Gene annotation
Transcriptome id Sobic.003G345700.1
Synonym SCPL27, Sb03g038940
Functional annotation OsSCP5 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5XP10
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF73
NCBI CDD -
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G07990 : serine carboxypeptidase-like 27
RAP-DB (Rice) LOC_Os01g61690.1 : OsSCP5 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029806 , Zm00025a015672 , Zm00025a026989
Brachypodium KQK10439 , KQK10438 , KQK10440
Barley HORVU3Hr1G087470.24 , HORVU3Hr1G087470.25 , HORVU3Hr1G087470.20 , HORVU3Hr1G087470.21 , HORVU3Hr1G087470.22 , HORVU3Hr1G087470.23 , HORVU3Hr1G087470.8 , HORVU3Hr1G087470.11 , HORVU3Hr1G087470.10 , HORVU3Hr1G087470.13 , HORVU3Hr1G087470.12 , HORVU3Hr1G087470.15 , HORVU3Hr1G087470.17 , HORVU3Hr1G087470.16 , HORVU3Hr1G087470.19 , HORVU3Hr1G087470.18 , HORVU3Hr1G087470.5 , HORVU3Hr1G087470.4 , HORVU3Hr1G087470.7 , HORVU3Hr1G087470.6 , HORVU3Hr1G087470.1 , HORVU3Hr1G087470.3 , HORVU3Hr1G087470.2
Wheat TraesCS3B02G384800 , TraesCS6B02G388600 , TraesCS3A02G352200 , TraesCS3B02G155800 , TraesCS3D02G346200
Populus -


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cDNA sequences
Sobic.003G345700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
2 Sobic.010G138300 DUF617 domain containing protein, expressed -
3 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
5 Sobic.003G236600 expressed protein -
6 Sobic.003G294100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydropyrimidinase, putative, expressed K01465: URA4, dihydroorotase
7 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
8 Sobic.006G102900 expressed protein -
9 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
10 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
11 Sobic.008G102800 expressed protein -
12 Sobic.003G115200 expressed protein -
13 Sobic.005G142300 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
14 Sobic.008G157000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.001G531300 glycosyl hydrolases family 16 protein, protein, expressed -
16 Sobic.001G245800 expressed protein -
17 Sobic.001G111000 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
18 Sobic.009G035300 expressed protein -
19 Sobic.001G434300 expressed protein -
20 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase


