Gene annotation
Transcriptome id Sobic.004G330300.1
Synonym Sb04g035920, CPL4
Functional annotation NLI interacting factor-like phosphatase, putative, expressed
UniProt A0A1Z5RQ40
Pfam PF12738 PF03031
Panther DB PTHR23081 PTHR23081:SF8
NCBI CDD -
KEGG Orthology K18999; RNA polymerase II C-terminal domain phosphatase-like 3/4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58003 : C-terminal domain phosphatase-like 4
RAP-DB (Rice) LOC_Os05g32430.1 : NLI interacting factor-like phosphatase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G319400 AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
2 Sobic.002G368000 6-phosphogluconolactonase, putative, expressed K01057: PGLS, pgl, 6-phosphogluconolactonase
3 Sobic.010G058400 expressed protein -
4 Sobic.005G033700 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.003G049000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.001G497800 DUF623 domain containing protein, expressed -
7 Sobic.003G029900 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
8 Sobic.001G171100 expressed protein -
9 Sobic.002G326900 expressed protein K16584: HAUS augmin-like complex subunit 1
10 Sobic.006G151300 MIF4G domain containing protein, putative, expressed -
11 Sobic.010G193700 expressed protein -
12 Sobic.003G057650 - -
13 Sobic.003G108500 glycosyltransferase, putative, expressed -
14 Sobic.010G212700 tetraspanin family protein, putative, expressed -
15 Sobic.002G018000 - -
16 Sobic.001G377600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
18 Sobic.001G445300 - -
19 Sobic.008G037100 expressed protein -
20 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic004G330300 Sobic004G330300 Sobic002G319400 Sobic002G319400 Sobic004G330300--Sobic002G319400 Sobic002G368000 Sobic002G368000 Sobic004G330300--Sobic002G368000 Sobic010G058400 Sobic010G058400 Sobic004G330300--Sobic010G058400 Sobic005G033700 Sobic005G033700 Sobic004G330300--Sobic005G033700 Sobic003G049000 Sobic003G049000 Sobic004G330300--Sobic003G049000 Sobic001G497800 Sobic001G497800 Sobic004G330300--Sobic001G497800 Sobic003G029900 Sobic003G029900 Sobic004G330300--Sobic003G029900 Sobic001G171100 Sobic001G171100 Sobic004G330300--Sobic001G171100 Sobic002G326900 Sobic002G326900 Sobic004G330300--Sobic002G326900 Sobic002G239000 Sobic002G239000 Sobic002G319400--Sobic002G239000 Sobic003G022900 Sobic003G022900 Sobic002G319400--Sobic003G022900 Sobic003G057650 Sobic003G057650 Sobic002G319400--Sobic003G057650 Sobic001G377600 Sobic001G377600 Sobic002G319400--Sobic001G377600 Sobic008G072900 Sobic008G072900 Sobic002G319400--Sobic008G072900 Sobic010G221500 Sobic010G221500 Sobic002G319400--Sobic010G221500 Sobic003G027200 Sobic003G027200 Sobic002G319400--Sobic003G027200 Sobic002G121900 Sobic002G121900 Sobic002G319400--Sobic002G121900 Sobic007G043000 Sobic007G043000 Sobic002G319400--Sobic007G043000 Sobic010G248100 Sobic010G248100 Sobic002G368000--Sobic010G248100 Sobic004G041000 Sobic004G041000 Sobic002G368000--Sobic004G041000 Sobic002G368000--Sobic003G049000 Sobic002G368000--Sobic010G058400 Sobic002G368000--Sobic004G330300 Sobic007G172900 Sobic007G172900 Sobic002G368000--Sobic007G172900 Sobic003G303000 Sobic003G303000 Sobic002G368000--Sobic003G303000 Sobic002G018250 Sobic002G018250 Sobic002G368000--Sobic002G018250 Sobic005G024600 