Gene annotation
Transcriptome id Sobic.002G113600.1
Synonym Sb02g009710
Functional annotation rhoGAP domain containing protein, expressed
UniProt C5X4B1
Pfam PF00786 PF00620
Panther DB PTHR23177 PTHR23177:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT4G03100 : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
RAP-DB (Rice) LOC_Os07g22580.1 : rhoGAP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045713
Brachypodium PNT64173 , KQK20113 , KQJ89405 , KQJ89404 , KQJ89407 , KQJ89406 , KQJ86502
Barley HORVU7Hr1G096830.3 , HORVU7Hr1G096830.2 , HORVU7Hr1G096830.1 , HORVU7Hr1G096830.6 , HORVU7Hr1G096830.5 , HORVU7Hr1G096830.4 , HORVU5Hr1G026250.1 , HORVU5Hr1G026250.2 , HORVU2Hr1G010860.10 , HORVU2Hr1G010860.3 , HORVU2Hr1G010860.2 , HORVU2Hr1G010860.1 , HORVU2Hr1G010860.7 , HORVU2Hr1G010860.6 , HORVU2Hr1G010860.5 , HORVU2Hr1G010860.4 , HORVU2Hr1G010860.9 , HORVU2Hr1G010860.8 , HORVU3Hr1G113170.6 , HORVU3Hr1G113170.4 , HORVU3Hr1G113170.5 , HORVU3Hr1G113170.2 , HORVU3Hr1G113170.3 , HORVU3Hr1G113170.1
Wheat TraesCS5B02G102900 , TraesCS4D02G115300 , TraesCS2D02G064800 , TraesCS2A02G066300 , TraesCS5A02G097200 , TraesCS3A02G517400 , TraesCS2B02G078400 , TraesCS5D02G109700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G164900 expressed protein -
2 Sobic.006G215200 caltractin, putative, expressed -
3 Sobic.008G093600 expressed protein -
4 Sobic.003G008700 MYB family transcription factor, putative, expressed -
5 Sobic.002G224200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
6 Sobic.008G114900 rhoGAP domain containing protein, expressed -
7 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
8 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
9 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
10 Sobic.001G352300 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
11 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
12 Sobic.001G088000 expressed protein -
13 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
14 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.004G020600 ATXR, putative, expressed -
16 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
17 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
18 Sobic.001G540200 PAIR1, putative, expressed -
19 Sobic.009G185900 expressed protein -
20 Sobic.001G230300 shugoshin-1, putative, expressed -


Gene co-expression network
sample Sobic002G113600 Sobic002G113600 Sobic005G164900 Sobic005G164900 Sobic002G113600--Sobic005G164900 Sobic006G215200 Sobic006G215200 Sobic002G113600--Sobic006G215200 Sobic008G093600 Sobic008G093600 Sobic002G113600--Sobic008G093600 Sobic003G008700 Sobic003G008700 Sobic002G113600--Sobic003G008700 Sobic002G224200 Sobic002G224200 Sobic002G113600--Sobic002G224200 Sobic008G114900 Sobic008G114900 Sobic002G113600--Sobic008G114900 Sobic004G339500 Sobic004G339500 Sobic002G113600--Sobic004G339500 Sobic007G168900 Sobic007G168900 Sobic002G113600--Sobic007G168900 Sobic003G043900 Sobic003G043900 Sobic002G113600--Sobic003G043900 Sobic005G164900--Sobic002G113600 Sobic005G164900--Sobic004G339500 Sobic005G164900--Sobic008G114900 Sobic005G164900--Sobic003G008700 Sobic005G164900--Sobic006G215200 Sobic001G230300 Sobic001G230300 Sobic005G164900--Sobic001G230300 Sobic001G091500 Sobic001G091500 Sobic005G164900--Sobic001G091500 Sobic008G006800 Sobic008G006800 Sobic005G164900--Sobic008G006800 Sobic001G540200 Sobic001G540200 Sobic005G164900--Sobic001G540200 Sobic006G215200--Sobic005G164900 Sobic006G215200--Sobic002G113600 Sobic001G352300 Sobic001G352300 Sobic006G215200--Sobic001G352300 Sobic004G020600 Sobic004G020600 Sobic006G215200--Sobic004G020600 Sobic002G142200 