Gene co-expression network
sample Sobic003G345700 Sobic003G345700 Sobic003G247600 Sobic003G247600 Sobic003G345700--Sobic003G247600 Sobic010G138300 Sobic010G138300 Sobic003G345700--Sobic010G138300 Sobic001G156500 Sobic001G156500 Sobic003G345700--Sobic001G156500 Sobic003G122200 Sobic003G122200 Sobic003G345700--Sobic003G122200 Sobic003G236600 Sobic003G236600 Sobic003G345700--Sobic003G236600 Sobic003G294100 Sobic003G294100 Sobic003G345700--Sobic003G294100 Sobic001G038300 Sobic001G038300 Sobic003G345700--Sobic001G038300 Sobic006G102900 Sobic006G102900 Sobic003G345700--Sobic006G102900 Sobic003G034600 Sobic003G034600 Sobic003G345700--Sobic003G034600 Sobic005G047100 Sobic005G047100 Sobic003G247600--Sobic005G047100 Sobic003G420100 Sobic003G420100 Sobic003G247600--Sobic003G420100 Sobic004G066900 Sobic004G066900 Sobic003G247600--Sobic004G066900 Sobic007G208100 Sobic007G208100 Sobic003G247600--Sobic007G208100 Sobic008G141200 Sobic008G141200 Sobic003G247600--Sobic008G141200 Sobic003G135400 Sobic003G135400 Sobic003G247600--Sobic003G135400 Sobic003G052900 Sobic003G052900 Sobic003G247600--Sobic003G052900 Sobic003G247600--Sobic003G345700 Sobic006G119000 Sobic006G119000 Sobic003G247600--Sobic006G119000 Sobic001G514200 Sobic001G514200 Sobic010G138300--Sobic001G514200 Sobic009G199001 Sobic009G199001 Sobic010G138300--Sobic009G199001 Sobic008G102800 Sobic008G102800 Sobic010G138300--Sobic008G102800 Sobic009G221500 Sobic009G221500 Sobic010G138300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G138300--Sobic001G245800 Sobic009G074500 Sobic009G074500 Sobic010G138300--Sobic009G074500 Sobic003G340100 Sobic003G340100 Sobic010G138300--Sobic003G340100 Sobic007G050200 Sobic007G050200 Sobic010G138300--Sobic007G050200 Sobic006G227500 Sobic006G227500 Sobic010G138300--Sobic006G227500 Sobic003G250700 Sobic003G250700 Sobic001G156500--Sobic003G250700 Sobic010G047600 Sobic010G047600 Sobic001G156500--Sobic010G047600 Sobic003G115200 Sobic003G115200 Sobic001G156500--Sobic003G115200 Sobic003G000200 Sobic003G000200 Sobic001G156500--Sobic003G000200 Sobic001G261460 Sobic001G261460 Sobic001G156500--Sobic001G261460 Sobic008G055100 Sobic008G055100 Sobic001G156500--Sobic008G055100 Sobic010G014400 Sobic010G014400 Sobic001G156500--Sobic010G014400 Sobic003G121000 Sobic003G121000 Sobic001G156500--Sobic003G121000 Sobic009G232100 Sobic009G232100 Sobic001G156500--Sobic009G232100 Sobic001G475500 Sobic001G475500 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic007G150800 Sobic007G150800 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic003G236600--Sobic008G102800 Sobic006G028500 Sobic006G028500 Sobic003G236600--Sobic006G028500 Sobic003G140700 Sobic003G140700 Sobic003G236600--Sobic003G140700 Sobic003G236600--Sobic009G199001 Sobic004G322100 Sobic004G322100 Sobic003G236600--Sobic004G322100 Sobic001G238000 Sobic001G238000 Sobic003G236600--Sobic001G238000 Sobic002G094600 Sobic002G094600 Sobic003G236600--Sobic002G094600 Sobic004G110700 Sobic004G110700 Sobic003G236600--Sobic004G110700 Sobic004G306900 Sobic004G306900 Sobic003G236600--Sobic004G306900 Sobic009G059500 Sobic009G059500 Sobic003G294100--Sobic009G059500 Sobic008G168100 Sobic008G168100 Sobic003G294100--Sobic008G168100 Sobic002G280700 Sobic002G280700 Sobic003G294100--Sobic002G280700 Sobic001G157800 Sobic001G157800 Sobic003G294100--Sobic001G157800 Sobic009G250100 Sobic009G250100 Sobic003G294100--Sobic009G250100 Sobic002G186900 Sobic002G186900 Sobic003G294100--Sobic002G186900 Sobic002G271300 Sobic002G271300 Sobic003G294100--Sobic002G271300 Sobic008G126600 Sobic008G126600 Sobic003G294100--Sobic008G126600 Sobic007G152900 Sobic007G152900 Sobic003G294100--Sobic007G152900 Sobic002G396400 Sobic002G396400 Sobic001G038300--Sobic002G396400 Sobic001G107100 Sobic001G107100 Sobic001G038300--Sobic001G107100 Sobic001G038300--Sobic003G250700 Sobic001G038300--Sobic001G418100 Sobic001G038300--Sobic010G047600 Sobic001G434300 Sobic001G434300 Sobic001G038300--Sobic001G434300 Sobic001G038300--Sobic001G475500 Sobic001G038300--Sobic007G150800 Sobic001G038300--Sobic003G122200 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic003G107200 Sobic003G107200 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic006G102900--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic009G189200 Sobic009G189200 Sobic006G102900--Sobic009G189200 Sobic004G217450 Sobic004G217450 Sobic003G034600--Sobic004G217450 Sobic003G034600--Sobic003G122200 Sobic003G034600--Sobic001G475500 Sobic003G307400 Sobic003G307400 Sobic003G034600--Sobic003G307400 Sobic006G191800 Sobic006G191800 Sobic003G034600--Sobic006G191800 Sobic006G200000 Sobic006G200000 Sobic003G034600--Sobic006G200000 Sobic003G160700 Sobic003G160700 Sobic003G034600--Sobic003G160700 Sobic009G173500 Sobic009G173500 Sobic003G034600--Sobic009G173500 Sobic003G034600--Sobic007G150800
Octagon: transcription factors


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