Gene annotation
Transcriptome id Sobic.010G058400.2,Sobic.010G058400.3,Sobic.010G058400.1
Synonym
Functional annotation expressed protein
UniProt A0A1W0VRP6 , A0A1W0VRQ1 , A0A194YHI5
Pfam PF10539
Panther DB PTHR10857 PTHR10857:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35140 : DCD (Development and Cell Death) domain protein
RAP-DB (Rice) LOC_Os06g07770.1 : expressed protein
MaizeGDB (Corn) Zm00025a042857
Brachypodium -
Barley HORVU7Hr1G028260.3 , HORVU7Hr1G028260.1 , HORVU7Hr1G028260.7 , HORVU7Hr1G028260.6 , HORVU7Hr1G028260.5 , HORVU7Hr1G028260.4
Wheat TraesCS7B02G037200 , TraesCS7D02G136200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G497800 DUF623 domain containing protein, expressed -
2 Sobic.006G234500 OsFBD10 - F-box and FBD domain containing protein, expressed -
3 Sobic.003G049000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.004G041000 uncharacterized Cys-rich domain containing protein, putative, expressed -
5 Sobic.010G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7
6 Sobic.002G074500 shugoshin-1, putative, expressed -
7 Sobic.002G326900 expressed protein K16584: HAUS augmin-like complex subunit 1
8 Sobic.004G205700 remorin C-terminal domain containing protein, putative, expressed -
9 Sobic.007G157400 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.002G390700 serine/threonine-protein kinase Haspin, putative, expressed K16315: serine/threonine-protein kinase haspin
11 Sobic.007G172900 expressed protein -
12 Sobic.002G368000 6-phosphogluconolactonase, putative, expressed K01057: PGLS, pgl, 6-phosphogluconolactonase
13 Sobic.006G151300 MIF4G domain containing protein, putative, expressed -
14 Sobic.002G095800 expressed protein -
15 Sobic.004G330300 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
16 Sobic.009G118500 zinc finger protein, putative, expressed -
17 Sobic.003G384100 ZIP4/SPO22, putative, expressed -
18 Sobic.003G303000 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
19 Sobic.004G056100 expressed protein -
20 Sobic.006G145400 Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed K05350: beta-glucosidase


Gene co-expression network
sample Sobic010G058400 Sobic010G058400 Sobic001G497800 Sobic001G497800 Sobic010G058400--Sobic001G497800 Sobic006G234500 Sobic006G234500 Sobic010G058400--Sobic006G234500 Sobic003G049000 Sobic003G049000 Sobic010G058400--Sobic003G049000 Sobic004G041000 Sobic004G041000 Sobic010G058400--Sobic004G041000 Sobic010G248100 Sobic010G248100 Sobic010G058400--Sobic010G248100 Sobic002G074500 Sobic002G074500 Sobic010G058400--Sobic002G074500 Sobic002G326900 Sobic002G326900 Sobic010G058400--Sobic002G326900 Sobic004G205700 Sobic004G205700 Sobic010G058400--Sobic004G205700 Sobic007G157400 Sobic007G157400 Sobic010G058400--Sobic007G157400 Sobic001G497800--Sobic010G058400 Sobic001G497800--Sobic002G074500 Sobic004G299200 Sobic004G299200 Sobic001G497800--Sobic004G299200 Sobic001G497800--Sobic003G049000 Sobic001G497800--Sobic006G234500 Sobic001G497800--Sobic004G205700 Sobic003G092000 Sobic003G092000 Sobic001G497800--Sobic003G092000 Sobic010G078400 Sobic010G078400 Sobic001G497800--Sobic010G078400 Sobic001G497800--Sobic007G157400 Sobic006G116200 Sobic006G116200 Sobic006G234500--Sobic006G116200 Sobic002G095200 Sobic002G095200 Sobic006G234500--Sobic002G095200 Sobic006G234500--Sobic004G041000 Sobic003G289000 Sobic003G289000 Sobic006G234500--Sobic003G289000 Sobic006G234500--Sobic010G058400 Sobic004G061300 Sobic004G061300 Sobic006G234500--Sobic004G061300 Sobic004G345300 Sobic004G345300 Sobic006G234500--Sobic004G345300 Sobic005G082000 Sobic005G082000 Sobic006G234500--Sobic005G082000 Sobic004G026900 