Gene annotation
Transcriptome id Sobic.002G319400.1
Synonym Sb02g034780
Functional annotation AAA family ATPase, putative, expressed
UniProt A0A1B6QEK6
Pfam PF14363 PF00004
Panther DB PTHR23070 PTHR23070:SF39
NCBI CDD KOG0743; AAA+-type ATPase
KEGG Orthology K08900; mitochondrial chaperone BCS1
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G50930 : cytochrome BC1 synthesis
RAP-DB (Rice) LOC_Os03g38800.1 : AAA family ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a016039 , Zm00025a045292 , Zm00025a008606
Brachypodium KQK15981 , KQJ85594 , KQK15975 , PNT75004 , PNT75003 , KQJ98547 , KQK20476 , KQK20475
Barley HORVU5Hr1G000640.8 , HORVU5Hr1G000640.1 , HORVU5Hr1G000640.3 , HORVU5Hr1G000640.5 , HORVU5Hr1G000640.4 , HORVU5Hr1G000640.7 , HORVU2Hr1G046240.1 , HORVU2Hr1G046240.3 , HORVU5Hr1G026270.5 , HORVU5Hr1G026270.6 , HORVU5Hr1G026270.1 , HORVU5Hr1G026270.2 , HORVU5Hr1G026270.3 , HORVU2Hr1G046330.4 , HORVU2Hr1G046330.1 , HORVU2Hr1G046330.2 , HORVU2Hr1G046330.3 , HORVU5Hr1G124260.3 , HORVU3Hr1G114150.2 , HORVU2Hr1G046310.3 , HORVU2Hr1G046310.1 , HORVU5Hr1G124290.8 , HORVU5Hr1G124290.7 , HORVU5Hr1G124290.6 , HORVU5Hr1G124290.5 , HORVU5Hr1G124290.4 , HORVU5Hr1G124290.3 , HORVU5Hr1G124290.2 , HORVU5Hr1G124290.1 , HORVU3Hr1G117690.1 , HORVU3Hr1G086670.1 , HORVU3Hr1G086670.2 , HORVU3Hr1G086670.3 , HORVU3Hr1G086670.4 , HORVU3Hr1G086670.5 , HORVU6Hr1G021770.3 , HORVU6Hr1G021770.2 , HORVU6Hr1G021770.1 , HORVU6Hr1G021770.4 , HORVU5Hr1G107410.2 , HORVU5Hr1G107410.3 , HORVU5Hr1G107410.4 , HORVU1Hr1G093600.5 , HORVU1Hr1G093600.4 , HORVU1Hr1G093600.1 , HORVU1Hr1G093600.3 , HORVU1Hr1G093600.2 , HORVU2Hr1G046180.3 , HORVU2Hr1G046180.2 , HORVU2Hr1G046180.1 , HORVU2Hr1G046180.5 , HORVU2Hr1G046180.4
Wheat TraesCS1D02G439400 , TraesCS2B02G247000 , TraesCS3A02G357100 , TraesCS2A02G221700 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS3B02G389700 , TraesCS3D02G350900 , TraesCS1A02G429300 , TraesCS2D02G227400 , TraesCS2A02G221500 , TraesCS1D02G438800 , TraesCS1B02G464100 , TraesCS2D02G227500 , TraesCS3A02G356800 , TraesCS1A02G430100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G239000 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
3 Sobic.003G057650 - -
4 Sobic.001G377600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
5 Sobic.008G072900 OsMADS13 - MADS-box family gene with MIKCc type-box, expressed -
6 Sobic.010G221500 OsMADS30 - MADS-box family gene with MIKCc type-box, expressed -
7 Sobic.003G027200 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
9 Sobic.007G043000 transcription factor X1, putative, expressed -
10 Sobic.004G254100 pleiotropic drug resistance protein, putative, expressed -
11 Sobic.003G029900 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
12 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
13 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
14 Sobic.007G109000 response regulator receiver domain containing protein, expressed K14492: two-component response regulator ARR-A family
15 Sobic.004G017700 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
16 Sobic.004G167900 pectinesterase inhibitor domain containing protein, putative, expressed -
17 Sobic.010G233500 vignain precursor, putative, expressed -
18 Sobic.005G148700 - -
19 Sobic.006G097300 F-box protein FBW2, putative, expressed -
20 Sobic.001G171100 expressed protein -


Gene co-expression network
sample Sobic002G319400 Sobic002G319400 Sobic002G239000 Sobic002G239000 Sobic002G319400--Sobic002G239000 Sobic003G022900 Sobic003G022900 Sobic002G319400--Sobic003G022900 Sobic003G057650 Sobic003G057650 Sobic002G319400--Sobic003G057650 Sobic001G377600 Sobic001G377600 Sobic002G319400--Sobic001G377600 Sobic008G072900 Sobic008G072900 Sobic002G319400--Sobic008G072900 Sobic010G221500 Sobic010G221500 Sobic002G319400--Sobic010G221500 Sobic003G027200 Sobic003G027200 Sobic002G319400--Sobic003G027200 Sobic002G121900 Sobic002G121900 Sobic002G319400--Sobic002G121900 Sobic007G043000 Sobic007G043000 Sobic002G319400--Sobic007G043000 Sobic003G381100 Sobic003G381100 Sobic002G239000--Sobic003G381100 