Gene annotation
Transcriptome id Sobic.003G375100.2
Synonym
Functional annotation snRK1-interacting protein 1, putative, expressed
UniProt A0A1W0W0Q2
Pfam -
Panther DB PTHR34050:SF1 PTHR34050
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71310 : cobalt ion binding
RAP-DB (Rice) LOC_Os01g65560.1 : snRK1-interacting protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a039515 , Zm00025a026597
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G136600 expressed protein -
2 Sobic.003G276500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
3 Sobic.010G054300 expressed protein K17776: metaxin
4 Sobic.010G082850 - -
5 Sobic.004G252100 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
6 Sobic.002G074200 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
7 Sobic.003G289601 - -
8 Sobic.003G310600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial glycoprotein, putative, expressed -
9 Sobic.001G162800 expressed protein -
10 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
11 Sobic.003G125332 - K19347: SUN domain-containing protein 1/2
12 Sobic.009G080300 uncharacterized protein KIAA1310, putative, expressed K07020: uncharacterized protein
13 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
14 Sobic.003G128700 flavin monooxygenase, putative, expressed -
15 Sobic.005G080900 expressed protein -
16 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
17 Sobic.006G108600 prohibitin, putative, expressed K17080: prohibitin 1
18 Sobic.006G262300 expressed protein -
19 Sobic.006G261900 expressed protein -
20 Sobic.010G101100 E2F family transcription factor protein, putative, expressed -


Gene co-expression network
sample Sobic003G375100 Sobic003G375100 Sobic002G136600 Sobic002G136600 Sobic003G375100--Sobic002G136600 Sobic003G276500 Sobic003G276500 Sobic003G375100--Sobic003G276500 Sobic010G054300 Sobic010G054300 Sobic003G375100--Sobic010G054300 Sobic010G082850 Sobic010G082850 Sobic003G375100--Sobic010G082850 Sobic004G252100 Sobic004G252100 Sobic003G375100--Sobic004G252100 Sobic002G074200 Sobic002G074200 Sobic003G375100--Sobic002G074200 Sobic003G289601 Sobic003G289601 Sobic003G375100--Sobic003G289601 Sobic003G310600 Sobic003G310600 Sobic003G375100--Sobic003G310600 Sobic001G162800 Sobic001G162800 Sobic003G375100--Sobic001G162800 Sobic002G136600--Sobic002G074200 Sobic002G136600--Sobic003G375100 Sobic004G170500 Sobic004G170500 Sobic002G136600--Sobic004G170500 Sobic002G136600--Sobic004G252100 Sobic001G529400 Sobic001G529400 Sobic002G136600--Sobic001G529400 Sobic003G125332 Sobic003G125332 Sobic002G136600--Sobic003G125332 Sobic002G136600--Sobic003G276500 Sobic007G195800 Sobic007G195800 Sobic002G136600--Sobic007G195800 Sobic010G101100 Sobic010G101100 Sobic002G136600--Sobic010G101100 Sobic003G276500--Sobic003G375100 Sobic003G276500--Sobic002G136600 Sobic003G276500--Sobic010G101100 Sobic003G276500--Sobic003G125332 Sobic003G276500--Sobic002G074200 Sobic009G042500 Sobic009G042500 Sobic003G276500--Sobic009G042500 Sobic001G296000 Sobic001G296000 Sobic003G276500--Sobic001G296000 Sobic009G080300 Sobic009G080300 Sobic003G276500--Sobic009G080300 Sobic010G085000 Sobic010G085000 Sobic003G276500--Sobic010G085000 Sobic009G101700 Sobic009G101700 Sobic010G054300--Sobic009G101700 Sobic005G080900 Sobic005G080900 Sobic010G054300--Sobic005G080900 Sobic004G349700 Sobic004G349700 Sobic010G054300--Sobic004G349700 Sobic003G387900 Sobic003G387900 Sobic010G054300--Sobic003G387900 Sobic006G261900 Sobic006G261900 Sobic010G054300--Sobic006G261900 Sobic007G029400 