Gene annotation
Transcriptome id Sobic.002G348500.1
Synonym Sb02g037110
Functional annotation expressed protein
UniProt C5XCB8
Pfam -
Panther DB PTHR35104 PTHR35104:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g38570.1 : expressed protein
MaizeGDB (Corn) Zm00025a014965
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G348500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G097000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
2 Sobic.009G065500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G100600 expressed protein -
4 Sobic.002G354100 transporter family protein, putative, expressed -
5 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
6 Sobic.003G322900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
8 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
9 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
10 Sobic.003G382600 ARGOS, putative, expressed -
11 Sobic.001G365100 lipase, putative, expressed -
12 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
13 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
14 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
15 Sobic.002G235500 bZIP transcription factor domain containing protein, expressed -
16 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
17 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
18 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
19 Sobic.001G108800 expressed protein -
20 Sobic.002G263400 expressed protein -


Gene co-expression network
sample Sobic002G348500 Sobic002G348500 Sobic006G097000 Sobic006G097000 Sobic002G348500--Sobic006G097000 Sobic009G065500 Sobic009G065500 Sobic002G348500--Sobic009G065500 Sobic001G100600 Sobic001G100600 Sobic002G348500--Sobic001G100600 Sobic002G354100 Sobic002G354100 Sobic002G348500--Sobic002G354100 Sobic004G229800 Sobic004G229800 Sobic002G348500--Sobic004G229800 Sobic003G322900 Sobic003G322900 Sobic002G348500--Sobic003G322900 Sobic006G132900 Sobic006G132900 Sobic002G348500--Sobic006G132900 Sobic001G435000 Sobic001G435000 Sobic002G348500--Sobic001G435000 Sobic010G259500 Sobic010G259500 Sobic002G348500--Sobic010G259500 Sobic006G097000--Sobic002G348500 Sobic006G096600 Sobic006G096600 Sobic006G097000--Sobic006G096600 Sobic001G108800 Sobic001G108800 Sobic006G097000--Sobic001G108800 Sobic001G428600 Sobic001G428600 Sobic006G097000--Sobic001G428600 Sobic004G310200 Sobic004G310200 Sobic006G097000--Sobic004G310200 Sobic003G084400 Sobic003G084400 Sobic006G097000--Sobic003G084400 Sobic006G199800 Sobic006G199800 Sobic006G097000--Sobic006G199800 Sobic001G128500 Sobic001G128500 Sobic006G097000--Sobic001G128500 Sobic001G304100 Sobic001G304100 Sobic006G097000--Sobic001G304100 Sobic003G382800 Sobic003G382800 Sobic009G065500--Sobic003G382800 Sobic003G086600 Sobic003G086600 Sobic009G065500--Sobic003G086600 Sobic003G367200 Sobic003G367200 Sobic009G065500--Sobic003G367200 Sobic001G405500 Sobic001G405500 Sobic009G065500--Sobic001G405500 Sobic004G166200 Sobic004G166200 Sobic009G065500--Sobic004G166200 Sobic004G141200 Sobic004G141200 Sobic009G065500--Sobic004G141200 Sobic004G336500 Sobic004G336500 Sobic009G065500--Sobic004G336500 Sobic009G164600 Sobic009G164600 Sobic009G065500--Sobic009G164600 Sobic005G099000 Sobic005G099000 Sobic009G065500--Sobic005G099000 Sobic001G100600--Sobic004G229800 Sobic002G336600 Sobic002G336600 Sobic001G100600--Sobic002G336600 