Gene annotation
Transcriptome id Sobic.006G215200.3,Sobic.006G215200.2,Sobic.006G215200.1
Synonym Sb06g028540
Functional annotation caltractin, putative, expressed
UniProt A0A1Z5REY6 , C5YG15 , A0A1Z5RF08
Pfam -
Panther DB PTHR36790
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g25620.1 : caltractin, putative, expressed
MaizeGDB (Corn) Zm00025a043275
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G164900 expressed protein -
2 Sobic.002G113600 rhoGAP domain containing protein, expressed -
3 Sobic.001G352300 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
4 Sobic.004G020600 ATXR, putative, expressed -
5 Sobic.002G142200 expressed protein -
6 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
7 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
8 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
9 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
10 Sobic.003G008700 MYB family transcription factor, putative, expressed -
11 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
12 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
13 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
14 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
15 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
16 Sobic.001G029800 expressed protein -
17 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
18 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
20 Sobic.002G296000 HEAT repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic006G215200 Sobic006G215200 Sobic005G164900 Sobic005G164900 Sobic006G215200--Sobic005G164900 Sobic002G113600 Sobic002G113600 Sobic006G215200--Sobic002G113600 Sobic001G352300 Sobic001G352300 Sobic006G215200--Sobic001G352300 Sobic004G020600 Sobic004G020600 Sobic006G215200--Sobic004G020600 Sobic002G142200 Sobic002G142200 Sobic006G215200--Sobic002G142200 Sobic010G017400 Sobic010G017400 Sobic006G215200--Sobic010G017400 Sobic010G008900 Sobic010G008900 Sobic006G215200--Sobic010G008900 Sobic004G339500 Sobic004G339500 Sobic006G215200--Sobic004G339500 Sobic007G168900 Sobic007G168900 Sobic006G215200--Sobic007G168900 Sobic005G164900--Sobic002G113600 Sobic005G164900--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic005G164900--Sobic008G114900 Sobic003G008700 Sobic003G008700 Sobic005G164900--Sobic003G008700 Sobic005G164900--Sobic006G215200 Sobic001G230300 Sobic001G230300 Sobic005G164900--Sobic001G230300 Sobic001G091500 Sobic001G091500 Sobic005G164900--Sobic001G091500 Sobic008G006800 Sobic008G006800 Sobic005G164900--Sobic008G006800 Sobic001G540200 Sobic001G540200 Sobic005G164900--Sobic001G540200 Sobic002G113600--Sobic005G164900 Sobic002G113600--Sobic006G215200 Sobic008G093600 Sobic008G093600 Sobic002G113600--Sobic008G093600 Sobic002G113600--Sobic003G008700 Sobic002G224200 Sobic002G224200 Sobic002G113600--Sobic002G224200 Sobic002G113600--Sobic008G114900 Sobic002G113600--Sobic004G339500 Sobic002G113600--Sobic007G168900 Sobic003G043900 Sobic003G043900 Sobic002G113600--Sobic003G043900 Sobic003G260700 Sobic003G260700 Sobic001G352300--Sobic003G260700 Sobic001G352300--Sobic007G168900 Sobic004G257600 Sobic004G257600 Sobic001G352300--Sobic004G257600 Sobic009G184200 Sobic009G184200 Sobic001G352300--Sobic009G184200 Sobic004G198100 Sobic004G198100 Sobic001G352300--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic001G352300--Sobic004G271300 Sobic005G144600 Sobic005G144600 Sobic001G352300--Sobic005G144600 Sobic001G352300--Sobic001G091500 Sobic002G222500 Sobic002G222500 Sobic001G352300--Sobic002G222500 Sobic009G087000 Sobic009G087000 Sobic004G020600--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic004G020600--Sobic010G147700 Sobic004G355500 Sobic004G355500 Sobic004G020600--Sobic004G355500 Sobic001G456500 Sobic001G456500 Sobic004G020600--Sobic001G456500 Sobic010G103700 Sobic010G103700 Sobic004G020600--Sobic010G103700 Sobic006G116500 Sobic006G116500 Sobic004G020600--Sobic006G116500 Sobic003G361200 Sobic003G361200 Sobic004G020600--Sobic003G361200 Sobic003G183700 Sobic003G183700 Sobic004G020600--Sobic003G183700 Sobic004G331600 Sobic004G331600 Sobic004G020600--Sobic004G331600 Sobic002G142200--Sobic007G168900 Sobic002G142200--Sobic010G017400 Sobic001G177900 Sobic001G177900 Sobic002G142200--Sobic001G177900 Sobic001G029800 Sobic001G029800 Sobic002G142200--Sobic001G029800 Sobic002G142200--Sobic005G144600 Sobic004G287700 Sobic004G287700 Sobic002G142200--Sobic004G287700 Sobic003G294500 Sobic003G294500 Sobic002G142200--Sobic003G294500 Sobic003G314900 Sobic003G314900 Sobic002G142200--Sobic003G314900 Sobic009G208900 Sobic009G208900 Sobic002G142200--Sobic009G208900 Sobic010G017400--Sobic008G006800 Sobic005G005700 Sobic005G005700 Sobic010G017400--Sobic005G005700 Sobic002G296000 Sobic002G296000 Sobic010G017400--Sobic002G296000 Sobic001G170800 Sobic001G170800 Sobic010G017400--Sobic001G170800 Sobic010G017400--Sobic001G177900 Sobic001G398400 Sobic001G398400 Sobic010G017400--Sobic001G398400 Sobic010G017400--Sobic004G271300 Sobic010G017400--Sobic007G168900 Sobic010G017400--Sobic010G008900 Sobic005G000500 Sobic005G000500 Sobic010G008900--Sobic005G000500 Sobic010G008900--Sobic003G314900 Sobic010G008900--Sobic001G170800 Sobic010G008900--Sobic007G168900 Sobic010G008900--Sobic001G029800 Sobic010G008900--Sobic001G177900 Sobic010G008900--Sobic003G294500 Sobic010G008900--Sobic004G271300 Sobic008G148000 Sobic008G148000 Sobic010G008900--Sobic008G148000 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic010G119300 Sobic010G119300 Sobic004G339500--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic008G125700 Sobic008G125700 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700 Sobic007G168900--Sobic005G000500 Sobic007G168900--Sobic005G144600 Sobic007G168900--Sobic004G271300 Sobic007G168900--Sobic001G177900 Sobic007G168900--Sobic003G314900 Sobic007G168900--Sobic003G294500 Sobic007G168900--Sobic003G260700 Sobic007G168900--Sobic010G008900 Sobic007G168900--Sobic010G147700
Octagon: transcription factors


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