Gene annotation
Transcriptome id Sobic.001G111000.1
Synonym GAD, GAD1, Sb01g009880
Functional annotation glutamate decarboxylase, putative, expressed
UniProt C5WMY2
Pfam PF00282
Panther DB PTHR11999 PTHR11999:SF86
NCBI CDD -
KEGG Orthology K01580; E4.1.1.15, gadB, gadA, glutamate decarboxylase
Gene Ontology GO:0016831; carboxy-lyase activity


Orthologs (automatic annotation)
TAIR AT5G17330 : glutamate decarboxylase
RAP-DB (Rice) LOC_Os03g51080.1 : glutamate decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a005384 , Zm00025a052950 , Zm00025a007922 , Zm00025a011205 , Zm00025a011196
Brachypodium KQK13491 , KQJ98585 , PNT77787 , KQJ82857 , KQK22684 , KQJ82853
Barley HORVU3Hr1G003050.7 , HORVU3Hr1G003050.6 , HORVU3Hr1G003050.5 , HORVU3Hr1G003050.4 , HORVU3Hr1G003050.3 , HORVU3Hr1G003050.2 , HORVU3Hr1G003050.1 , HORVU2Hr1G078580.8 , HORVU2Hr1G078580.9 , HORVU2Hr1G078580.2 , HORVU2Hr1G078580.3 , HORVU2Hr1G078580.1 , HORVU2Hr1G078580.6 , HORVU2Hr1G078580.7 , HORVU2Hr1G078580.4 , HORVU2Hr1G078580.5 , HORVU2Hr1G078560.1 , HORVU2Hr1G078560.2 , HORVU2Hr1G078560.3 , HORVU2Hr1G078560.4 , HORVU2Hr1G078560.5 , HORVU2Hr1G078560.6 , HORVU2Hr1G078580.11 , HORVU2Hr1G078580.17 , HORVU2Hr1G078560.7 , HORVU4Hr1G008700.8 , HORVU4Hr1G064790.9 , HORVU4Hr1G064790.14 , HORVU4Hr1G064790.12 , HORVU4Hr1G064790.13 , HORVU4Hr1G064790.10 , HORVU4Hr1G064790.11 , HORVU4Hr1G008700.9 , HORVU4Hr1G064790.5 , HORVU4Hr1G064790.4 , HORVU4Hr1G064790.6 , HORVU4Hr1G064790.1 , HORVU4Hr1G064790.2 , HORVU4Hr1G064790.3 , HORVU4Hr1G008700.1 , HORVU4Hr1G008700.3 , HORVU4Hr1G008700.2 , HORVU4Hr1G008700.5 , HORVU4Hr1G008700.7 , HORVU4Hr1G008700.6 , HORVU7Hr1G081730.1 , HORVU2Hr1G078580.18 , HORVU2Hr1G078580.10 , HORVU4Hr1G064790.8 , HORVU2Hr1G078580.12 , HORVU2Hr1G078580.13 , HORVU2Hr1G078580.14 , HORVU2Hr1G078580.15 , HORVU2Hr1G078580.16 , HORVU4Hr1G008700.4 , HORVU4Hr1G064790.7 , HORVU3Hr1G112860.2 , HORVU3Hr1G112860.1
Wheat TraesCS4A02G075600 , TraesCS3B02G022900 , TraesCS3B02G022900 , TraesCS4B02G231400 , TraesCS3B02G583600 , TraesCS2D02G313500 , TraesCS2B02G334000 , TraesCS2A02G315800 , TraesCS4A02G262600 , TraesCS4A02G262600 , TraesCS2D02G313800 , TraesCS4B02G052300 , TraesCS2B02G333700 , TraesCS2B02G333700 , TraesCS3D02G523200 , TraesCS3D02G023900 , TraesCS3D02G023900 , TraesCS4D02G052500 , TraesCS4D02G052500 , TraesCS3A02G022600 , TraesCS3A02G022600 , TraesCS3A02G022600 , TraesCS2A02G315300 , TraesCS3A02G515300 , TraesCS3A02G515300 , TraesCS4D02G232700 , TraesCS4D02G232700 , TraesCS4A02G369200
Populus PNS23468


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cDNA sequences
Sobic.001G111000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
2 Sobic.003G016100 expressed protein -
3 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
4 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
5 Sobic.003G219800 transferase family protein, putative, expressed -
6 Sobic.005G142300 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
7 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
9 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
10 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
11 Sobic.003G347900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
12 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
13 Sobic.002G327300 expressed protein -
14 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
15 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
16 Sobic.005G110800 - -
17 Sobic.001G128500 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.002G255300 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
19 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
20 Sobic.003G043700 expressed protein -


