Gene annotation
Transcriptome id Sobic.006G097000.1
Synonym Sb06g018170
Functional annotation aspartic proteinase nepenthesin-2 precursor, putative, expressed
UniProt C5Y9B5
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF223
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G03200 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os04g37550.1 : aspartic proteinase nepenthesin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a056159
Brachypodium KQJ82865
Barley HORVU2Hr1G078790.3 , HORVU2Hr1G078790.2 , HORVU2Hr1G078790.1 , HORVU1Hr1G069590.1 , HORVU2Hr1G078730.5 , HORVU2Hr1G078730.4 , HORVU2Hr1G078730.1 , HORVU2Hr1G078730.3 , HORVU2Hr1G078730.2 , HORVU6Hr1G011000.2
Wheat -
Populus -


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cDNA sequences
Sobic.006G097000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G348500 expressed protein -
2 Sobic.006G096600 DUF623 domain containing protein, expressed -
3 Sobic.001G108800 expressed protein -
4 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -
5 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
6 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
7 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.001G128500 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
11 Sobic.001G272700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.003G007600 expressed protein -
13 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G354100 transporter family protein, putative, expressed -
15 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
16 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
19 Sobic.002G017800 expressed protein -
20 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -


Gene co-expression network
sample Sobic006G097000 Sobic006G097000 Sobic002G348500 Sobic002G348500 Sobic006G097000--Sobic002G348500 Sobic006G096600 Sobic006G096600 Sobic006G097000--Sobic006G096600 Sobic001G108800 Sobic001G108800 Sobic006G097000--Sobic001G108800 Sobic001G428600 Sobic001G428600 Sobic006G097000--Sobic001G428600 Sobic004G310200 Sobic004G310200 Sobic006G097000--Sobic004G310200 Sobic003G084400 Sobic003G084400 Sobic006G097000--Sobic003G084400 Sobic006G199800 Sobic006G199800 Sobic006G097000--Sobic006G199800 Sobic001G128500 Sobic001G128500 Sobic006G097000--Sobic001G128500 Sobic001G304100 Sobic001G304100 Sobic006G097000--Sobic001G304100 Sobic002G348500--Sobic006G097000 Sobic009G065500 Sobic009G065500 Sobic002G348500--Sobic009G065500 Sobic001G100600 Sobic001G100600 Sobic002G348500--Sobic001G100600 Sobic002G354100 Sobic002G354100 Sobic002G348500--Sobic002G354100 Sobic004G229800 Sobic004G229800 Sobic002G348500--Sobic004G229800 Sobic003G322900 Sobic003G322900 Sobic002G348500--Sobic003G322900 Sobic006G132900 Sobic006G132900 Sobic002G348500--Sobic006G132900 Sobic001G435000 Sobic001G435000 Sobic002G348500--Sobic001G435000 Sobic010G259500 Sobic010G259500 Sobic002G348500--Sobic010G259500 Sobic006G096600--Sobic006G097000 Sobic004G348400 Sobic004G348400 Sobic006G096600--Sobic004G348400 Sobic003G011600 Sobic003G011600 Sobic006G096600--Sobic003G011600 Sobic002G247600 Sobic002G247600 Sobic006G096600--Sobic002G247600 Sobic001G331200 Sobic001G331200 Sobic006G096600--Sobic001G331200 Sobic004G202400 Sobic004G202400 Sobic006G096600--Sobic004G202400 Sobic004G085700 Sobic004G085700 Sobic006G096600--Sobic004G085700 Sobic001G462700 Sobic001G462700 Sobic006G096600--Sobic001G462700 Sobic002G379200 Sobic002G379200 Sobic006G096600--Sobic002G379200 Sobic001G500000 Sobic001G500000 Sobic001G108800--Sobic001G500000 Sobic001G108800--Sobic004G310200 Sobic003G192100 Sobic003G192100 Sobic001G108800--Sobic003G192100 Sobic009G074100 Sobic009G074100 Sobic001G108800--Sobic009G074100 Sobic001G231700 Sobic001G231700 Sobic001G108800--Sobic001G231700 Sobic001G108800--Sobic003G084400 Sobic005G093000 Sobic005G093000 Sobic001G108800--Sobic005G093000 Sobic001G192600 Sobic001G192600 Sobic001G108800--Sobic001G192600 Sobic004G340900 Sobic004G340900 Sobic001G108800--Sobic004G340900 Sobic006G202600 Sobic006G202600 Sobic001G428600--Sobic006G202600 Sobic001G508532 Sobic001G508532 Sobic001G428600--Sobic001G508532 Sobic001G237900 Sobic001G237900 Sobic001G428600--Sobic001G237900 Sobic010G196000 Sobic010G196000 Sobic001G428600--Sobic010G196000 Sobic008G127933 Sobic008G127933 Sobic001G428600--Sobic008G127933 Sobic005G213600 Sobic005G213600 Sobic001G428600--Sobic005G213600 Sobic003G053300 Sobic003G053300 Sobic001G428600--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G428600--Sobic006G158400 Sobic010G158500 Sobic010G158500 Sobic001G428600--Sobic010G158500 Sobic002G003800 Sobic002G003800 Sobic004G310200--Sobic002G003800 Sobic003G311800 Sobic003G311800 Sobic004G310200--Sobic003G311800 Sobic004G042000 Sobic004G042000 Sobic004G310200--Sobic004G042000 Sobic004G310200--Sobic001G304100 Sobic001G049900 Sobic001G049900 Sobic004G310200--Sobic001G049900 Sobic004G310200--Sobic001G500000 Sobic010G252401 Sobic010G252401 Sobic004G310200--Sobic010G252401 Sobic002G213600 Sobic002G213600 Sobic004G310200--Sobic002G213600 Sobic004G310200--Sobic003G084400 Sobic005G011300 Sobic005G011300 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic004G046200 Sobic004G046200 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic001G367600 Sobic001G367600 Sobic003G084400--Sobic001G367600 Sobic005G107900 Sobic005G107900 Sobic003G084400--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic006G199800--Sobic004G046200 Sobic010G259600 Sobic010G259600 Sobic006G199800--Sobic010G259600 Sobic003G255200 Sobic003G255200 Sobic006G199800--Sobic003G255200 Sobic009G183400 Sobic009G183400 Sobic006G199800--Sobic009G183400 Sobic006G199800--Sobic003G084400 Sobic007G169900 Sobic007G169900 Sobic006G199800--Sobic007G169900 Sobic003G255500 Sobic003G255500 Sobic006G199800--Sobic003G255500 Sobic006G044100 Sobic006G044100 Sobic006G199800--Sobic006G044100 Sobic006G199800--Sobic001G231700 Sobic009G187200 Sobic009G187200 Sobic001G128500--Sobic009G187200 Sobic001G128500--Sobic004G046200 Sobic001G128500--Sobic004G202400 Sobic008G172600 Sobic008G172600 Sobic001G128500--Sobic008G172600 Sobic006G197100 Sobic006G197100 Sobic001G128500--Sobic006G197100 Sobic001G128500--Sobic006G199800 Sobic001G128500--Sobic003G084400 Sobic003G053400 Sobic003G053400 Sobic001G128500--Sobic003G053400 Sobic001G128500--Sobic002G003800 Sobic009G188000 Sobic009G188000 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800
Octagon: transcription factors


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