Gene annotation
Transcriptome id Sobic.006G234500.1
Synonym Sb06g030200
Functional annotation OsFBD10 - F-box and FBD domain containing protein, expressed
UniProt C5Y8X4
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g13170.1 : OsFBD10 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK08570 , PNT64187 , KQK15162 , KQK08569
Barley HORVU5Hr1G012170.1 , HORVU5Hr1G012170.2 , HORVU2Hr1G012400.1 , HORVU4Hr1G021110.1 , HORVU4Hr1G021120.1 , HORVU4Hr1G021050.8 , HORVU4Hr1G021050.4 , HORVU4Hr1G021050.5 , HORVU2Hr1G009570.1 , HORVU4Hr1G021050.7 , HORVU4Hr1G021050.1 , HORVU4Hr1G021050.2 , HORVU4Hr1G021050.3 , HORVU4Hr1G021110.3 , HORVU4Hr1G021110.2 , HORVU4Hr1G021050.6
Wheat TraesCS5D02G063500 , TraesCS6B02G137400 , TraesCS4D02G113200 , TraesCS2B02G088600 , TraesCS5D02G063500 , TraesCS5B02G057900 , TraesCS2D02G019000 , TraesCS4B02G115500 , TraesCS4B02G115300 , TraesCS4A02G199900 , TraesCS5D02G063100 , TraesCS3D02G163600 , TraesCS4D02G113000 , TraesCS5B02G058100 , TraesCS3A02G427000 , TraesCS6D02G097200 , TraesCS2A02G073700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G116200 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.002G095200 expressed protein -
3 Sobic.004G041000 uncharacterized Cys-rich domain containing protein, putative, expressed -
4 Sobic.003G289000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@3-5 exonuclease domain-containing protein, putative, expressed -
5 Sobic.010G058400 expressed protein -
6 Sobic.004G061300 expressed protein -
7 Sobic.004G345300 expressed protein -
8 Sobic.005G082000 DEFL8 - Defensin and Defensin-like DEFL family -
9 Sobic.004G026900 ubiquitin conjugating enzyme protein, putative, expressed -
10 Sobic.004G338400 "TH1(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659894)@DUF640 domain containing protein, putative, expressed -
11 Sobic.003G303000 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
12 Sobic.003G063600 expressed protein -
13 Sobic.003G237700 - -
14 Sobic.004G295200 expressed protein -
15 Sobic.006G167850 - -
16 Sobic.006G262001 - -
17 Sobic.004G149433 - -
18 Sobic.005G181700 NB-ARC domain containing protein, putative, expressed -
19 Sobic.003G229650 - -
20 Sobic.001G062200 AN1-like zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic006G234500 Sobic006G234500 Sobic006G116200 Sobic006G116200 Sobic006G234500--Sobic006G116200 Sobic002G095200 Sobic002G095200 Sobic006G234500--Sobic002G095200 Sobic004G041000 Sobic004G041000 Sobic006G234500--Sobic004G041000 Sobic003G289000 Sobic003G289000 Sobic006G234500--Sobic003G289000 Sobic010G058400 Sobic010G058400 Sobic006G234500--Sobic010G058400 Sobic004G061300 Sobic004G061300 Sobic006G234500--Sobic004G061300 Sobic004G345300 Sobic004G345300 Sobic006G234500--Sobic004G345300 Sobic005G082000 Sobic005G082000 Sobic006G234500--Sobic005G082000 Sobic004G026900 Sobic004G026900 Sobic006G234500--Sobic004G026900 Sobic006G116200--Sobic004G061300 Sobic006G116200--Sobic002G095200 Sobic006G116200--Sobic004G026900 Sobic003G286650 Sobic003G286650 Sobic006G116200--Sobic003G286650 Sobic006G116200--Sobic004G345300 Sobic005G181700 Sobic005G181700 Sobic006G116200--Sobic005G181700 Sobic009G030701 Sobic009G030701 Sobic006G116200--Sobic009G030701 Sobic001G025201 Sobic001G025201 Sobic006G116200--Sobic001G025201 Sobic010G206100 Sobic010G206100 Sobic006G116200--Sobic010G206100 Sobic002G095200--Sobic006G116200 Sobic003G229650 Sobic003G229650 Sobic002G095200--Sobic003G229650 