Gene annotation
Transcriptome id Sobic.003G303000.1
Synonym Sb03g035190
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt C5XKT5
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF47
NCBI CDD -
KEGG Orthology K14611; SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G34190 : Xanthine/uracil permease family protein
RAP-DB (Rice) LOC_Os01g55500.1 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a039981
Brachypodium PNT67992 , KQK09836 , KQJ98047
Barley HORVU3Hr1G073180.14 , HORVU3Hr1G073180.15 , HORVU3Hr1G073180.11 , HORVU3Hr1G073180.12 , HORVU3Hr1G073180.13 , HORVU3Hr1G073180.7 , HORVU3Hr1G073180.2 , HORVU3Hr1G073180.3 , HORVU3Hr1G073180.9
Wheat TraesCS3A02G305700 , TraesCS3D02G296200 , TraesCS3D02G296200 , TraesCS3B02G330800
Populus -


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cDNA sequences
Sobic.003G303000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G429101 - -
2 Sobic.005G163450 - -
3 Sobic.006G261000 cytochrome P450, putative, expressed -
4 Sobic.001G388100 Up-reguralion under drought(PubMedID : 24916767)@Late embryogenesis abundant protein 1("PubMedID : 26759170,PubMedID : 24597475")@late embryogenesis abundant protein 1, putative, expressed -
5 Sobic.003G241400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@seed maturation protein PM41, putative, expressed -
6 Sobic.005G156800 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
7 Sobic.002G380750 - -
8 Sobic.004G041000 uncharacterized Cys-rich domain containing protein, putative, expressed -
9 Sobic.009G214700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@bHelix-loop-helix transcription factor, putative, expressed -
10 Sobic.001G495850 - -
11 Sobic.007G075200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
12 Sobic.002G348200 expressed protein -
13 Sobic.003G399166 - -
14 Sobic.003G046900 expressed protein -
15 Sobic.003G063600 expressed protein -
16 Sobic.009G150800 indole-3-acetate beta-glucosyltransferase, putative, expressed -
17 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
18 Sobic.001G452400 OsFBX81 - F-box domain containing protein, expressed -
19 Sobic.001G220066 - -
20 Sobic.003G389500 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial


