Gene annotation
Transcriptome id Sobic.009G080300.1
Synonym Sb09g006900
Functional annotation uncharacterized protein KIAA1310, putative, expressed
UniProt C5YUR5
Pfam PF12695
Panther DB PTHR13136
NCBI CDD -
KEGG Orthology K07020; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41850 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g12330.1 : uncharacterized protein KIAA1310, putative, expressed
MaizeGDB (Corn) Zm00025a043118
Brachypodium -
Barley HORVU7Hr1G036310.1 , HORVU7Hr1G036310.2 , HORVU7Hr1G036310.3 , HORVU7Hr1G036310.4
Wheat TraesCS7A02G176100 , TraesCS7D02G177400 , TraesCS7B02G081100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
2 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
3 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
4 Sobic.010G115200 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
5 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
6 Sobic.004G170500 histone H3, putative, expressed K11253: histone H3
7 Sobic.006G134900 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
8 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
9 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
10 Sobic.006G200000 RNA recognition motif, putative, expressed -
11 Sobic.007G152900 POLE2A - Putative DNA polymerase epsilon complex subunit, expressed K02325: DNA polymerase epsilon subunit 2
12 Sobic.002G136600 expressed protein -
13 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase
14 Sobic.007G134800 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
15 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
16 Sobic.010G156601 - -
17 Sobic.003G128700 flavin monooxygenase, putative, expressed -
18 Sobic.009G015900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
19 Sobic.008G135500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3


Gene co-expression network
sample Sobic009G080300 Sobic009G080300 Sobic003G396600 Sobic003G396600 Sobic009G080300--Sobic003G396600 Sobic009G088200 Sobic009G088200 Sobic009G080300--Sobic009G088200 Sobic003G300900 Sobic003G300900 Sobic009G080300--Sobic003G300900 Sobic010G115200 Sobic010G115200 Sobic009G080300--Sobic010G115200 Sobic009G109300 Sobic009G109300 Sobic009G080300--Sobic009G109300 Sobic004G170500 Sobic004G170500 Sobic009G080300--Sobic004G170500 Sobic006G134900 Sobic006G134900 Sobic009G080300--Sobic006G134900 Sobic004G355500 Sobic004G355500 Sobic009G080300--Sobic004G355500 Sobic002G280700 Sobic002G280700 Sobic009G080300--Sobic002G280700 Sobic006G200000 Sobic006G200000 Sobic003G396600--Sobic006G200000 Sobic004G349700 Sobic004G349700 Sobic003G396600--Sobic004G349700 Sobic003G011100 Sobic003G011100 Sobic003G396600--Sobic003G011100 Sobic005G080900 Sobic005G080900 Sobic003G396600--Sobic005G080900 Sobic003G396600--Sobic010G115200 Sobic003G396600--Sobic009G088200 Sobic002G101000 Sobic002G101000 Sobic003G396600--Sobic002G101000 Sobic010G069400 Sobic010G069400 Sobic003G396600--Sobic010G069400 Sobic001G397000 Sobic001G397000 Sobic003G396600--Sobic001G397000 Sobic009G088200--Sobic004G355500 Sobic009G088200--Sobic002G280700 Sobic007G152900 Sobic007G152900 Sobic009G088200--Sobic007G152900 Sobic009G088200--Sobic003G396600 Sobic007G079600 Sobic007G079600 Sobic009G088200--Sobic007G079600 Sobic001G078600 Sobic001G078600 Sobic009G088200--Sobic001G078600 Sobic001G103000 Sobic001G103000 Sobic009G088200--Sobic001G103000 Sobic010G032700 Sobic010G032700 Sobic009G088200--Sobic010G032700 Sobic005G047100 Sobic005G047100 Sobic009G088200--Sobic005G047100 Sobic008G170500 Sobic008G170500 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G128700 Sobic003G128700 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic003G300900--Sobic006G200000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic010G090100 Sobic010G090100 Sobic003G300900--Sobic010G090100 Sobic001G361600 Sobic001G361600 Sobic010G115200--Sobic001G361600 Sobic004G252100 Sobic004G252100 Sobic010G115200--Sobic004G252100 Sobic010G115200--Sobic004G349700 Sobic006G057200 Sobic006G057200 Sobic010G115200--Sobic006G057200 Sobic010G115200--Sobic003G396600 Sobic010G115200--Sobic006G200000 Sobic005G113300 Sobic005G113300 Sobic010G115200--Sobic005G113300 Sobic003G347900 Sobic003G347900 Sobic010G115200--Sobic003G347900 Sobic010G115200--Sobic010G069400 Sobic007G112100 Sobic007G112100 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic006G195500 Sobic006G195500 Sobic009G109300--Sobic006G195500 Sobic001G238900 Sobic001G238900 Sobic009G109300--Sobic001G238900 Sobic002G230800 Sobic002G230800 Sobic009G109300--Sobic002G230800 Sobic003G183700 Sobic003G183700 Sobic009G109300--Sobic003G183700 Sobic003G179500 Sobic003G179500 Sobic009G109300--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic009G109300--Sobic002G246900 Sobic006G076400 Sobic006G076400 Sobic004G170500--Sobic006G076400 Sobic003G057100 Sobic003G057100 Sobic004G170500--Sobic003G057100 Sobic004G170500--Sobic006G134900 Sobic004G170500--Sobic001G078600 Sobic004G279601 Sobic004G279601 Sobic004G170500--Sobic004G279601 Sobic004G170500--Sobic003G347900 Sobic006G081800 Sobic006G081800 Sobic004G170500--Sobic006G081800 Sobic002G136600 Sobic002G136600 Sobic004G170500--Sobic002G136600 Sobic001G205000 Sobic001G205000 Sobic004G170500--Sobic001G205000 Sobic006G134900--Sobic006G081800 Sobic001G169800 Sobic001G169800 Sobic006G134900--Sobic001G169800 Sobic007G176800 Sobic007G176800 Sobic006G134900--Sobic007G176800 Sobic006G134900--Sobic004G170500 Sobic006G189200 Sobic006G189200 Sobic006G134900--Sobic006G189200 Sobic006G116500 Sobic006G116500 Sobic006G134900--Sobic006G116500 Sobic001G142000 Sobic001G142000 Sobic006G134900--Sobic001G142000 Sobic006G134900--Sobic001G078600 Sobic001G105800 Sobic001G105800 Sobic006G134900--Sobic001G105800 Sobic004G355500--Sobic006G116500 Sobic001G456500 Sobic001G456500 Sobic004G355500--Sobic001G456500 Sobic004G355500--Sobic007G152900 Sobic004G355500--Sobic010G103700 Sobic004G355500--Sobic001G169800 Sobic004G197400 Sobic004G197400 Sobic004G355500--Sobic004G197400 Sobic004G355500--Sobic009G088200 Sobic004G355500--Sobic001G103000 Sobic008G129200 Sobic008G129200 Sobic004G355500--Sobic008G129200 Sobic002G280700--Sobic009G088200 Sobic001G528600 Sobic001G528600 Sobic002G280700--Sobic001G528600 Sobic002G280700--Sobic007G152900 Sobic002G280700--Sobic010G032700 Sobic002G280700--Sobic003G396600 Sobic001G371100 Sobic001G371100 Sobic002G280700--Sobic001G371100 Sobic003G294100 Sobic003G294100 Sobic002G280700--Sobic003G294100 Sobic005G164700 Sobic005G164700 Sobic002G280700--Sobic005G164700 Sobic002G280700--Sobic001G397000
Octagon: transcription factors


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