Sobic004G254100 Sobic004G254100 Sobic002G239000--Sobic004G254100 Sobic002G239000--Sobic007G043000 Sobic003G063700 Sobic003G063700 Sobic002G239000--Sobic003G063700 Sobic002G239000--Sobic008G072900 Sobic002G239000--Sobic003G027200 Sobic001G216400 Sobic001G216400 Sobic002G239000--Sobic001G216400 Sobic009G211300 Sobic009G211300 Sobic002G239000--Sobic009G211300 Sobic004G056000 Sobic004G056000 Sobic002G239000--Sobic004G056000 Sobic001G171100 Sobic001G171100 Sobic003G022900--Sobic001G171100 Sobic006G097300 Sobic006G097300 Sobic003G022900--Sobic006G097300 Sobic001G171200 Sobic001G171200 Sobic003G022900--Sobic001G171200 Sobic007G193300 Sobic007G193300 Sobic003G022900--Sobic007G193300 Sobic003G022900--Sobic008G072900 Sobic010G212700 Sobic010G212700 Sobic003G022900--Sobic010G212700 Sobic006G066400 Sobic006G066400 Sobic003G022900--Sobic006G066400 Sobic001G137400 Sobic001G137400 Sobic003G022900--Sobic001G137400 Sobic004G218000 Sobic004G218000 Sobic003G022900--Sobic004G218000 Sobic002G212400 Sobic002G212400 Sobic003G057650--Sobic002G212400 Sobic009G039700 Sobic009G039700 Sobic003G057650--Sobic009G039700 Sobic001G301100 Sobic001G301100 Sobic003G057650--Sobic001G301100 Sobic005G174600 Sobic005G174600 Sobic003G057650--Sobic005G174600 Sobic005G148700 Sobic005G148700 Sobic003G057650--Sobic005G148700 Sobic005G221200 Sobic005G221200 Sobic003G057650--Sobic005G221200 Sobic009G039500 Sobic009G039500 Sobic003G057650--Sobic009G039500 Sobic005G109900 Sobic005G109900 Sobic003G057650--Sobic005G109900 Sobic005G109800 Sobic005G109800 Sobic003G057650--Sobic005G109800 Sobic003G029900 Sobic003G029900 Sobic001G377600--Sobic003G029900 Sobic001G377600--Sobic008G072900 Sobic001G377600--Sobic003G027200 Sobic004G294600 Sobic004G294600 Sobic001G377600--Sobic004G294600 Sobic001G377600--Sobic001G171100 Sobic006G250200 Sobic006G250200 Sobic001G377600--Sobic006G250200 Sobic005G164800 Sobic005G164800 Sobic001G377600--Sobic005G164800 Sobic010G067200 Sobic010G067200 Sobic001G377600--Sobic010G067200 Sobic001G377600--Sobic003G381100 Sobic008G072900--Sobic003G027200 Sobic008G072900--Sobic003G381100 Sobic008G072900--Sobic001G377600 Sobic008G072900--Sobic003G029900 Sobic008G072900--Sobic006G097300 Sobic008G072900--Sobic007G193300 Sobic008G072900--Sobic002G239000 Sobic008G072900--Sobic001G171100 Sobic008G072900--Sobic003G022900 Sobic005G147700 Sobic005G147700 Sobic010G221500--Sobic005G147700 Sobic010G221500--Sobic005G148700 Sobic007G109000 Sobic007G109000 Sobic010G221500--Sobic007G109000 Sobic005G082400 Sobic005G082400 Sobic010G221500--Sobic005G082400 Sobic009G039000 Sobic009G039000 Sobic010G221500--Sobic009G039000 Sobic006G276401 Sobic006G276401 Sobic010G221500--Sobic006G276401 Sobic004G017700 Sobic004G017700 Sobic010G221500--Sobic004G017700 Sobic010G233500 Sobic010G233500 Sobic010G221500--Sobic010G233500 Sobic010G221500--Sobic005G221200 Sobic003G027200--Sobic008G072900 Sobic003G027200--Sobic003G381100 Sobic003G027200--Sobic001G377600 Sobic003G027200--Sobic003G029900 Sobic010G118900 Sobic010G118900 Sobic003G027200--Sobic010G118900 Sobic003G027200--Sobic006G097300 Sobic001G287900 Sobic001G287900 Sobic003G027200--Sobic001G287900 Sobic003G027200--Sobic007G193300 Sobic003G027200--Sobic002G239000 Sobic002G121900--Sobic007G043000 Sobic002G121900--Sobic001G287900 Sobic001G137800 Sobic001G137800 Sobic002G121900--Sobic001G137800 Sobic007G128200 Sobic007G128200 Sobic002G121900--Sobic007G128200 Sobic001G235100 Sobic001G235100 Sobic002G121900--Sobic001G235100 Sobic002G121900--Sobic007G193300 Sobic008G138200 Sobic008G138200 Sobic002G121900--Sobic008G138200 Sobic003G374100 Sobic003G374100 Sobic002G121900--Sobic003G374100 Sobic002G121900--Sobic001G171200 Sobic007G043000--Sobic001G235100 Sobic007G043000--Sobic002G121900 Sobic007G043000--Sobic004G254100 Sobic007G043000--Sobic008G138200 Sobic007G043000--Sobic001G137800 Sobic007G043000--Sobic001G216400 Sobic007G043000--Sobic003G381100 Sobic007G043000--Sobic007G128200 Sobic007G043000--Sobic003G063700
Octagon: transcription factors


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