Gene co-expression network
sample Sobic003G303000 Sobic003G303000 Sobic003G429101 Sobic003G429101 Sobic003G303000--Sobic003G429101 Sobic005G163450 Sobic005G163450 Sobic003G303000--Sobic005G163450 Sobic006G261000 Sobic006G261000 Sobic003G303000--Sobic006G261000 Sobic001G388100 Sobic001G388100 Sobic003G303000--Sobic001G388100 Sobic003G241400 Sobic003G241400 Sobic003G303000--Sobic003G241400 Sobic005G156800 Sobic005G156800 Sobic003G303000--Sobic005G156800 Sobic002G380750 Sobic002G380750 Sobic003G303000--Sobic002G380750 Sobic004G041000 Sobic004G041000 Sobic003G303000--Sobic004G041000 Sobic009G214700 Sobic009G214700 Sobic003G303000--Sobic009G214700 Sobic003G046900 Sobic003G046900 Sobic003G429101--Sobic003G046900 Sobic010G212900 Sobic010G212900 Sobic003G429101--Sobic010G212900 Sobic001G220066 Sobic001G220066 Sobic003G429101--Sobic001G220066 Sobic002G348200 Sobic002G348200 Sobic003G429101--Sobic002G348200 Sobic002G157350 Sobic002G157350 Sobic003G429101--Sobic002G157350 Sobic004G196000 Sobic004G196000 Sobic003G429101--Sobic004G196000 Sobic003G429101--Sobic009G214700 Sobic006G149650 Sobic006G149650 Sobic003G429101--Sobic006G149650 Sobic008G192200 Sobic008G192200 Sobic003G429101--Sobic008G192200 Sobic003G399166 Sobic003G399166 Sobic005G163450--Sobic003G399166 Sobic005G163450--Sobic005G156800 Sobic005G163450--Sobic002G380750 Sobic001G307450 Sobic001G307450 Sobic005G163450--Sobic001G307450 Sobic007G120100 Sobic007G120100 Sobic005G163450--Sobic007G120100 Sobic001G452400 Sobic001G452400 Sobic005G163450--Sobic001G452400 Sobic005G163450--Sobic003G303000 Sobic003G063600 Sobic003G063600 Sobic005G163450--Sobic003G063600 Sobic003G291050 Sobic003G291050 Sobic005G163450--Sobic003G291050 Sobic007G075200 Sobic007G075200 Sobic006G261000--Sobic007G075200 Sobic006G261000--Sobic009G214700 Sobic006G018500 Sobic006G018500 Sobic006G261000--Sobic006G018500 Sobic006G261000--Sobic003G241400 Sobic003G389500 Sobic003G389500 Sobic006G261000--Sobic003G389500 Sobic006G261000--Sobic004G196000 Sobic001G267950 Sobic001G267950 Sobic006G261000--Sobic001G267950 Sobic005G199500 Sobic005G199500 Sobic006G261000--Sobic005G199500 Sobic002G213050 Sobic002G213050 Sobic006G261000--Sobic002G213050 Sobic001G495850 Sobic001G495850 Sobic001G388100--Sobic001G495850 Sobic009G150800 Sobic009G150800 Sobic001G388100--Sobic009G150800 Sobic001G388100--Sobic003G241400 Sobic006G084100 Sobic006G084100 Sobic001G388100--Sobic006G084100 Sobic001G388100--Sobic006G261000 Sobic001G388100--Sobic009G214700 Sobic001G388100--Sobic007G075200 Sobic006G196700 Sobic006G196700 Sobic001G388100--Sobic006G196700 Sobic001G388100--Sobic003G046900 Sobic003G241400--Sobic006G261000 Sobic003G241400--Sobic009G150800 Sobic003G241400--Sobic001G388100 Sobic003G241400--Sobic001G495850 Sobic003G241400--Sobic009G214700 Sobic003G241400--Sobic007G075200 Sobic003G241400--Sobic003G389500 Sobic003G241400--Sobic006G196700 Sobic003G241400--Sobic004G196000 Sobic005G156800--Sobic002G380750 Sobic005G156800--Sobic001G452400 Sobic010G021600 Sobic010G021600 Sobic005G156800--Sobic010G021600 Sobic001G493300 Sobic001G493300 Sobic005G156800--Sobic001G493300 Sobic001G272300 Sobic001G272300 Sobic005G156800--Sobic001G272300 Sobic002G380750--Sobic005G156800 Sobic002G380750--Sobic001G452400 Sobic002G380750--Sobic010G021600 Sobic002G380750--Sobic001G493300 Sobic002G380750--Sobic001G272300 Sobic003G049000 Sobic003G049000 Sobic004G041000--Sobic003G049000 Sobic004G041000--Sobic003G303000 Sobic006G234500 Sobic006G234500 Sobic004G041000--Sobic006G234500 Sobic004G041000--Sobic003G063600 Sobic004G041000--Sobic002G348200 Sobic005G008700 Sobic005G008700 Sobic004G041000--Sobic005G008700 Sobic003G049100 Sobic003G049100 Sobic004G041000--Sobic003G049100 Sobic004G041000--Sobic003G429101 Sobic007G172900 Sobic007G172900 Sobic004G041000--Sobic007G172900 Sobic009G214700--Sobic006G261000 Sobic009G214700--Sobic007G075200 Sobic009G214700--Sobic001G267950 Sobic009G214700--Sobic003G046900 Sobic009G214700--Sobic006G018500 Sobic009G214700--Sobic005G199500 Sobic009G214700--Sobic003G049100 Sobic009G214700--Sobic004G196000 Sobic009G214700--Sobic008G192200
Octagon: transcription factors


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