Gene annotation
Transcriptome id Sobic.006G031400.1
Synonym Sb06g003210
Functional annotation expressed protein
UniProt C5YD86
Pfam -
Panther DB PTHR31016 PTHR31016:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02800 : -
RAP-DB (Rice) LOC_Os04g15800.1 : expressed protein
MaizeGDB (Corn) Zm00025a011971
Brachypodium KQJ81955
Barley -
Wheat TraesCS2B02G079600 , TraesCS2D02G065700 , TraesCS2A02G067400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G296000 expressed protein -
2 Sobic.010G101100 E2F family transcription factor protein, putative, expressed -
3 Sobic.001G088000 expressed protein -
4 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
5 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
6 Sobic.009G157600 DUF740 domain containing protein, expressed -
7 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
8 Sobic.002G113600 rhoGAP domain containing protein, expressed -
9 Sobic.001G230300 shugoshin-1, putative, expressed -
10 Sobic.005G164900 expressed protein -
11 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
13 Sobic.006G102900 expressed protein -
14 Sobic.009G208900 expressed protein -
15 Sobic.010G261200 LTPL86 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G345700 OsSCP5 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
17 Sobic.001G091500 expressed protein -
18 Sobic.001G261549 - -
19 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
20 Sobic.004G170500 histone H3, putative, expressed K11253: histone H3


Gene co-expression network
sample Sobic006G031400 Sobic006G031400 Sobic001G296000 Sobic001G296000 Sobic006G031400--Sobic001G296000 Sobic010G101100 Sobic010G101100 Sobic006G031400--Sobic010G101100 Sobic001G088000 Sobic001G088000 Sobic006G031400--Sobic001G088000 Sobic009G120700 Sobic009G120700 Sobic006G031400--Sobic009G120700 Sobic004G047100 Sobic004G047100 Sobic006G031400--Sobic004G047100 Sobic009G157600 Sobic009G157600 Sobic006G031400--Sobic009G157600 Sobic001G078600 Sobic001G078600 Sobic006G031400--Sobic001G078600 Sobic002G113600 Sobic002G113600 Sobic006G031400--Sobic002G113600 Sobic001G230300 Sobic001G230300 Sobic006G031400--Sobic001G230300 Sobic001G296000--Sobic009G120700 Sobic001G296000--Sobic006G031400 Sobic001G091500 Sobic001G091500 Sobic001G296000--Sobic001G091500 Sobic002G426800 Sobic002G426800 Sobic001G296000--Sobic002G426800 Sobic001G296000--Sobic002G113600 Sobic005G164900 Sobic005G164900 Sobic001G296000--Sobic005G164900 Sobic004G132900 Sobic004G132900 Sobic001G296000--Sobic004G132900 Sobic001G296000--Sobic001G088000 Sobic001G296000--Sobic001G230300 Sobic004G217450 Sobic004G217450 Sobic010G101100--Sobic004G217450 Sobic010G101100--Sobic006G031400 Sobic002G385400 Sobic002G385400 Sobic010G101100--Sobic002G385400 Sobic003G034600 Sobic003G034600 Sobic010G101100--Sobic003G034600 Sobic003G279100 Sobic003G279100 Sobic010G101100--Sobic003G279100 Sobic003G345700 Sobic003G345700 Sobic010G101100--Sobic003G345700 Sobic003G125332 Sobic003G125332 Sobic010G101100--Sobic003G125332 Sobic003G276500 Sobic003G276500 Sobic010G101100--Sobic003G276500 Sobic002G074200 Sobic002G074200 Sobic010G101100--Sobic002G074200 Sobic001G088000--Sobic005G164900 Sobic001G088000--Sobic006G031400 Sobic001G088000--Sobic002G113600 Sobic002G074500 Sobic002G074500 Sobic001G088000--Sobic002G074500 