Gene annotation
Transcriptome id Sobic.003G043900.3,Sobic.003G043900.1,Sobic.003G043900.2
Synonym Sb03g003856
Functional annotation kinesin-4, putative, expressed
UniProt A0A1B6Q1A3 , A0A1B6Q1E1 , A0A1W0VVP3
Pfam PF00307 PF00225
Panther DB PTHR24115 PTHR24115:SF456
NCBI CDD KOG0239; Kinesin (KAR3 subfamily)
KEGG Orthology K10406; kinesin family member C2/C3
Gene Ontology GO:0005515; protein binding GO:0008017microtubule binding GO:0007018microtubule-based movement GO:0005524ATP binding GO:0003777microtubule motor activity GO:0005871kinesin complex


Orthologs (automatic annotation)
TAIR AT3G10310 : P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
RAP-DB (Rice) LOC_Os11g44880.1 : kinesin-4, putative, expressed
MaizeGDB (Corn) Zm00025a023186
Brachypodium PNT70243 , PNT70242 , PNT70241 , KQK05331 , KQK05332
Barley HORVU3Hr1G033450.8 , HORVU3Hr1G033450.2 , HORVU3Hr1G033450.4 , HORVU3Hr1G033450.5 , HORVU3Hr1G033450.7 , HORVU1Hr1G075920.8 , HORVU1Hr1G075920.9 , HORVU1Hr1G075920.4 , HORVU1Hr1G075920.5 , HORVU1Hr1G075920.6 , HORVU1Hr1G075920.7 , HORVU1Hr1G075920.1 , HORVU1Hr1G075920.2 , HORVU3Hr1G033450.13 , HORVU3Hr1G033450.10 , HORVU3Hr1G033450.11 , HORVU1Hr1G075920.15 , HORVU1Hr1G075920.12 , HORVU1Hr1G075920.13 , HORVU1Hr1G075920.11 , HORVU3Hr1G033450.9 , HORVU3Hr1G033450.1 , HORVU3Hr1G033450.3
Wheat TraesCS3D02G172000 , TraesCS3D02G172000 , TraesCS3D02G172000 , TraesCS3B02G196600 , TraesCS3B02G196600 , TraesCS1A02G341500 , TraesCS1B02G354200 , TraesCS3A02G169800 , TraesCS3A02G169800 , TraesCS3A02G169800 , TraesCS1D02G343800 , TraesCS1D02G343800 , TraesCS1B02G354200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
2 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
3 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
4 Sobic.001G304800 expressed protein -
5 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
6 Sobic.009G146250 - -
7 Sobic.003G008700 MYB family transcription factor, putative, expressed -
8 Sobic.004G156200 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed K02324: DNA polymerase epsilon subunit 1
9 Sobic.009G101100 patellin protein, putative, expressed -
10 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
11 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
12 Sobic.006G124400 ATP binding protein, putative, expressed -
13 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
14 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
15 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
16 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
17 Sobic.006G191900 ZR1 protein, putative, expressed -
18 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
19 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
20 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E


