Gene annotation
Transcriptome id Sobic.003G225000.1
Synonym Sb03g028320
Functional annotation OsFBX26 - F-box domain containing protein, expressed
UniProt C5XR59
Pfam -
Panther DB PTHR31215 PTHR31215:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46170 : F-box family protein
RAP-DB (Rice) LOC_Os01g56390.1 : OsFBX26 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037900 , Zm00025a027401 , Zm00025a044194
Brachypodium PNT72938 , KQK09954 , KQK09955 , KQK05479 , KQK05478 , KQK05480
Barley HORVU3Hr1G075050.3 , HORVU1Hr1G077600.2 , HORVU1Hr1G077600.5 , HORVU3Hr1G075050.2 , HORVU3Hr1G075050.1
Wheat TraesCS1B02G342700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G079466 - -
2 Sobic.007G079500 hypothetical protein -
3 Sobic.007G122866 - -
4 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
5 Sobic.004G279900 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
7 Sobic.004G271100 expressed protein -
8 Sobic.001G343100 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed -
9 Sobic.006G163033 - -
10 Sobic.003G277850 - -
11 Sobic.003G223600 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
12 Sobic.006G209200 transferase family domain containing protein, expressed -
13 Sobic.009G158200 - -
14 Sobic.001G173251 - -
15 Sobic.007G047200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.004G093300 interferon-related developmental regulator family protein, putative, expressed -
17 Sobic.007G002400 - -
18 Sobic.009G240100 receptor-like protein kinase homolog RK20-1, putative, expressed -
19 Sobic.010G124300 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
20 Sobic.003G124900 serpin domain containing protein, putative, expressed K13963: serpin B


Gene co-expression network
sample Sobic003G225000 Sobic003G225000 Sobic003G079466 Sobic003G079466 Sobic003G225000--Sobic003G079466 Sobic007G079500 Sobic007G079500 Sobic003G225000--Sobic007G079500 Sobic007G122866 Sobic007G122866 Sobic003G225000--Sobic007G122866 Sobic003G076100 Sobic003G076100 Sobic003G225000--Sobic003G076100 Sobic004G279900 Sobic004G279900 Sobic003G225000--Sobic004G279900 Sobic001G052500 Sobic001G052500 Sobic003G225000--Sobic001G052500 Sobic004G271100 Sobic004G271100 Sobic003G225000--Sobic004G271100 Sobic001G343100 Sobic001G343100 Sobic003G225000--Sobic001G343100 Sobic006G163033 Sobic006G163033 Sobic003G225000--Sobic006G163033 Sobic003G079466--Sobic003G225000 Sobic003G079466--Sobic007G079500 Sobic010G234100 Sobic010G234100 Sobic003G079466--Sobic010G234100 Sobic002G281100 Sobic002G281100 Sobic003G079466--Sobic002G281100 Sobic003G079466--Sobic001G052500 Sobic009G158200 Sobic009G158200 Sobic003G079466--Sobic009G158200 Sobic003G079466--Sobic007G122866 Sobic004G287000 Sobic004G287000 Sobic003G079466--Sobic004G287000 Sobic003G223600 Sobic003G223600 Sobic003G079466--Sobic003G223600 Sobic001G173251 Sobic001G173251 Sobic007G079500--Sobic001G173251 Sobic002G363466 Sobic002G363466 Sobic007G079500--Sobic002G363466 Sobic006G209200 Sobic006G209200 Sobic007G079500--Sobic006G209200 Sobic004G093300 Sobic004G093300 Sobic007G079500--Sobic004G093300 Sobic003G277850 Sobic003G277850 Sobic007G079500--Sobic003G277850 Sobic007G079500--Sobic003G079466 Sobic007G079500--Sobic004G279900 Sobic007G079500--Sobic003G223600 Sobic007G002400 Sobic007G002400 Sobic007G079500--Sobic007G002400 Sobic007G122866--Sobic001G052500 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic007G122866--Sobic004G279900 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic007G122866--Sobic003G277850 Sobic006G253700 Sobic006G253700 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic003G076100--Sobic007G122866 Sobic007G159300 Sobic007G159300 Sobic003G076100--Sobic007G159300 Sobic003G076100--Sobic001G052500 Sobic003G076100--Sobic004G271100 Sobic003G076100--Sobic006G163033 Sobic005G103800 Sobic005G103800 Sobic003G076100--Sobic005G103800 Sobic001G206600 Sobic001G206600 Sobic003G076100--Sobic001G206600 Sobic003G076100--Sobic003G277850 Sobic003G076100--Sobic003G225000 Sobic001G476201 Sobic001G476201 Sobic004G279900--Sobic001G476201 Sobic001G013701 Sobic001G013701 Sobic004G279900--Sobic001G013701 Sobic001G383600 Sobic001G383600 Sobic004G279900--Sobic001G383600 Sobic004G279900--Sobic004G093300 Sobic004G279900--Sobic003G223600 Sobic003G095301 Sobic003G095301 Sobic004G279900--Sobic003G095301 Sobic004G279900--Sobic006G209200 Sobic005G120466 Sobic005G120466 Sobic004G279900--Sobic005G120466 Sobic003G294550 Sobic003G294550 Sobic004G279900--Sobic003G294550 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic004G271100--Sobic003G076100 Sobic004G271100--Sobic007G122866 Sobic004G271100--Sobic006G163033 Sobic004G271100--Sobic007G159300 Sobic008G028900 Sobic008G028900 Sobic004G271100--Sobic008G028900 Sobic004G271100--Sobic006G252532 Sobic003G427400 Sobic003G427400 Sobic004G271100--Sobic003G427400 Sobic004G271100--Sobic003G225000 Sobic002G204800 Sobic002G204800 Sobic004G271100--Sobic002G204800 Sobic001G343100--Sobic007G122866 Sobic007G047200 Sobic007G047200 Sobic001G343100--Sobic007G047200 Sobic001G343100--Sobic003G225000 Sobic001G343100--Sobic003G076100 Sobic001G343100--Sobic003G277850 Sobic001G343100--Sobic007G079500 Sobic001G343100--Sobic001G052500 Sobic008G017400 Sobic008G017400 Sobic001G343100--Sobic008G017400 Sobic001G343100--Sobic006G163033 Sobic006G163033--Sobic003G223600 Sobic006G163033--Sobic007G159300 Sobic006G163033--Sobic004G279900 Sobic006G174000 Sobic006G174000 Sobic006G163033--Sobic006G174000 Sobic006G163033--Sobic007G079500 Sobic006G163033--Sobic007G122866 Sobic006G163033--Sobic004G093300 Sobic006G205800 Sobic006G205800 Sobic006G163033--Sobic006G205800 Sobic006G163033--Sobic006G209200
Octagon: transcription factors


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