Sobic005G024600 Sobic002G368000--Sobic005G024600 Sobic010G058400--Sobic001G497800 Sobic006G234500 Sobic006G234500 Sobic010G058400--Sobic006G234500 Sobic010G058400--Sobic003G049000 Sobic010G058400--Sobic004G041000 Sobic010G058400--Sobic010G248100 Sobic002G074500 Sobic002G074500 Sobic010G058400--Sobic002G074500 Sobic010G058400--Sobic002G326900 Sobic004G205700 Sobic004G205700 Sobic010G058400--Sobic004G205700 Sobic007G157400 Sobic007G157400 Sobic010G058400--Sobic007G157400 Sobic006G143300 Sobic006G143300 Sobic005G033700--Sobic006G143300 Sobic002G122000 Sobic002G122000 Sobic005G033700--Sobic002G122000 Sobic006G186300 Sobic006G186300 Sobic005G033700--Sobic006G186300 Sobic008G041900 Sobic008G041900 Sobic005G033700--Sobic008G041900 Sobic001G081800 Sobic001G081800 Sobic005G033700--Sobic001G081800 Sobic005G033700--Sobic001G171100 Sobic006G200901 Sobic006G200901 Sobic005G033700--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic005G033700--Sobic002G343000 Sobic005G033700--Sobic003G029900 Sobic005G102600 Sobic005G102600 Sobic003G049000--Sobic005G102600 Sobic003G049000--Sobic004G041000 Sobic005G050700 Sobic005G050700 Sobic003G049000--Sobic005G050700 Sobic001G122700 Sobic001G122700 Sobic003G049000--Sobic001G122700 Sobic005G149650 Sobic005G149650 Sobic003G049000--Sobic005G149650 Sobic003G049000--Sobic002G018250 Sobic003G049000--Sobic010G058400 Sobic002G018000 Sobic002G018000 Sobic003G049000--Sobic002G018000 Sobic001G127600 Sobic001G127600 Sobic003G049000--Sobic001G127600 Sobic001G497800--Sobic010G058400 Sobic001G497800--Sobic002G074500 Sobic004G299200 Sobic004G299200 Sobic001G497800--Sobic004G299200 Sobic001G497800--Sobic003G049000 Sobic001G497800--Sobic006G234500 Sobic001G497800--Sobic004G205700 Sobic003G092000 Sobic003G092000 Sobic001G497800--Sobic003G092000 Sobic010G078400 Sobic010G078400 Sobic001G497800--Sobic010G078400 Sobic001G497800--Sobic007G157400 Sobic003G029900--Sobic001G377600 Sobic003G029900--Sobic008G072900 Sobic003G029900--Sobic003G027200 Sobic004G294600 Sobic004G294600 Sobic003G029900--Sobic004G294600 Sobic003G029900--Sobic001G171100 Sobic010G067200 Sobic010G067200 Sobic003G029900--Sobic010G067200 Sobic007G128400 Sobic007G128400 Sobic003G029900--Sobic007G128400 Sobic003G029900--Sobic003G022900 Sobic006G250200 Sobic006G250200 Sobic003G029900--Sobic006G250200 Sobic010G212700 Sobic010G212700 Sobic001G171100--Sobic010G212700 Sobic001G171100--Sobic003G022900 Sobic001G171100--Sobic001G377600 Sobic001G171100--Sobic008G072900 Sobic001G171100--Sobic003G027200 Sobic005G164800 Sobic005G164800 Sobic001G171100--Sobic005G164800 Sobic001G171100--Sobic003G029900 Sobic001G171200 Sobic001G171200 Sobic001G171100--Sobic001G171200 Sobic006G097300 Sobic006G097300 Sobic001G171100--Sobic006G097300 Sobic006G151300 Sobic006G151300 Sobic002G326900--Sobic006G151300 Sobic002G326900--Sobic010G058400 Sobic001G043700 Sobic001G043700 Sobic002G326900--Sobic001G043700 Sobic002G326900--Sobic002G074500 Sobic002G326900--Sobic001G127600 Sobic003G203900 Sobic003G203900 Sobic002G326900--Sobic003G203900 Sobic002G326900--Sobic004G330300 Sobic003G384100 Sobic003G384100 Sobic002G326900--Sobic003G384100 Sobic004G041100 Sobic004G041100 Sobic002G326900--Sobic004G041100
Octagon: transcription factors


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