Sobic002G142200 Sobic006G215200--Sobic002G142200 Sobic010G017400 Sobic010G017400 Sobic006G215200--Sobic010G017400 Sobic010G008900 Sobic010G008900 Sobic006G215200--Sobic010G008900 Sobic006G215200--Sobic004G339500 Sobic006G215200--Sobic007G168900 Sobic002G319300 Sobic002G319300 Sobic008G093600--Sobic002G319300 Sobic001G155700 Sobic001G155700 Sobic008G093600--Sobic001G155700 Sobic002G360500 Sobic002G360500 Sobic008G093600--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic008G093600--Sobic002G417000 Sobic002G313000 Sobic002G313000 Sobic008G093600--Sobic002G313000 Sobic010G211800 Sobic010G211800 Sobic008G093600--Sobic010G211800 Sobic003G307200 Sobic003G307200 Sobic008G093600--Sobic003G307200 Sobic002G394500 Sobic002G394500 Sobic008G093600--Sobic002G394500 Sobic008G093600--Sobic008G006800 Sobic001G170800 Sobic001G170800 Sobic003G008700--Sobic001G170800 Sobic004G047100 Sobic004G047100 Sobic003G008700--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic003G008700--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic003G008700--Sobic005G000500 Sobic005G110535 Sobic005G110535 Sobic003G008700--Sobic005G110535 Sobic010G105400 Sobic010G105400 Sobic003G008700--Sobic010G105400 Sobic008G148000 Sobic008G148000 Sobic003G008700--Sobic008G148000 Sobic003G444100 Sobic003G444100 Sobic003G008700--Sobic003G444100 Sobic001G398400 Sobic001G398400 Sobic003G008700--Sobic001G398400 Sobic005G091000 Sobic005G091000 Sobic002G224200--Sobic005G091000 Sobic001G381100 Sobic001G381100 Sobic002G224200--Sobic001G381100 Sobic006G105600 Sobic006G105600 Sobic002G224200--Sobic006G105600 Sobic004G168600 Sobic004G168600 Sobic002G224200--Sobic004G168600 Sobic001G267100 Sobic001G267100 Sobic002G224200--Sobic001G267100 Sobic006G074900 Sobic006G074900 Sobic002G224200--Sobic006G074900 Sobic002G224200--Sobic002G394500 Sobic008G190000 Sobic008G190000 Sobic002G224200--Sobic008G190000 Sobic001G160000 Sobic001G160000 Sobic002G224200--Sobic001G160000 Sobic008G125700 Sobic008G125700 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic008G114900--Sobic001G155700 Sobic010G119300 Sobic010G119300 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic003G260700 Sobic003G260700 Sobic008G114900--Sobic003G260700 Sobic001G493900 Sobic001G493900 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic001G177900 Sobic001G177900 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic004G339500--Sobic003G102000 Sobic004G198100 Sobic004G198100 Sobic004G339500--Sobic004G198100 Sobic004G339500--Sobic008G125700 Sobic005G005700 Sobic005G005700 Sobic004G339500--Sobic005G005700 Sobic007G168900--Sobic005G000500 Sobic005G144600 Sobic005G144600 Sobic007G168900--Sobic005G144600 Sobic004G271300 Sobic004G271300 Sobic007G168900--Sobic004G271300 Sobic007G168900--Sobic001G177900 Sobic003G314900 Sobic003G314900 Sobic007G168900--Sobic003G314900 Sobic003G294500 Sobic003G294500 Sobic007G168900--Sobic003G294500 Sobic007G168900--Sobic003G260700 Sobic007G168900--Sobic010G008900 Sobic010G147700 Sobic010G147700 Sobic007G168900--Sobic010G147700 Sobic001G109700 Sobic001G109700 Sobic003G043900--Sobic001G109700 Sobic002G296000 Sobic002G296000 Sobic003G043900--Sobic002G296000 Sobic007G125300 Sobic007G125300 Sobic003G043900--Sobic007G125300 Sobic001G304800 Sobic001G304800 Sobic003G043900--Sobic001G304800 Sobic003G043900--Sobic005G110535 Sobic009G146250 Sobic009G146250 Sobic003G043900--Sobic009G146250 Sobic003G043900--Sobic003G008700 Sobic004G156200 Sobic004G156200 Sobic003G043900--Sobic004G156200 Sobic009G101100 Sobic009G101100 Sobic003G043900--Sobic009G101100
Octagon: transcription factors


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