Gene annotation
Transcriptome id Sobic.003G008700.1,Sobic.003G008700.3,Sobic.003G008700.2
Synonym MYB3R1, Sb03g000930, PC-MYB1, ATMYB3R-1, MYB3R-1, ATMYB3R1
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1W0VVA1 , A0A1W0VV97 , A0A1B6Q0P3
Pfam PF13921 PF00249
Panther DB PTHR10641 PTHR10641:SF599
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32730 : Homeodomain-like protein
RAP-DB (Rice) LOC_Os12g13570.1,LOC_Os01g12860.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a022834
Brachypodium KQK03407
Barley HORVU3Hr1G031320.17 , HORVU3Hr1G031320.14 , HORVU3Hr1G031320.15 , HORVU3Hr1G031320.12 , HORVU3Hr1G031320.13 , HORVU3Hr1G031320.10 , HORVU3Hr1G031320.11 , HORVU3Hr1G031320.18 , HORVU3Hr1G031320.19 , HORVU3Hr1G031320.28 , HORVU3Hr1G031320.26 , HORVU3Hr1G031320.25 , HORVU3Hr1G031320.23 , HORVU3Hr1G031320.22 , HORVU3Hr1G031320.21 , HORVU3Hr1G031320.4 , HORVU3Hr1G031320.1 , HORVU3Hr1G031320.3 , HORVU3Hr1G031320.5 , HORVU3Hr1G031320.6 , HORVU3Hr1G031320.7 , HORVU3Hr1G031320.8 , HORVU3Hr1G031320.9 , HORVU3Hr1G031320.2
Wheat TraesCS3D02G161100 , TraesCS3D02G161100 , TraesCS3A02G153700 , TraesCS3B02G180300 , TraesCS1D02G125400 , TraesCS1B02G147800
Populus -


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cDNA sequences
Sobic.003G008700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
2 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
3 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
4 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
5 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
6 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
7 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
8 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
9 Sobic.001G398400 expressed protein -
10 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
11 Sobic.005G164900 expressed protein -
12 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
13 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
14 Sobic.004G063600 CYPRO4, putative, expressed -
15 Sobic.002G113400 dnaJ domain containing protein, expressed -
16 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
18 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
19 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
20 Sobic.003G314900 flap endonuclease, putative, expressed K10746: exonuclease 1


Gene co-expression network
sample Sobic003G008700 Sobic003G008700 Sobic001G170800 Sobic001G170800 Sobic003G008700--Sobic001G170800 Sobic004G047100 Sobic004G047100 Sobic003G008700--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic003G008700--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic003G008700--Sobic005G000500 Sobic005G110535 Sobic005G110535 Sobic003G008700--Sobic005G110535 Sobic010G105400 Sobic010G105400 Sobic003G008700--Sobic010G105400 Sobic008G148000 Sobic008G148000 Sobic003G008700--Sobic008G148000 Sobic003G444100 Sobic003G444100 Sobic003G008700--Sobic003G444100 Sobic001G398400 Sobic001G398400 Sobic003G008700--Sobic001G398400 Sobic001G170800--Sobic005G000500 Sobic003G260700 Sobic003G260700 Sobic001G170800--Sobic003G260700 Sobic001G170800--Sobic003G444100 Sobic001G170800--Sobic001G398400 Sobic004G271300 Sobic004G271300 Sobic001G170800--Sobic004G271300 Sobic001G170800--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic001G170800--Sobic010G008900 Sobic001G177900 Sobic001G177900 Sobic001G170800--Sobic001G177900 Sobic004G339500 Sobic004G339500 Sobic001G170800--Sobic004G339500 Sobic004G047100--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic004G047100--Sobic005G144600 Sobic009G181500 Sobic009G181500 Sobic004G047100--Sobic009G181500 Sobic002G246900 Sobic002G246900 Sobic004G047100--Sobic002G246900 Sobic002G426800 Sobic002G426800 Sobic004G047100--Sobic002G426800 Sobic003G179500 Sobic003G179500 Sobic004G047100--Sobic003G179500 Sobic001G091500 Sobic001G091500 Sobic004G047100--Sobic001G091500 Sobic006G116500 Sobic006G116500 Sobic004G047100--Sobic006G116500 Sobic003G387700 Sobic003G387700 Sobic004G047100--Sobic003G387700 Sobic002G204400 Sobic002G204400 Sobic009G184200--Sobic002G204400 Sobic009G184200--Sobic010G105400 Sobic009G184200--Sobic001G398400 Sobic003G393100 Sobic003G393100 Sobic009G184200--Sobic003G393100 Sobic010G129700 Sobic010G129700 Sobic009G184200--Sobic010G129700 Sobic003G032200 Sobic003G032200 Sobic009G184200--Sobic003G032200 Sobic009G184200--Sobic001G170800 Sobic007G007800 Sobic007G007800 Sobic009G184200--Sobic007G007800 Sobic009G184200--Sobic003G260700 Sobic007G168900 Sobic007G168900 Sobic005G000500--Sobic007G168900 Sobic005G000500--Sobic001G170800 Sobic005G000500--Sobic008G148000 Sobic005G000500--Sobic003G444100 Sobic003G314900 Sobic003G314900 Sobic005G000500--Sobic003G314900 Sobic005G000500--Sobic004G271300 Sobic005G000500--Sobic005G144600 Sobic005G000500--Sobic010G008900 Sobic005G000500--Sobic001G177900 Sobic002G290000 Sobic002G290000 Sobic005G110535--Sobic002G290000 Sobic009G087000 Sobic009G087000 Sobic005G110535--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic005G110535--Sobic010G147700 Sobic008G129200 Sobic008G129200 Sobic005G110535--Sobic008G129200 Sobic003G183700 Sobic003G183700 Sobic005G110535--Sobic003G183700 Sobic003G369200 Sobic003G369200 Sobic005G110535--Sobic003G369200 Sobic004G321400 Sobic004G321400 Sobic005G110535--Sobic004G321400 Sobic005G110535--Sobic003G179500 Sobic001G377700 Sobic001G377700 Sobic005G110535--Sobic001G377700 Sobic010G105400--Sobic005G144600 Sobic010G105400--Sobic004G047100 Sobic010G105400--Sobic009G184200 Sobic010G105400--Sobic005G000500 Sobic010G105400--Sobic001G398400 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic010G105400--Sobic007G168900 Sobic010G105400--Sobic002G204400 Sobic008G148000--Sobic005G000500 Sobic008G148000--Sobic002G204400 Sobic008G148000--Sobic001G170800 Sobic008G148000--Sobic010G008900 Sobic008G148000--Sobic007G168900 Sobic008G148000--Sobic004G271300 Sobic008G148000--Sobic003G444100 Sobic008G148000--Sobic003G314900 Sobic008G148000--Sobic009G184200 Sobic003G444100--Sobic005G000500 Sobic003G444100--Sobic001G170800 Sobic003G444100--Sobic003G260700 Sobic003G444100--Sobic007G168900 Sobic003G444100--Sobic001G177900 Sobic003G444100--Sobic001G398400 Sobic004G257600 Sobic004G257600 Sobic003G444100--Sobic004G257600 Sobic003G444100--Sobic003G314900 Sobic003G444100--Sobic010G105400 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic008G006800 Sobic008G006800 Sobic001G398400--Sobic008G006800 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic005G005700 Sobic005G005700 Sobic001G398400--Sobic005G005700 Sobic001G398400--Sobic010G105400 Sobic004G198100 Sobic004G198100 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600
Octagon: transcription factors


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