Gene annotation
Transcriptome id Sobic.001G088000.1
Synonym Sb01g007940
Functional annotation expressed protein
UniProt C5X0B3
Pfam -
Panther DB PTHR35493 PTHR35493:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17240 : -
RAP-DB (Rice) LOC_Os03g53970.1 : expressed protein
MaizeGDB (Corn) Zm00025a016794 , Zm00025a036806 , Zm00025a008173
Brachypodium -
Barley HORVU5Hr1G095310.5 , HORVU5Hr1G095310.4 , HORVU5Hr1G095310.7 , HORVU5Hr1G095310.6 , HORVU5Hr1G095310.1 , HORVU5Hr1G095310.3 , HORVU5Hr1G095310.2 , HORVU5Hr1G095310.9 , HORVU5Hr1G095310.8
Wheat TraesCS5B02G395300 , TraesCS5D02G400200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G164900 expressed protein -
2 Sobic.006G031400 expressed protein -
3 Sobic.002G113600 rhoGAP domain containing protein, expressed -
4 Sobic.002G074500 shugoshin-1, putative, expressed -
5 Sobic.001G296000 expressed protein -
6 Sobic.003G092000 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.010G078400 expressed protein -
8 Sobic.006G137300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
9 Sobic.001G221601 - -
10 Sobic.001G540200 PAIR1, putative, expressed -
11 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
12 Sobic.009G014500 expressed protein -
13 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
14 Sobic.006G234500 OsFBD10 - F-box and FBD domain containing protein, expressed -
15 Sobic.001G230300 shugoshin-1, putative, expressed -
16 Sobic.001G497800 DUF623 domain containing protein, expressed -
17 Sobic.006G215200 caltractin, putative, expressed -
18 Sobic.009G192700 ATBARD1/BARD1, putative, expressed K10683: BRCA1-associated RING domain protein 1
19 Sobic.002G095200 expressed protein -
20 Sobic.002G390700 serine/threonine-protein kinase Haspin, putative, expressed K16315: serine/threonine-protein kinase haspin


Gene co-expression network
sample Sobic001G088000 Sobic001G088000 Sobic005G164900 Sobic005G164900 Sobic001G088000--Sobic005G164900 Sobic006G031400 Sobic006G031400 Sobic001G088000--Sobic006G031400 Sobic002G113600 Sobic002G113600 Sobic001G088000--Sobic002G113600 Sobic002G074500 Sobic002G074500 Sobic001G088000--Sobic002G074500 Sobic001G296000 Sobic001G296000 Sobic001G088000--Sobic001G296000 Sobic003G092000 Sobic003G092000 Sobic001G088000--Sobic003G092000 Sobic010G078400 Sobic010G078400 Sobic001G088000--Sobic010G078400 Sobic006G137300 Sobic006G137300 Sobic001G088000--Sobic006G137300 Sobic001G221601 Sobic001G221601 Sobic001G088000--Sobic001G221601 Sobic005G164900--Sobic002G113600 Sobic004G339500 Sobic004G339500 Sobic005G164900--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic005G164900--Sobic008G114900 Sobic003G008700 Sobic003G008700 Sobic005G164900--Sobic003G008700 Sobic006G215200 Sobic006G215200 Sobic005G164900--Sobic006G215200 Sobic001G230300 Sobic001G230300 Sobic005G164900--Sobic001G230300 Sobic001G091500 Sobic001G091500 Sobic005G164900--Sobic001G091500 Sobic008G006800 Sobic008G006800 Sobic005G164900--Sobic008G006800 Sobic001G540200 Sobic001G540200 Sobic005G164900--Sobic001G540200 Sobic006G031400--Sobic001G296000 Sobic010G101100 Sobic010G101100 Sobic006G031400--Sobic010G101100 Sobic006G031400--Sobic001G088000 Sobic009G120700 Sobic009G120700 Sobic006G031400--Sobic009G120700 Sobic004G047100 Sobic004G047100 Sobic006G031400--Sobic004G047100 Sobic009G157600 Sobic009G157600 