Sobic007G029400 Sobic010G054300--Sobic007G029400 Sobic005G050500 Sobic005G050500 Sobic010G054300--Sobic005G050500 Sobic009G179100 Sobic009G179100 Sobic010G054300--Sobic009G179100 Sobic002G056200 Sobic002G056200 Sobic010G054300--Sobic002G056200 Sobic007G134900 Sobic007G134900 Sobic010G082850--Sobic007G134900 Sobic001G533500 Sobic001G533500 Sobic010G082850--Sobic001G533500 Sobic010G082850--Sobic004G252100 Sobic008G094600 Sobic008G094600 Sobic010G082850--Sobic008G094600 Sobic010G230700 Sobic010G230700 Sobic010G082850--Sobic010G230700 Sobic002G115000 Sobic002G115000 Sobic010G082850--Sobic002G115000 Sobic009G223300 Sobic009G223300 Sobic010G082850--Sobic009G223300 Sobic010G076400 Sobic010G076400 Sobic010G082850--Sobic010G076400 Sobic003G296800 Sobic003G296800 Sobic010G082850--Sobic003G296800 Sobic001G016500 Sobic001G016500 Sobic004G252100--Sobic001G016500 Sobic005G019700 Sobic005G019700 Sobic004G252100--Sobic005G019700 Sobic006G116700 Sobic006G116700 Sobic004G252100--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic004G252100--Sobic001G018900 Sobic007G019000 Sobic007G019000 Sobic004G252100--Sobic007G019000 Sobic007G190800 Sobic007G190800 Sobic004G252100--Sobic007G190800 Sobic004G252100--Sobic001G533500 Sobic009G050300 Sobic009G050300 Sobic004G252100--Sobic009G050300 Sobic007G197800 Sobic007G197800 Sobic004G252100--Sobic007G197800 Sobic002G074200--Sobic005G080900 Sobic003G160700 Sobic003G160700 Sobic002G074200--Sobic003G160700 Sobic002G372400 Sobic002G372400 Sobic002G074200--Sobic002G372400 Sobic006G159600 Sobic006G159600 Sobic002G074200--Sobic006G159600 Sobic006G067800 Sobic006G067800 Sobic002G074200--Sobic006G067800 Sobic003G078200 Sobic003G078200 Sobic002G074200--Sobic003G078200 Sobic003G436700 Sobic003G436700 Sobic002G074200--Sobic003G436700 Sobic002G074200--Sobic010G076400 Sobic006G137800 Sobic006G137800 Sobic002G074200--Sobic006G137800 Sobic003G289601--Sobic006G261900 Sobic007G184001 Sobic007G184001 Sobic003G289601--Sobic007G184001 Sobic001G047800 Sobic001G047800 Sobic003G289601--Sobic001G047800 Sobic006G262300 Sobic006G262300 Sobic003G289601--Sobic006G262300 Sobic003G289601--Sobic003G296800 Sobic009G173500 Sobic009G173500 Sobic003G289601--Sobic009G173500 Sobic002G329900 Sobic002G329900 Sobic003G289601--Sobic002G329900 Sobic003G289601--Sobic009G223300 Sobic002G309700 Sobic002G309700 Sobic003G289601--Sobic002G309700 Sobic001G081400 Sobic001G081400 Sobic003G310600--Sobic001G081400 Sobic003G244300 Sobic003G244300 Sobic003G310600--Sobic003G244300 Sobic001G371100 Sobic001G371100 Sobic003G310600--Sobic001G371100 Sobic004G047500 Sobic004G047500 Sobic003G310600--Sobic004G047500 Sobic001G018200 Sobic001G018200 Sobic003G310600--Sobic001G018200 Sobic006G108600 Sobic006G108600 Sobic003G310600--Sobic006G108600 Sobic008G113700 Sobic008G113700 Sobic003G310600--Sobic008G113700 Sobic001G107300 Sobic001G107300 Sobic003G310600--Sobic001G107300 Sobic005G164700 Sobic005G164700 Sobic003G310600--Sobic005G164700 Sobic001G347901 Sobic001G347901 Sobic001G162800--Sobic001G347901 Sobic009G233400 Sobic009G233400 Sobic001G162800--Sobic009G233400 Sobic001G162800--Sobic006G108600 Sobic006G013900 Sobic006G013900 Sobic001G162800--Sobic006G013900 Sobic002G054000 Sobic002G054000 Sobic001G162800--Sobic002G054000 Sobic001G162800--Sobic009G173500 Sobic008G135000 Sobic008G135000 Sobic001G162800--Sobic008G135000 Sobic001G162800--Sobic010G076400 Sobic004G342400 Sobic004G342400 Sobic001G162800--Sobic004G342400
Octagon: transcription factors


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