Sobic002G095200--Sobic006G234500 Sobic002G095200--Sobic004G061300 Sobic001G325500 Sobic001G325500 Sobic002G095200--Sobic001G325500 Sobic009G202101 Sobic009G202101 Sobic002G095200--Sobic009G202101 Sobic004G203666 Sobic004G203666 Sobic002G095200--Sobic004G203666 Sobic005G110517 Sobic005G110517 Sobic002G095200--Sobic005G110517 Sobic002G095200--Sobic004G026900 Sobic003G049000 Sobic003G049000 Sobic004G041000--Sobic003G049000 Sobic003G303000 Sobic003G303000 Sobic004G041000--Sobic003G303000 Sobic004G041000--Sobic006G234500 Sobic003G063600 Sobic003G063600 Sobic004G041000--Sobic003G063600 Sobic002G348200 Sobic002G348200 Sobic004G041000--Sobic002G348200 Sobic005G008700 Sobic005G008700 Sobic004G041000--Sobic005G008700 Sobic003G049100 Sobic003G049100 Sobic004G041000--Sobic003G049100 Sobic003G429101 Sobic003G429101 Sobic004G041000--Sobic003G429101 Sobic007G172900 Sobic007G172900 Sobic004G041000--Sobic007G172900 Sobic003G289000--Sobic005G082000 Sobic003G289000--Sobic003G063600 Sobic004G289700 Sobic004G289700 Sobic003G289000--Sobic004G289700 Sobic005G156800 Sobic005G156800 Sobic003G289000--Sobic005G156800 Sobic002G380750 Sobic002G380750 Sobic003G289000--Sobic002G380750 Sobic005G163450 Sobic005G163450 Sobic003G289000--Sobic005G163450 Sobic001G452400 Sobic001G452400 Sobic003G289000--Sobic001G452400 Sobic003G058400 Sobic003G058400 Sobic003G289000--Sobic003G058400 Sobic003G289000--Sobic003G049100 Sobic001G497800 Sobic001G497800 Sobic010G058400--Sobic001G497800 Sobic010G058400--Sobic006G234500 Sobic010G058400--Sobic003G049000 Sobic010G058400--Sobic004G041000 Sobic010G248100 Sobic010G248100 Sobic010G058400--Sobic010G248100 Sobic002G074500 Sobic002G074500 Sobic010G058400--Sobic002G074500 Sobic002G326900 Sobic002G326900 Sobic010G058400--Sobic002G326900 Sobic004G205700 Sobic004G205700 Sobic010G058400--Sobic004G205700 Sobic007G157400 Sobic007G157400 Sobic010G058400--Sobic007G157400 Sobic004G061300--Sobic004G026900 Sobic007G059800 Sobic007G059800 Sobic004G061300--Sobic007G059800 Sobic004G061300--Sobic005G181700 Sobic004G061300--Sobic003G286650 Sobic004G201200 Sobic004G201200 Sobic004G061300--Sobic004G201200 Sobic004G061300--Sobic001G025201 Sobic005G057600 Sobic005G057600 Sobic004G061300--Sobic005G057600 Sobic003G318400 Sobic003G318400 Sobic004G061300--Sobic003G318400 Sobic001G062200 Sobic001G062200 Sobic004G061300--Sobic001G062200 Sobic002G185000 Sobic002G185000 Sobic004G345300--Sobic002G185000 Sobic004G345300--Sobic001G025201 Sobic003G353050 Sobic003G353050 Sobic004G345300--Sobic003G353050 Sobic004G345300--Sobic003G286650 Sobic001G418300 Sobic001G418300 Sobic004G345300--Sobic001G418300 Sobic004G345300--Sobic007G059800 Sobic004G295200 Sobic004G295200 Sobic004G345300--Sobic004G295200 Sobic006G107332 Sobic006G107332 Sobic004G345300--Sobic006G107332 Sobic002G143600 Sobic002G143600 Sobic004G345300--Sobic002G143600 Sobic005G082000--Sobic004G289700 Sobic005G082000--Sobic003G063600 Sobic005G082000--Sobic003G058400 Sobic001G272300 Sobic001G272300 Sobic005G082000--Sobic001G272300 Sobic004G026900--Sobic004G061300 Sobic004G026900--Sobic003G286650 Sobic004G026900--Sobic001G025201 Sobic004G026900--Sobic003G353050 Sobic004G026900--Sobic007G059800 Sobic009G178000 Sobic009G178000 Sobic004G026900--Sobic009G178000 Sobic002G069601 Sobic002G069601 Sobic004G026900--Sobic002G069601 Sobic004G026900--Sobic003G318400 Sobic004G026900--Sobic005G181700
Octagon: transcription factors


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