Gene annotation
Transcriptome id Sobic.004G271100.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RQ93
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g54580.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
2 Sobic.007G122866 - -
3 Sobic.006G163033 - -
4 Sobic.007G159300 basic helix-loop-helix, putative, expressed -
5 Sobic.008G028900 cytokinesis negative regulator RCP1, putative, expressed -
6 Sobic.006G252532 - -
7 Sobic.003G427400 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
8 Sobic.003G225000 OsFBX26 - F-box domain containing protein, expressed -
9 Sobic.002G204800 ZOS9-06 - C2H2 zinc finger protein, expressed -
10 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
11 Sobic.003G079466 - -
12 Sobic.004G044800 phytosulfokine receptor precursor, putative, expressed -
13 Sobic.002G311300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
14 Sobic.007G079500 hypothetical protein -
15 Sobic.004G279900 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
16 Sobic.004G349237 - -
17 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
18 Sobic.003G024900 carnitine racemase like protein, putative, expressed -
19 Sobic.003G319200 EF hand family protein, putative, expressed -
20 Sobic.007G047200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -


Gene co-expression network
sample Sobic004G271100 Sobic004G271100 Sobic003G076100 Sobic003G076100 Sobic004G271100--Sobic003G076100 Sobic007G122866 Sobic007G122866 Sobic004G271100--Sobic007G122866 Sobic006G163033 Sobic006G163033 Sobic004G271100--Sobic006G163033 Sobic007G159300 Sobic007G159300 Sobic004G271100--Sobic007G159300 Sobic008G028900 Sobic008G028900 Sobic004G271100--Sobic008G028900 Sobic006G252532 Sobic006G252532 Sobic004G271100--Sobic006G252532 Sobic003G427400 Sobic003G427400 Sobic004G271100--Sobic003G427400 Sobic003G225000 Sobic003G225000 Sobic004G271100--Sobic003G225000 Sobic002G204800 Sobic002G204800 Sobic004G271100--Sobic002G204800 Sobic003G076100--Sobic007G122866 Sobic003G076100--Sobic007G159300 Sobic001G052500 Sobic001G052500 Sobic003G076100--Sobic001G052500 Sobic003G076100--Sobic004G271100 Sobic003G076100--Sobic006G163033 Sobic005G103800 Sobic005G103800 Sobic003G076100--Sobic005G103800 Sobic001G206600 Sobic001G206600 Sobic003G076100--Sobic001G206600 Sobic003G277850 Sobic003G277850 Sobic003G076100--Sobic003G277850 Sobic003G076100--Sobic003G225000 Sobic007G122866--Sobic001G052500 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic004G279900 Sobic004G279900 Sobic007G122866--Sobic004G279900 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic007G122866--Sobic003G277850 Sobic006G253700 Sobic006G253700 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic003G223600 Sobic003G223600 Sobic006G163033--Sobic003G223600 Sobic006G163033--Sobic007G159300 Sobic006G163033--Sobic004G279900 Sobic006G174000 Sobic006G174000 Sobic006G163033--Sobic006G174000 Sobic007G079500 Sobic007G079500 Sobic006G163033--Sobic007G079500 Sobic006G163033--Sobic007G122866 Sobic004G093300 Sobic004G093300 Sobic006G163033--Sobic004G093300 Sobic006G205800 Sobic006G205800 Sobic006G163033--Sobic006G205800 Sobic006G209200 Sobic006G209200 Sobic006G163033--Sobic006G209200 Sobic007G159300--Sobic003G076100 Sobic007G159300--Sobic006G163033 Sobic007G159300--Sobic006G205800 Sobic007G159300--Sobic006G174000 Sobic007G159300--Sobic006G252532 Sobic007G159300--Sobic007G122866 Sobic001G501701 Sobic001G501701 Sobic007G159300--Sobic001G501701 Sobic007G159300--Sobic004G271100 Sobic007G159300--Sobic004G279900 Sobic001G339000 Sobic001G339000 Sobic008G028900--Sobic001G339000 Sobic008G028900--Sobic004G271100 Sobic009G195500 Sobic009G195500 Sobic008G028900--Sobic009G195500 Sobic001G308350 Sobic001G308350 Sobic008G028900--Sobic001G308350 Sobic008G178600 Sobic008G178600 Sobic008G028900--Sobic008G178600 Sobic003G094900 Sobic003G094900 Sobic008G028900--Sobic003G094900 Sobic008G149400 Sobic008G149400 Sobic008G028900--Sobic008G149400 Sobic003G394150 Sobic003G394150 Sobic008G028900--Sobic003G394150 Sobic010G064300 Sobic010G064300 Sobic008G028900--Sobic010G064300 Sobic007G047200 Sobic007G047200 Sobic006G252532--Sobic007G047200 Sobic003G380700 Sobic003G380700 Sobic006G252532--Sobic003G380700 Sobic009G240100 Sobic009G240100 Sobic006G252532--Sobic009G240100 Sobic008G110151 Sobic008G110151 Sobic006G252532--Sobic008G110151 Sobic006G130700 Sobic006G130700 Sobic006G252532--Sobic006G130700 Sobic003G188700 Sobic003G188700 Sobic006G252532--Sobic003G188700 Sobic003G199650 Sobic003G199650 Sobic006G252532--Sobic003G199650 Sobic010G043350 Sobic010G043350 Sobic006G252532--Sobic010G043350 Sobic006G252532--Sobic004G279900 Sobic003G427400--Sobic006G163033 Sobic003G427400--Sobic003G076100 Sobic003G427400--Sobic001G052500 Sobic003G427400--Sobic007G122866 Sobic003G427400--Sobic004G271100 Sobic001G349300 Sobic001G349300 Sobic003G427400--Sobic001G349300 Sobic003G427400--Sobic006G205800 Sobic003G314200 Sobic003G314200 Sobic003G427400--Sobic003G314200 Sobic004G338200 Sobic004G338200 Sobic003G427400--Sobic004G338200 Sobic003G079466 Sobic003G079466 Sobic003G225000--Sobic003G079466 Sobic003G225000--Sobic007G079500 Sobic003G225000--Sobic007G122866 Sobic003G225000--Sobic003G076100 Sobic003G225000--Sobic004G279900 Sobic003G225000--Sobic001G052500 Sobic003G225000--Sobic004G271100 Sobic001G343100 Sobic001G343100 Sobic003G225000--Sobic001G343100 Sobic003G225000--Sobic006G163033 Sobic002G204800--Sobic004G271100 Sobic010G036100 Sobic010G036100 Sobic002G204800--Sobic010G036100 Sobic007G181500 Sobic007G181500 Sobic002G204800--Sobic007G181500 Sobic010G229500 Sobic010G229500 Sobic002G204800--Sobic010G229500 Sobic001G039000 Sobic001G039000 Sobic002G204800--Sobic001G039000 Sobic005G196700 Sobic005G196700 Sobic002G204800--Sobic005G196700 Sobic003G039100 Sobic003G039100 Sobic002G204800--Sobic003G039100 Sobic004G034100 Sobic004G034100 Sobic002G204800--Sobic004G034100 Sobic001G015600 Sobic001G015600 Sobic002G204800--Sobic001G015600
Octagon: transcription factors


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