Gene annotation
Transcriptome id Sobic.003G319200.1
Synonym PBP1, Sb03g036610
Functional annotation EF hand family protein, putative, expressed
UniProt A0A1B6Q6I2
Pfam PF13833
Panther DB PTHR10891 PTHR10891:SF585
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54490 : pinoid-binding protein 1
RAP-DB (Rice) LOC_Os01g57470.1 : EF hand family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK10090
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G044800 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.001G124400 expressed protein -
3 Sobic.007G124400 UNE2, putative, expressed -
4 Sobic.010G083050 - -
5 Sobic.010G131950 - -
6 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
7 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
8 Sobic.002G311300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.001G360300 NAC domain-containing protein 67, putative, expressed -
10 Sobic.002G145600 expressed protein -
11 Sobic.005G096600 protein kinase domain containing protein, expressed -
12 Sobic.003G024900 carnitine racemase like protein, putative, expressed -
13 Sobic.001G207301 - -
14 Sobic.004G271100 expressed protein -
15 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.003G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
17 Sobic.K043700 - -
18 Sobic.001G097800 - -
19 Sobic.002G248800 expressed protein -
20 Sobic.003G226600 WRKY12, expressed -


Gene co-expression network
sample Sobic003G319200 Sobic003G319200 Sobic004G044800 Sobic004G044800 Sobic003G319200--Sobic004G044800 Sobic001G124400 Sobic001G124400 Sobic003G319200--Sobic001G124400 Sobic007G124400 Sobic007G124400 Sobic003G319200--Sobic007G124400 Sobic010G083050 Sobic010G083050 Sobic003G319200--Sobic010G083050 Sobic010G131950 Sobic010G131950 Sobic003G319200--Sobic010G131950 Sobic006G205800 Sobic006G205800 Sobic003G319200--Sobic006G205800 Sobic004G243000 Sobic004G243000 Sobic003G319200--Sobic004G243000 Sobic002G311300 Sobic002G311300 Sobic003G319200--Sobic002G311300 Sobic001G360300 Sobic001G360300 Sobic003G319200--Sobic001G360300 Sobic004G044800--Sobic003G319200 Sobic003G057000 Sobic003G057000 Sobic004G044800--Sobic003G057000 Sobic005G168200 Sobic005G168200 Sobic004G044800--Sobic005G168200 Sobic001G422001 Sobic001G422001 Sobic004G044800--Sobic001G422001 Sobic001G174100 Sobic001G174100 Sobic004G044800--Sobic001G174100 Sobic002G375500 Sobic002G375500 Sobic004G044800--Sobic002G375500 Sobic002G248800 Sobic002G248800 Sobic004G044800--Sobic002G248800 Sobic003G380100 Sobic003G380100 Sobic004G044800--Sobic003G380100 Sobic004G044800--Sobic010G083050 Sobic002G072050 Sobic002G072050 Sobic001G124400--Sobic002G072050 Sobic003G226600 Sobic003G226600 Sobic001G124400--Sobic003G226600 Sobic010G169950 Sobic010G169950 Sobic001G124400--Sobic010G169950 Sobic002G204050 Sobic002G204050 Sobic001G124400--Sobic002G204050 Sobic007G115700 Sobic007G115700 Sobic001G124400--Sobic007G115700 Sobic004G160350 Sobic004G160350 Sobic001G124400--Sobic004G160350 Sobic002G401533 Sobic002G401533 Sobic001G124400--Sobic002G401533 Sobic007G056300 Sobic007G056300 Sobic001G124400--Sobic007G056300 Sobic001G124400--Sobic001G360300 Sobic003G293700 Sobic003G293700 Sobic007G124400--Sobic003G293700 Sobic007G124400--Sobic003G319200 Sobic006G166700 Sobic006G166700 Sobic007G124400--Sobic006G166700 Sobic007G124400--Sobic004G243000 Sobic007G133600 Sobic007G133600 Sobic007G124400--Sobic007G133600 Sobic002G032900 Sobic002G032900 Sobic007G124400--Sobic002G032900 Sobic004G288400 Sobic004G288400 Sobic007G124400--Sobic004G288400 Sobic004G246300 