Gene annotation
Transcriptome id Sobic.008G135100.1
Synonym Sb08g018660
Functional annotation membrane associated DUF588 domain containing protein, putative, expressed
UniProt C5YPY0
Pfam PF04535
Panther DB PTHR11615 PTHR11615:SF156
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55390 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os12g38100.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a025416
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
2 Sobic.002G239200 zinc finger, C3HC4 type domain containing protein, expressed K16285: RING/U-box domain-containing protein
3 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
4 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
5 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
6 Sobic.001G052300 expressed protein -
7 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
8 Sobic.002G036150 - -
9 Sobic.002G348500 expressed protein -
10 Sobic.009G255500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
11 Sobic.001G100600 expressed protein -
12 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
14 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
16 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
17 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
18 Sobic.007G176600 expressed protein -
19 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
20 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -


Gene co-expression network
sample Sobic008G135100 Sobic008G135100 Sobic007G074200 Sobic007G074200 Sobic008G135100--Sobic007G074200 Sobic002G239200 Sobic002G239200 Sobic008G135100--Sobic002G239200 Sobic001G447100 Sobic001G447100 Sobic008G135100--Sobic001G447100 Sobic003G349700 Sobic003G349700 Sobic008G135100--Sobic003G349700 Sobic006G165100 Sobic006G165100 Sobic008G135100--Sobic006G165100 Sobic001G052300 Sobic001G052300 Sobic008G135100--Sobic001G052300 Sobic002G359300 Sobic002G359300 Sobic008G135100--Sobic002G359300 Sobic002G036150 Sobic002G036150 Sobic008G135100--Sobic002G036150 Sobic002G348500 Sobic002G348500 Sobic008G135100--Sobic002G348500 Sobic008G111500 Sobic008G111500 Sobic007G074200--Sobic008G111500 Sobic002G393600 Sobic002G393600 Sobic007G074200--Sobic002G393600 Sobic002G338250 Sobic002G338250 Sobic007G074200--Sobic002G338250 Sobic007G074200--Sobic001G447100 Sobic004G117600 Sobic004G117600 Sobic007G074200--Sobic004G117600 Sobic009G131400 Sobic009G131400 Sobic007G074200--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic007G074200--Sobic003G146400 Sobic007G074200--Sobic003G349700 Sobic009G154200 Sobic009G154200 Sobic007G074200--Sobic009G154200 Sobic002G239200--Sobic006G165100 Sobic002G239200--Sobic001G052300 Sobic003G063200 Sobic003G063200 Sobic002G239200--Sobic003G063200 Sobic002G239200--Sobic002G359300 Sobic005G028700 Sobic005G028700 Sobic002G239200--Sobic005G028700 Sobic004G247200 Sobic004G247200 Sobic002G239200--Sobic004G247200 Sobic002G239200--Sobic004G117600 Sobic009G255500 Sobic009G255500 Sobic002G239200--Sobic009G255500 Sobic009G179500 Sobic009G179500 Sobic002G239200--Sobic009G179500 Sobic001G447100--Sobic003G349700 Sobic004G024200 Sobic004G024200 Sobic001G447100--Sobic004G024200 Sobic007G176600 Sobic007G176600 Sobic001G447100--Sobic007G176600 Sobic001G447100--Sobic008G111500 Sobic001G447100--Sobic007G074200 Sobic001G100600 Sobic001G100600 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic001G447100--Sobic009G131400 Sobic003G041200 Sobic003G041200 Sobic001G447100--Sobic003G041200 Sobic003G349700--Sobic001G447100 Sobic001G387900 Sobic001G387900 Sobic003G349700--Sobic001G387900 Sobic001G108200 Sobic001G108200 Sobic003G349700--Sobic001G108200 Sobic003G349700--Sobic001G100600 Sobic001G308300 Sobic001G308300 Sobic003G349700--Sobic001G308300 Sobic002G336600 Sobic002G336600 Sobic003G349700--Sobic002G336600 Sobic003G349700--Sobic003G041200 Sobic004G141200 Sobic004G141200 Sobic003G349700--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G349700--Sobic003G369100 Sobic002G140300 Sobic002G140300 Sobic006G165100--Sobic002G140300 Sobic003G324400 Sobic003G324400 Sobic006G165100--Sobic003G324400 Sobic001G077400 Sobic001G077400 Sobic006G165100--Sobic001G077400 Sobic006G165100--Sobic001G052300 Sobic002G036100 Sobic002G036100 Sobic006G165100--Sobic002G036100 Sobic009G036100 Sobic009G036100 Sobic006G165100--Sobic009G036100 Sobic006G165100--Sobic009G255500 Sobic004G280900 Sobic004G280900 Sobic006G165100--Sobic004G280900 Sobic009G200700 Sobic009G200700 Sobic006G165100--Sobic009G200700 Sobic001G052300--Sobic009G255500 Sobic001G052300--Sobic006G165100 Sobic001G052300--Sobic003G324400 Sobic005G037000 Sobic005G037000 Sobic001G052300--Sobic005G037000 Sobic009G183300 Sobic009G183300 Sobic001G052300--Sobic009G183300 Sobic001G052300--Sobic002G036100 Sobic001G052300--Sobic001G077400 Sobic009G217600 Sobic009G217600 Sobic001G052300--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G052300--Sobic001G441100 Sobic001G040200 Sobic001G040200 Sobic002G359300--Sobic001G040200 Sobic006G179500 Sobic006G179500 Sobic002G359300--Sobic006G179500 Sobic002G359300--Sobic002G140300 Sobic006G183400 Sobic006G183400 Sobic002G359300--Sobic006G183400 Sobic002G195900 Sobic002G195900 Sobic002G359300--Sobic002G195900 Sobic003G430400 Sobic003G430400 Sobic002G359300--Sobic003G430400 Sobic003G264500 Sobic003G264500 Sobic002G359300--Sobic003G264500 Sobic006G089300 Sobic006G089300 Sobic002G359300--Sobic006G089300 Sobic002G359300--Sobic009G183300 Sobic002G036150--Sobic002G036100 Sobic009G066800 Sobic009G066800 Sobic002G036150--Sobic009G066800 Sobic009G247300 Sobic009G247300 Sobic002G036150--Sobic009G247300 Sobic005G010200 Sobic005G010200 Sobic002G036150--Sobic005G010200 Sobic002G036150--Sobic002G359300 Sobic003G158500 Sobic003G158500 Sobic002G036150--Sobic003G158500 Sobic002G036150--Sobic009G036100 Sobic002G036150--Sobic001G040200 Sobic008G177800 Sobic008G177800 Sobic002G036150--Sobic008G177800 Sobic006G097000 Sobic006G097000 Sobic002G348500--Sobic006G097000 Sobic009G065500 Sobic009G065500 Sobic002G348500--Sobic009G065500 Sobic002G348500--Sobic001G100600 Sobic002G354100 Sobic002G354100 Sobic002G348500--Sobic002G354100 Sobic004G229800 Sobic004G229800 Sobic002G348500--Sobic004G229800 Sobic003G322900 Sobic003G322900 Sobic002G348500--Sobic003G322900 Sobic006G132900 Sobic006G132900 Sobic002G348500--Sobic006G132900 Sobic001G435000 Sobic001G435000 Sobic002G348500--Sobic001G435000 Sobic010G259500 Sobic010G259500 Sobic002G348500--Sobic010G259500
Octagon: transcription factors


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