Gene co-expression network
sample Sobic001G111000 Sobic001G111000 Sobic006G057200 Sobic006G057200 Sobic001G111000--Sobic006G057200 Sobic003G016100 Sobic003G016100 Sobic001G111000--Sobic003G016100 Sobic004G042000 Sobic004G042000 Sobic001G111000--Sobic004G042000 Sobic001G361600 Sobic001G361600 Sobic001G111000--Sobic001G361600 Sobic003G219800 Sobic003G219800 Sobic001G111000--Sobic003G219800 Sobic005G142300 Sobic005G142300 Sobic001G111000--Sobic005G142300 Sobic003G264600 Sobic003G264600 Sobic001G111000--Sobic003G264600 Sobic003G160700 Sobic003G160700 Sobic001G111000--Sobic003G160700 Sobic003G078200 Sobic003G078200 Sobic001G111000--Sobic003G078200 Sobic002G179300 Sobic002G179300 Sobic006G057200--Sobic002G179300 Sobic007G178600 Sobic007G178600 Sobic006G057200--Sobic007G178600 Sobic010G069400 Sobic010G069400 Sobic006G057200--Sobic010G069400 Sobic004G008400 Sobic004G008400 Sobic006G057200--Sobic004G008400 Sobic004G244800 Sobic004G244800 Sobic006G057200--Sobic004G244800 Sobic010G070500 Sobic010G070500 Sobic006G057200--Sobic010G070500 Sobic001G508900 Sobic001G508900 Sobic006G057200--Sobic001G508900 Sobic002G286900 Sobic002G286900 Sobic006G057200--Sobic002G286900 Sobic006G057200--Sobic003G078200 Sobic002G213600 Sobic002G213600 Sobic003G016100--Sobic002G213600 Sobic004G046200 Sobic004G046200 Sobic003G016100--Sobic004G046200 Sobic010G067400 Sobic010G067400 Sobic003G016100--Sobic010G067400 Sobic009G187200 Sobic009G187200 Sobic003G016100--Sobic009G187200 Sobic003G016100--Sobic004G042000 Sobic003G079400 Sobic003G079400 Sobic003G016100--Sobic003G079400 Sobic003G084400 Sobic003G084400 Sobic003G016100--Sobic003G084400 Sobic003G316000 Sobic003G316000 Sobic003G016100--Sobic003G316000 Sobic004G318700 Sobic004G318700 Sobic003G016100--Sobic004G318700 Sobic006G197100 Sobic006G197100 Sobic004G042000--Sobic006G197100 Sobic002G003800 Sobic002G003800 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic001G302600 Sobic001G302600 Sobic004G042000--Sobic001G302600 Sobic003G311800 Sobic003G311800 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic001G295200 Sobic001G295200 Sobic001G361600--Sobic001G295200 Sobic005G113300 Sobic005G113300 Sobic001G361600--Sobic005G113300 Sobic006G116700 Sobic006G116700 Sobic001G361600--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic001G361600--Sobic001G018900 Sobic004G220000 Sobic004G220000 Sobic001G361600--Sobic004G220000 Sobic001G361600--Sobic003G078200 Sobic006G141700 Sobic006G141700 Sobic001G361600--Sobic006G141700 Sobic009G188000 Sobic009G188000 Sobic001G361600--Sobic009G188000 Sobic003G408100 Sobic003G408100 Sobic001G361600--Sobic003G408100 Sobic001G418100 Sobic001G418100 Sobic003G219800--Sobic001G418100 Sobic009G181800 Sobic009G181800 Sobic003G219800--Sobic009G181800 Sobic001G444800 Sobic001G444800 Sobic003G219800--Sobic001G444800 Sobic006G156000 Sobic006G156000 Sobic003G219800--Sobic006G156000 Sobic003G443300 Sobic003G443300 Sobic003G219800--Sobic003G443300 Sobic001G040100 Sobic001G040100 Sobic003G219800--Sobic001G040100 Sobic005G112800 Sobic005G112800 Sobic003G219800--Sobic005G112800 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic005G142300--Sobic004G042000 Sobic005G142300--Sobic001G111000 Sobic003G119500 Sobic003G119500 Sobic005G142300--Sobic003G119500 Sobic004G212300 Sobic004G212300 Sobic005G142300--Sobic004G212300 Sobic010G052200 Sobic010G052200 Sobic005G142300--Sobic010G052200 Sobic005G142300--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic005G142300--Sobic009G109000 Sobic009G232100 Sobic009G232100 Sobic005G142300--Sobic009G232100 Sobic010G028200 Sobic010G028200 Sobic005G142300--Sobic010G028200 Sobic003G264600--Sobic003G408100 Sobic010G063801 Sobic010G063801 Sobic003G264600--Sobic010G063801 Sobic001G318500 Sobic001G318500 Sobic003G264600--Sobic001G318500 Sobic001G054900 Sobic001G054900 Sobic003G264600--Sobic001G054900 Sobic002G327300 Sobic002G327300 Sobic003G264600--Sobic002G327300 Sobic004G340900 Sobic004G340900 Sobic003G264600--Sobic004G340900 Sobic003G228200 Sobic003G228200 Sobic003G264600--Sobic003G228200 Sobic003G264600--Sobic006G116700 Sobic003G264600--Sobic006G141700 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G125650 Sobic003G125650 Sobic003G160700--Sobic003G125650 Sobic003G160700--Sobic003G078200 Sobic001G475500 Sobic001G475500 Sobic003G160700--Sobic001G475500 Sobic001G502900 Sobic001G502900 Sobic003G160700--Sobic001G502900 Sobic003G160700--Sobic004G220000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700 Sobic002G372400 Sobic002G372400 Sobic003G078200--Sobic002G372400 Sobic009G054800 Sobic009G054800 Sobic003G078200--Sobic009G054800 Sobic010G206200 Sobic010G206200 Sobic003G078200--Sobic010G206200 Sobic005G019700 Sobic005G019700 Sobic003G078200--Sobic005G019700 Sobic007G197800 Sobic007G197800 Sobic003G078200--Sobic007G197800 Sobic007G018300 Sobic007G018300 Sobic003G078200--Sobic007G018300 Sobic009G050300 Sobic009G050300 Sobic003G078200--Sobic009G050300 Sobic003G078200--Sobic001G018900 Sobic003G078200--Sobic006G116700
Octagon: transcription factors


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