389000 Sobic003G393900 Sobic003G393900 Sobic009G074100--Sobic003G393900 Sobic001G169500 Sobic001G169500 Sobic009G074100--Sobic001G169500 Sobic001G459800 Sobic001G459800 Sobic009G074100--Sobic001G459800 Sobic003G228900 Sobic003G228900 Sobic009G074100--Sobic003G228900 Sobic009G074100--Sobic004G340900 Sobic010G008400 Sobic010G008400 Sobic002G327300--Sobic010G008400 Sobic003G264600 Sobic003G264600 Sobic002G327300--Sobic003G264600 Sobic004G046200 Sobic004G046200 Sobic002G327300--Sobic004G046200 Sobic002G327300--Sobic003G084400 Sobic003G228200 Sobic003G228200 Sobic002G327300--Sobic003G228200 Sobic003G319500 Sobic003G319500 Sobic002G327300--Sobic003G319500 Sobic002G327100 Sobic002G327100 Sobic002G327300--Sobic002G327100 Sobic002G327300--Sobic001G500000 Sobic002G017800 Sobic002G017800 Sobic002G327300--Sobic002G017800 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic001G367600 Sobic001G367600 Sobic003G084400--Sobic001G367600 Sobic005G107900 Sobic005G107900 Sobic003G084400--Sobic005G107900 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic001G280800 Sobic001G280800 Sobic010G198600--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic010G198600--Sobic001G138600 Sobic003G382800 Sobic003G382800 Sobic010G198600--Sobic003G382800 Sobic010G198600--Sobic001G169500 Sobic004G336500 Sobic004G336500 Sobic010G198600--Sobic004G336500 Sobic006G190100 Sobic006G190100 Sobic010G198600--Sobic006G190100 Sobic002G261200 Sobic002G261200 Sobic010G198600--Sobic002G261200 Sobic003G432700 Sobic003G432700 Sobic010G198600--Sobic003G432700 Sobic009G184000 Sobic009G184000 Sobic010G198600--Sobic009G184000 Sobic006G046900--Sobic001G169500 Sobic006G046900--Sobic005G011300 Sobic006G249300 Sobic006G249300 Sobic006G046900--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic006G046900--Sobic001G139100 Sobic003G377100 Sobic003G377100 Sobic006G046900--Sobic003G377100 Sobic006G046900--Sobic001G459800 Sobic008G186100 Sobic008G186100 Sobic006G046900--Sobic008G186100 Sobic006G046900--Sobic004G336500 Sobic002G068600 Sobic002G068600 Sobic006G046900--Sobic002G068600 Sobic010G252401--Sobic004G310200 Sobic010G252401--Sobic002G003800 Sobic009G181800 Sobic009G181800 Sobic010G252401--Sobic009G181800 Sobic010G252401--Sobic004G042000 Sobic010G252401--Sobic003G319500 Sobic010G252401--Sobic001G500000 Sobic010G252401--Sobic004G046200 Sobic010G184800 Sobic010G184800 Sobic010G252401--Sobic010G184800 Sobic010G252401--Sobic001G139100
Octagon: transcription factors


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