Sobic006G031400--Sobic009G157600 Sobic001G078600 Sobic001G078600 Sobic006G031400--Sobic001G078600 Sobic006G031400--Sobic002G113600 Sobic006G031400--Sobic001G230300 Sobic002G113600--Sobic005G164900 Sobic002G113600--Sobic006G215200 Sobic008G093600 Sobic008G093600 Sobic002G113600--Sobic008G093600 Sobic002G113600--Sobic003G008700 Sobic002G224200 Sobic002G224200 Sobic002G113600--Sobic002G224200 Sobic002G113600--Sobic008G114900 Sobic002G113600--Sobic004G339500 Sobic007G168900 Sobic007G168900 Sobic002G113600--Sobic007G168900 Sobic003G043900 Sobic003G043900 Sobic002G113600--Sobic003G043900 Sobic003G384100 Sobic003G384100 Sobic002G074500--Sobic003G384100 Sobic002G239800 Sobic002G239800 Sobic002G074500--Sobic002G239800 Sobic009G014500 Sobic009G014500 Sobic002G074500--Sobic009G014500 Sobic002G390700 Sobic002G390700 Sobic002G074500--Sobic002G390700 Sobic001G497800 Sobic001G497800 Sobic002G074500--Sobic001G497800 Sobic006G087800 Sobic006G087800 Sobic002G074500--Sobic006G087800 Sobic001G538275 Sobic001G538275 Sobic002G074500--Sobic001G538275 Sobic002G095800 Sobic002G095800 Sobic002G074500--Sobic002G095800 Sobic001G001700 Sobic001G001700 Sobic002G074500--Sobic001G001700 Sobic001G296000--Sobic009G120700 Sobic001G296000--Sobic006G031400 Sobic001G296000--Sobic001G091500 Sobic002G426800 Sobic002G426800 Sobic001G296000--Sobic002G426800 Sobic001G296000--Sobic002G113600 Sobic001G296000--Sobic005G164900 Sobic004G132900 Sobic004G132900 Sobic001G296000--Sobic004G132900 Sobic001G296000--Sobic001G088000 Sobic001G296000--Sobic001G230300 Sobic003G092000--Sobic010G078400 Sobic003G092000--Sobic002G390700 Sobic008G017600 Sobic008G017600 Sobic003G092000--Sobic008G017600 Sobic003G398600 Sobic003G398600 Sobic003G092000--Sobic003G398600 Sobic009G128400 Sobic009G128400 Sobic003G092000--Sobic009G128400 Sobic003G092000--Sobic001G088000 Sobic002G187200 Sobic002G187200 Sobic003G092000--Sobic002G187200 Sobic009G180700 Sobic009G180700 Sobic003G092000--Sobic009G180700 Sobic005G141200 Sobic005G141200 Sobic003G092000--Sobic005G141200 Sobic010G078400--Sobic002G390700 Sobic010G078400--Sobic003G092000 Sobic010G078400--Sobic006G137300 Sobic010G078400--Sobic001G001700 Sobic010G078400--Sobic002G239800 Sobic010G078400--Sobic005G164900 Sobic010G078400--Sobic001G088000 Sobic002G038500 Sobic002G038500 Sobic010G078400--Sobic002G038500 Sobic010G078400--Sobic002G074500 Sobic006G137300--Sobic001G001700 Sobic006G137300--Sobic010G078400 Sobic008G093700 Sobic008G093700 Sobic006G137300--Sobic008G093700 Sobic001G088400 Sobic001G088400 Sobic006G137300--Sobic001G088400 Sobic002G181800 Sobic002G181800 Sobic006G137300--Sobic002G181800 Sobic006G137300--Sobic001G088000 Sobic006G137300--Sobic002G038500 Sobic005G163600 Sobic005G163600 Sobic006G137300--Sobic005G163600 Sobic006G137300--Sobic005G164900 Sobic004G312400 Sobic004G312400 Sobic001G221601--Sobic004G312400 Sobic001G221601--Sobic002G390700 Sobic004G064700 Sobic004G064700 Sobic001G221601--Sobic004G064700 Sobic009G166650 Sobic009G166650 Sobic001G221601--Sobic009G166650 Sobic004G073800 Sobic004G073800 Sobic001G221601--Sobic004G073800 Sobic003G107000 Sobic003G107000 Sobic001G221601--Sobic003G107000 Sobic010G213000 Sobic010G213000 Sobic001G221601--Sobic010G213000 Sobic001G221601--Sobic001G088400 Sobic001G221601--Sobic001G088000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.