Sobic001G088000--Sobic001G296000 Sobic003G092000 Sobic003G092000 Sobic001G088000--Sobic003G092000 Sobic010G078400 Sobic010G078400 Sobic001G088000--Sobic010G078400 Sobic006G137300 Sobic006G137300 Sobic001G088000--Sobic006G137300 Sobic001G221601 Sobic001G221601 Sobic001G088000--Sobic001G221601 Sobic009G120700--Sobic001G091500 Sobic010G119300 Sobic010G119300 Sobic009G120700--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic009G120700--Sobic003G102000 Sobic003G328500 Sobic003G328500 Sobic009G120700--Sobic003G328500 Sobic003G387700 Sobic003G387700 Sobic009G120700--Sobic003G387700 Sobic009G120700--Sobic002G426800 Sobic007G100600 Sobic007G100600 Sobic009G120700--Sobic007G100600 Sobic009G120700--Sobic001G230300 Sobic007G132900 Sobic007G132900 Sobic009G120700--Sobic007G132900 Sobic010G105400 Sobic010G105400 Sobic004G047100--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic004G047100--Sobic005G144600 Sobic009G181500 Sobic009G181500 Sobic004G047100--Sobic009G181500 Sobic002G246900 Sobic002G246900 Sobic004G047100--Sobic002G246900 Sobic004G047100--Sobic002G426800 Sobic003G179500 Sobic003G179500 Sobic004G047100--Sobic003G179500 Sobic004G047100--Sobic001G091500 Sobic006G116500 Sobic006G116500 Sobic004G047100--Sobic006G116500 Sobic004G047100--Sobic003G387700 Sobic010G227200 Sobic010G227200 Sobic009G157600--Sobic010G227200 Sobic009G157600--Sobic004G047100 Sobic002G230800 Sobic002G230800 Sobic009G157600--Sobic002G230800 Sobic003G107200 Sobic003G107200 Sobic009G157600--Sobic003G107200 Sobic006G138900 Sobic006G138900 Sobic009G157600--Sobic006G138900 Sobic006G081800 Sobic006G081800 Sobic009G157600--Sobic006G081800 Sobic001G255600 Sobic001G255600 Sobic009G157600--Sobic001G255600 Sobic009G157600--Sobic001G091500 Sobic009G157600--Sobic009G120700 Sobic006G102900 Sobic006G102900 Sobic001G078600--Sobic006G102900 Sobic001G078600--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic001G078600--Sobic010G274000 Sobic001G078600--Sobic005G144600 Sobic004G197400 Sobic004G197400 Sobic001G078600--Sobic004G197400 Sobic004G285900 Sobic004G285900 Sobic001G078600--Sobic004G285900 Sobic001G078600--Sobic006G116500 Sobic001G528600 Sobic001G528600 Sobic001G078600--Sobic001G528600 Sobic007G154500 Sobic007G154500 Sobic001G078600--Sobic007G154500 Sobic002G113600--Sobic005G164900 Sobic006G215200 Sobic006G215200 Sobic002G113600--Sobic006G215200 Sobic008G093600 Sobic008G093600 Sobic002G113600--Sobic008G093600 Sobic003G008700 Sobic003G008700 Sobic002G113600--Sobic003G008700 Sobic002G224200 Sobic002G224200 Sobic002G113600--Sobic002G224200 Sobic008G114900 Sobic008G114900 Sobic002G113600--Sobic008G114900 Sobic004G339500 Sobic004G339500 Sobic002G113600--Sobic004G339500 Sobic007G168900 Sobic007G168900 Sobic002G113600--Sobic007G168900 Sobic003G043900 Sobic003G043900 Sobic002G113600--Sobic003G043900 Sobic001G230300--Sobic001G091500 Sobic001G230300--Sobic003G387700 Sobic001G230300--Sobic008G114900 Sobic001G230300--Sobic003G102000 Sobic001G230300--Sobic004G339500 Sobic001G230300--Sobic010G119300 Sobic003G260700 Sobic003G260700 Sobic001G230300--Sobic003G260700 Sobic008G125700 Sobic008G125700 Sobic001G230300--Sobic008G125700 Sobic002G222500 Sobic002G222500 Sobic001G230300--Sobic002G222500
Octagon: transcription factors


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