Sobic003G349700 Sobic003G349700 Sobic001G100600--Sobic003G349700 Sobic002G192000 Sobic002G192000 Sobic001G100600--Sobic002G192000 Sobic002G140400 Sobic002G140400 Sobic001G100600--Sobic002G140400 Sobic007G036900 Sobic007G036900 Sobic001G100600--Sobic007G036900 Sobic007G074000 Sobic007G074000 Sobic001G100600--Sobic007G074000 Sobic001G100600--Sobic004G141200 Sobic001G100600--Sobic001G435000 Sobic006G277600 Sobic006G277600 Sobic002G354100--Sobic006G277600 Sobic003G117600 Sobic003G117600 Sobic002G354100--Sobic003G117600 Sobic001G231700 Sobic001G231700 Sobic002G354100--Sobic001G231700 Sobic003G382600 Sobic003G382600 Sobic002G354100--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic002G354100--Sobic002G055700 Sobic004G189400 Sobic004G189400 Sobic002G354100--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic002G354100--Sobic006G099900 Sobic002G353900 Sobic002G353900 Sobic002G354100--Sobic002G353900 Sobic005G091500 Sobic005G091500 Sobic002G354100--Sobic005G091500 Sobic004G229800--Sobic001G435000 Sobic004G229800--Sobic007G036900 Sobic001G018300 Sobic001G018300 Sobic004G229800--Sobic001G018300 Sobic004G229800--Sobic002G336600 Sobic004G229800--Sobic004G141200 Sobic002G188900 Sobic002G188900 Sobic004G229800--Sobic002G188900 Sobic004G208700 Sobic004G208700 Sobic004G229800--Sobic004G208700 Sobic004G004500 Sobic004G004500 Sobic004G229800--Sobic004G004500 Sobic004G229800--Sobic002G140400 Sobic002G263400 Sobic002G263400 Sobic003G322900--Sobic002G263400 Sobic003G322900--Sobic004G189400 Sobic002G183200 Sobic002G183200 Sobic003G322900--Sobic002G183200 Sobic004G148000 Sobic004G148000 Sobic003G322900--Sobic004G148000 Sobic003G322900--Sobic003G382600 Sobic003G322900--Sobic005G091500 Sobic003G322900--Sobic002G140400 Sobic007G155100 Sobic007G155100 Sobic003G322900--Sobic007G155100 Sobic003G307801 Sobic003G307801 Sobic003G322900--Sobic003G307801 Sobic001G502400 Sobic001G502400 Sobic006G132900--Sobic001G502400 Sobic006G234800 Sobic006G234800 Sobic006G132900--Sobic006G234800 Sobic005G107900 Sobic005G107900 Sobic006G132900--Sobic005G107900 Sobic001G313600 Sobic001G313600 Sobic006G132900--Sobic001G313600 Sobic006G132900--Sobic002G188900 Sobic006G132900--Sobic001G304100 Sobic006G132900--Sobic001G435000 Sobic006G132900--Sobic004G229800 Sobic001G238400 Sobic001G238400 Sobic006G132900--Sobic001G238400 Sobic001G435000--Sobic004G208700 Sobic001G435000--Sobic004G229800 Sobic009G159400 Sobic009G159400 Sobic001G435000--Sobic009G159400 Sobic007G155000 Sobic007G155000 Sobic001G435000--Sobic007G155000 Sobic003G345100 Sobic003G345100 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic001G435000--Sobic005G099000 Sobic008G050600 Sobic008G050600 Sobic001G435000--Sobic008G050600 Sobic001G140900 Sobic001G140900 Sobic001G435000--Sobic001G140900 Sobic001G365100 Sobic001G365100 Sobic010G259500--Sobic001G365100 Sobic001G402200 Sobic001G402200 Sobic010G259500--Sobic001G402200 Sobic007G039600 Sobic007G039600 Sobic010G259500--Sobic007G039600 Sobic003G364000 Sobic003G364000 Sobic010G259500--Sobic003G364000 Sobic010G259500--Sobic007G155100 Sobic010G259500--Sobic003G307801 Sobic010G066700 Sobic010G066700 Sobic010G259500--Sobic010G066700 Sobic010G088700 Sobic010G088700 Sobic010G259500--Sobic010G088700 Sobic005G051500 Sobic005G051500 Sobic010G259500--Sobic005G051500
Octagon: transcription factors


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