Sobic004G246300 Sobic007G124400--Sobic004G246300 Sobic001G428700 Sobic001G428700 Sobic007G124400--Sobic001G428700 Sobic007G175000 Sobic007G175000 Sobic010G083050--Sobic007G175000 Sobic006G027800 Sobic006G027800 Sobic010G083050--Sobic006G027800 Sobic004G221100 Sobic004G221100 Sobic010G083050--Sobic004G221100 Sobic003G399200 Sobic003G399200 Sobic010G083050--Sobic003G399200 Sobic009G218450 Sobic009G218450 Sobic010G083050--Sobic009G218450 Sobic007G149950 Sobic007G149950 Sobic010G083050--Sobic007G149950 Sobic003G177350 Sobic003G177350 Sobic010G083050--Sobic003G177350 Sobic003G210500 Sobic003G210500 Sobic010G083050--Sobic003G210500 Sobic007G155950 Sobic007G155950 Sobic010G083050--Sobic007G155950 Sobic005G096600 Sobic005G096600 Sobic010G131950--Sobic005G096600 Sobic008G165800 Sobic008G165800 Sobic010G131950--Sobic008G165800 Sobic008G037300 Sobic008G037300 Sobic010G131950--Sobic008G037300 Sobic009G035100 Sobic009G035100 Sobic010G131950--Sobic009G035100 Sobic010G036100 Sobic010G036100 Sobic010G131950--Sobic010G036100 Sobic001G098000 Sobic001G098000 Sobic010G131950--Sobic001G098000 Sobic009G186300 Sobic009G186300 Sobic010G131950--Sobic009G186300 Sobic001G001800 Sobic001G001800 Sobic010G131950--Sobic001G001800 Sobic002G196900 Sobic002G196900 Sobic010G131950--Sobic002G196900 Sobic001G207301 Sobic001G207301 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic003G314200 Sobic003G314200 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic001G097800 Sobic001G097800 Sobic006G205800--Sobic001G097800 Sobic006G094800 Sobic006G094800 Sobic006G205800--Sobic006G094800 Sobic008G040800 Sobic008G040800 Sobic006G205800--Sobic008G040800 Sobic007G159300 Sobic007G159300 Sobic006G205800--Sobic007G159300 Sobic002G215866 Sobic002G215866 Sobic006G205800--Sobic002G215866 Sobic004G338200 Sobic004G338200 Sobic004G243000--Sobic004G338200 Sobic006G233800 Sobic006G233800 Sobic004G243000--Sobic006G233800 Sobic007G194400 Sobic007G194400 Sobic004G243000--Sobic007G194400 Sobic002G373900 Sobic002G373900 Sobic004G243000--Sobic002G373900 Sobic010G036400 Sobic010G036400 Sobic004G243000--Sobic010G036400 Sobic004G243000--Sobic003G314200 Sobic003G268800 Sobic003G268800 Sobic004G243000--Sobic003G268800 Sobic009G215400 Sobic009G215400 Sobic004G243000--Sobic009G215400 Sobic003G323800 Sobic003G323800 Sobic004G243000--Sobic003G323800 Sobic003G024900 Sobic003G024900 Sobic002G311300--Sobic003G024900 Sobic010G207250 Sobic010G207250 Sobic002G311300--Sobic010G207250 Sobic003G265150 Sobic003G265150 Sobic002G311300--Sobic003G265150 Sobic004G287000 Sobic004G287000 Sobic002G311300--Sobic004G287000 Sobic002G361600 Sobic002G361600 Sobic002G311300--Sobic002G361600 Sobic004G271100 Sobic004G271100 Sobic002G311300--Sobic004G271100 Sobic002G348500 Sobic002G348500 Sobic002G311300--Sobic002G348500 Sobic002G145600 Sobic002G145600 Sobic002G311300--Sobic002G145600 Sobic004G109300 Sobic004G109300 Sobic002G311300--Sobic004G109300 Sobic001G360300--Sobic002G072050 Sobic001G360300--Sobic004G160350 Sobic009G192450 Sobic009G192450 Sobic001G360300--Sobic009G192450 Sobic002G025100 Sobic002G025100 Sobic001G360300--Sobic002G025100 Sobic003G439200 Sobic003G439200 Sobic001G360300--Sobic003G439200 Sobic003G313600 Sobic003G313600 Sobic001G360300--Sobic003G313600 Sobic004G208000 Sobic004G208000 Sobic001G360300--Sobic004G208000 Sobic002G331050 Sobic002G331050 Sobic001G360300--Sobic002G331050 Sobic006G201450 Sobic006G201450 Sobic001G360300--Sobic006G201450
Octagon: transcription factors


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