Sobic004G026900 Sobic006G234500--Sobic004G026900 Sobic005G102600 Sobic005G102600 Sobic003G049000--Sobic005G102600 Sobic003G049000--Sobic004G041000 Sobic005G050700 Sobic005G050700 Sobic003G049000--Sobic005G050700 Sobic001G122700 Sobic001G122700 Sobic003G049000--Sobic001G122700 Sobic005G149650 Sobic005G149650 Sobic003G049000--Sobic005G149650 Sobic002G018250 Sobic002G018250 Sobic003G049000--Sobic002G018250 Sobic003G049000--Sobic010G058400 Sobic002G018000 Sobic002G018000 Sobic003G049000--Sobic002G018000 Sobic001G127600 Sobic001G127600 Sobic003G049000--Sobic001G127600 Sobic004G041000--Sobic003G049000 Sobic003G303000 Sobic003G303000 Sobic004G041000--Sobic003G303000 Sobic004G041000--Sobic006G234500 Sobic003G063600 Sobic003G063600 Sobic004G041000--Sobic003G063600 Sobic002G348200 Sobic002G348200 Sobic004G041000--Sobic002G348200 Sobic005G008700 Sobic005G008700 Sobic004G041000--Sobic005G008700 Sobic003G049100 Sobic003G049100 Sobic004G041000--Sobic003G049100 Sobic003G429101 Sobic003G429101 Sobic004G041000--Sobic003G429101 Sobic007G172900 Sobic007G172900 Sobic004G041000--Sobic007G172900 Sobic002G368000 Sobic002G368000 Sobic010G248100--Sobic002G368000 Sobic010G248100--Sobic004G041000 Sobic010G248100--Sobic003G049000 Sobic010G248100--Sobic003G303000 Sobic010G248100--Sobic005G008700 Sobic010G248100--Sobic010G058400 Sobic004G196900 Sobic004G196900 Sobic010G248100--Sobic004G196900 Sobic002G141050 Sobic002G141050 Sobic010G248100--Sobic002G141050 Sobic002G089300 Sobic002G089300 Sobic010G248100--Sobic002G089300 Sobic003G384100 Sobic003G384100 Sobic002G074500--Sobic003G384100 Sobic002G239800 Sobic002G239800 Sobic002G074500--Sobic002G239800 Sobic009G014500 Sobic009G014500 Sobic002G074500--Sobic009G014500 Sobic002G390700 Sobic002G390700 Sobic002G074500--Sobic002G390700 Sobic002G074500--Sobic001G497800 Sobic006G087800 Sobic006G087800 Sobic002G074500--Sobic006G087800 Sobic001G538275 Sobic001G538275 Sobic002G074500--Sobic001G538275 Sobic002G095800 Sobic002G095800 Sobic002G074500--Sobic002G095800 Sobic001G001700 Sobic001G001700 Sobic002G074500--Sobic001G001700 Sobic006G151300 Sobic006G151300 Sobic002G326900--Sobic006G151300 Sobic002G326900--Sobic010G058400 Sobic001G043700 Sobic001G043700 Sobic002G326900--Sobic001G043700 Sobic002G326900--Sobic002G074500 Sobic002G326900--Sobic001G127600 Sobic003G203900 Sobic003G203900 Sobic002G326900--Sobic003G203900 Sobic004G330300 Sobic004G330300 Sobic002G326900--Sobic004G330300 Sobic002G326900--Sobic003G384100 Sobic004G041100 Sobic004G041100 Sobic002G326900--Sobic004G041100 Sobic008G123400 Sobic008G123400 Sobic004G205700--Sobic008G123400 Sobic001G430200 Sobic001G430200 Sobic004G205700--Sobic001G430200 Sobic003G091800 Sobic003G091800 Sobic004G205700--Sobic003G091800 Sobic001G221750 Sobic001G221750 Sobic004G205700--Sobic001G221750 Sobic006G281300 Sobic006G281300 Sobic004G205700--Sobic006G281300 Sobic007G069750 Sobic007G069750 Sobic004G205700--Sobic007G069750 Sobic010G129900 Sobic010G129900 Sobic004G205700--Sobic010G129900 Sobic001G403900 Sobic001G403900 Sobic004G205700--Sobic001G403900 Sobic001G534000 Sobic001G534000 Sobic004G205700--Sobic001G534000 Sobic002G319400 Sobic002G319400 Sobic007G157400--Sobic002G319400 Sobic007G157400--Sobic010G058400 Sobic007G157400--Sobic001G497800 Sobic010G087700 Sobic010G087700 Sobic007G157400--Sobic010G087700 Sobic001G320500 Sobic001G320500 Sobic007G157400--Sobic001G320500 Sobic003G278900 Sobic003G278900 Sobic007G157400--Sobic003G278900 Sobic007G157400--Sobic003G049000 Sobic003G091550 Sobic003G091550 Sobic007G157400--Sobic003G091550 Sobic007G157400--Sobic006G151300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.