Gene annotation
Transcriptome id Sobic.001G272700.1
Synonym Sb01g026700
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5WPS9
Pfam PF12937
Panther DB PTHR34791 PTHR34791:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g04020.1 : OsFBX356 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054145 , Zm00025a018013 , Zm00025a018014
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
2 Sobic.008G172600 ATCHX, putative, expressed -
3 Sobic.003G255500 expressed protein -
4 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
5 Sobic.010G063000 - -
6 Sobic.006G197100 DNA binding protein, putative, expressed -
7 Sobic.003G255200 expressed protein -
8 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
9 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
10 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
11 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
12 Sobic.010G185000 VQ domain containing protein, putative, expressed -
13 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.006G125100 ubiquitin family protein, putative, expressed -
15 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
16 Sobic.003G363900 glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.002G017800 expressed protein -
18 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.004G349125 - -
20 Sobic.003G368600 terpene synthase, putative, expressed -


Gene co-expression network
sample Sobic001G272700 Sobic001G272700 Sobic004G202400 Sobic004G202400 Sobic001G272700--Sobic004G202400 Sobic008G172600 Sobic008G172600 Sobic001G272700--Sobic008G172600 Sobic003G255500 Sobic003G255500 Sobic001G272700--Sobic003G255500 Sobic004G046200 Sobic004G046200 Sobic001G272700--Sobic004G046200 Sobic010G063000 Sobic010G063000 Sobic001G272700--Sobic010G063000 Sobic006G197100 Sobic006G197100 Sobic001G272700--Sobic006G197100 Sobic003G255200 Sobic003G255200 Sobic001G272700--Sobic003G255200 Sobic001G325400 Sobic001G325400 Sobic001G272700--Sobic001G325400 Sobic004G042000 Sobic004G042000 Sobic001G272700--Sobic004G042000 Sobic004G202400--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic004G202400--Sobic001G416200 Sobic001G237900 Sobic001G237900 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G349125 Sobic004G349125 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic002G042200 Sobic002G042200 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800 Sobic009G187200 Sobic009G187200 Sobic008G172600--Sobic009G187200 Sobic008G172600--Sobic003G255200 Sobic002G004900 Sobic002G004900 Sobic008G172600--Sobic002G004900 Sobic008G172600--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic008G172600--Sobic006G044100 Sobic003G280200 Sobic003G280200 Sobic008G172600--Sobic003G280200 Sobic008G172600--Sobic001G325400 Sobic001G503100 Sobic001G503100 Sobic008G172600--Sobic001G503100 Sobic002G125700 Sobic002G125700 Sobic008G172600--Sobic002G125700 Sobic003G255500--Sobic001G503100 Sobic003G255500--Sobic003G255200 Sobic006G199800 Sobic006G199800 Sobic003G255500--Sobic006G199800 Sobic001G449600 Sobic001G449600 Sobic003G255500--Sobic001G449600 Sobic003G255500--Sobic006G044100 Sobic003G255500--Sobic009G187200 Sobic004G107700 Sobic004G107700 Sobic003G255500--Sobic004G107700 Sobic004G348400 Sobic004G348400 Sobic003G255500--Sobic004G348400 Sobic001G161500 Sobic001G161500 Sobic003G255500--Sobic001G161500 Sobic008G106700 Sobic008G106700 Sobic004G046200--Sobic008G106700 Sobic004G046200--Sobic006G044100 Sobic004G046200--Sobic009G187200 Sobic004G046200--Sobic006G199800 Sobic003G084400 Sobic003G084400 Sobic004G046200--Sobic003G084400 Sobic004G046200--Sobic003G255200 Sobic001G500000 Sobic001G500000 Sobic004G046200--Sobic001G500000 Sobic003G079400 Sobic003G079400 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic006G125100 Sobic006G125100 Sobic010G063000--Sobic006G125100 Sobic010G063000--Sobic002G125700 Sobic002G213600 Sobic002G213600 Sobic010G063000--Sobic002G213600 Sobic010G063000--Sobic001G237900 Sobic010G063000--Sobic001G503100 Sobic010G001000 Sobic010G001000 Sobic010G063000--Sobic010G001000 Sobic010G063000--Sobic001G161500 Sobic001G318500 Sobic001G318500 Sobic010G063000--Sobic001G318500 Sobic010G063000--Sobic001G325400 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic003G255200--Sobic008G172600 Sobic003G255200--Sobic004G046200 Sobic010G259600 Sobic010G259600 Sobic003G255200--Sobic010G259600 Sobic003G255200--Sobic001G449600 Sobic007G087200 Sobic007G087200 Sobic003G255200--Sobic007G087200 Sobic003G255200--Sobic001G503100 Sobic002G034800 Sobic002G034800 Sobic003G255200--Sobic002G034800 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic001G325400--Sobic009G111000 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic009G077800 Sobic009G077800 Sobic001G325400--Sobic009G077800 Sobic002G017800 Sobic002G017800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic001G302600 Sobic001G302600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000
Octagon: transcription factors


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