Gene co-expression network
sample Sobic003G043900 Sobic003G043900 Sobic001G109700 Sobic001G109700 Sobic003G043900--Sobic001G109700 Sobic002G296000 Sobic002G296000 Sobic003G043900--Sobic002G296000 Sobic007G125300 Sobic007G125300 Sobic003G043900--Sobic007G125300 Sobic001G304800 Sobic001G304800 Sobic003G043900--Sobic001G304800 Sobic005G110535 Sobic005G110535 Sobic003G043900--Sobic005G110535 Sobic009G146250 Sobic009G146250 Sobic003G043900--Sobic009G146250 Sobic003G008700 Sobic003G008700 Sobic003G043900--Sobic003G008700 Sobic004G156200 Sobic004G156200 Sobic003G043900--Sobic004G156200 Sobic009G101100 Sobic009G101100 Sobic003G043900--Sobic009G101100 Sobic001G109700--Sobic003G043900 Sobic001G109700--Sobic007G125300 Sobic001G109700--Sobic005G110535 Sobic008G148000 Sobic008G148000 Sobic001G109700--Sobic008G148000 Sobic001G109700--Sobic002G296000 Sobic005G000500 Sobic005G000500 Sobic001G109700--Sobic005G000500 Sobic001G109700--Sobic001G304800 Sobic001G109700--Sobic004G156200 Sobic002G290000 Sobic002G290000 Sobic001G109700--Sobic002G290000 Sobic007G027900 Sobic007G027900 Sobic002G296000--Sobic007G027900 Sobic006G124400 Sobic006G124400 Sobic002G296000--Sobic006G124400 Sobic002G296000--Sobic009G101100 Sobic007G168900 Sobic007G168900 Sobic002G296000--Sobic007G168900 Sobic005G005700 Sobic005G005700 Sobic002G296000--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic002G296000--Sobic008G006800 Sobic004G271300 Sobic004G271300 Sobic002G296000--Sobic004G271300 Sobic010G017400 Sobic010G017400 Sobic002G296000--Sobic010G017400 Sobic008G083500 Sobic008G083500 Sobic002G296000--Sobic008G083500 Sobic007G125300--Sobic002G290000 Sobic007G125300--Sobic005G110535 Sobic007G125300--Sobic008G148000 Sobic004G053900 Sobic004G053900 Sobic007G125300--Sobic004G053900 Sobic007G125300--Sobic001G109700 Sobic001G377700 Sobic001G377700 Sobic007G125300--Sobic001G377700 Sobic002G204400 Sobic002G204400 Sobic007G125300--Sobic002G204400 Sobic003G118100 Sobic003G118100 Sobic007G125300--Sobic003G118100 Sobic002G113400 Sobic002G113400 Sobic007G125300--Sobic002G113400 Sobic001G304800--Sobic002G296000 Sobic002G286700 Sobic002G286700 Sobic001G304800--Sobic002G286700 Sobic001G304800--Sobic008G083500 Sobic001G304800--Sobic009G101100 Sobic006G105600 Sobic006G105600 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic001G304800--Sobic009G146250 Sobic001G304800--Sobic006G124400 Sobic005G110535--Sobic002G290000 Sobic009G087000 Sobic009G087000 Sobic005G110535--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic005G110535--Sobic010G147700 Sobic008G129200 Sobic008G129200 Sobic005G110535--Sobic008G129200 Sobic003G183700 Sobic003G183700 Sobic005G110535--Sobic003G183700 Sobic003G369200 Sobic003G369200 Sobic005G110535--Sobic003G369200 Sobic004G321400 Sobic004G321400 Sobic005G110535--Sobic004G321400 Sobic003G179500 Sobic003G179500 Sobic005G110535--Sobic003G179500 Sobic005G110535--Sobic001G377700 Sobic009G146250--Sobic004G156200 Sobic006G195500 Sobic006G195500 Sobic009G146250--Sobic006G195500 Sobic002G021200 Sobic002G021200 Sobic009G146250--Sobic002G021200 Sobic006G275500 Sobic006G275500 Sobic009G146250--Sobic006G275500 Sobic006G120600 Sobic006G120600 Sobic009G146250--Sobic006G120600 Sobic007G187700 Sobic007G187700 Sobic009G146250--Sobic007G187700 Sobic009G146250--Sobic001G304800 Sobic005G068800 Sobic005G068800 Sobic009G146250--Sobic005G068800 Sobic009G146250--Sobic001G377700 Sobic001G170800 Sobic001G170800 Sobic003G008700--Sobic001G170800 Sobic004G047100 Sobic004G047100 Sobic003G008700--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic003G008700--Sobic009G184200 Sobic003G008700--Sobic005G000500 Sobic003G008700--Sobic005G110535 Sobic010G105400 Sobic010G105400 Sobic003G008700--Sobic010G105400 Sobic003G008700--Sobic008G148000 Sobic003G444100 Sobic003G444100 Sobic003G008700--Sobic003G444100 Sobic001G398400 Sobic001G398400 Sobic003G008700--Sobic001G398400 Sobic004G156200--Sobic005G110535 Sobic004G156200--Sobic005G068800 Sobic003G423600 Sobic003G423600 Sobic004G156200--Sobic003G423600 Sobic004G156200--Sobic002G290000 Sobic004G156200--Sobic009G087000 Sobic006G281400 Sobic006G281400 Sobic004G156200--Sobic006G281400 Sobic004G156200--Sobic003G369200 Sobic004G156200--Sobic009G146250 Sobic009G052100 Sobic009G052100 Sobic004G156200--Sobic009G052100 Sobic009G101100--Sobic002G296000 Sobic009G101100--Sobic006G124400 Sobic009G101100--Sobic007G027900 Sobic003G032200 Sobic003G032200 Sobic009G101100--Sobic003G032200 Sobic006G221300 Sobic006G221300 Sobic009G101100--Sobic006G221300 Sobic009G101100--Sobic001G304800 Sobic009G101100--Sobic008G083500 Sobic009G101100--Sobic006G105600 Sobic009G101100--Sobic010G105400
Octagon: transcription factors


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