Gene annotation
Transcriptome id Sobic.008G135500.1
Synonym Sb08g018710
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YPY6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g38140.1 : expressed protein
MaizeGDB (Corn) Zm00025a004231
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G135500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
2 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
4 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
5 Sobic.003G128700 flavin monooxygenase, putative, expressed -
6 Sobic.003G196000 expressed protein -
7 Sobic.007G218100 transmembrane receptor, putative, expressed -
8 Sobic.001G197800 - -
9 Sobic.007G134800 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
10 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
11 Sobic.004G315300 DNA-3-methyladenine glycosylase, putative, expressed K03652: DNA-3-methyladenine glycosylase
12 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
13 Sobic.001G078700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
14 Sobic.001G410200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed K00434: L-ascorbate peroxidase
15 Sobic.004G263700 expressed protein -
16 Sobic.006G247800 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G311600 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
18 Sobic.010G190300 lipid phosphatase protein, putative, expressed -
19 Sobic.006G200000 RNA recognition motif, putative, expressed -
20 Sobic.001G397100 expressed protein -


Gene co-expression network
sample Sobic008G135500 Sobic008G135500 Sobic003G300900 Sobic003G300900 Sobic008G135500--Sobic003G300900 Sobic008G170500 Sobic008G170500 Sobic008G135500--Sobic008G170500 Sobic010G090100 Sobic010G090100 Sobic008G135500--Sobic010G090100 Sobic006G245500 Sobic006G245500 Sobic008G135500--Sobic006G245500 Sobic003G128700 Sobic003G128700 Sobic008G135500--Sobic003G128700 Sobic003G196000 Sobic003G196000 Sobic008G135500--Sobic003G196000 Sobic007G218100 Sobic007G218100 Sobic008G135500--Sobic007G218100 Sobic001G197800 Sobic001G197800 Sobic008G135500--Sobic001G197800 Sobic007G134800 Sobic007G134800 Sobic008G135500--Sobic007G134800 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic003G300900--Sobic008G135500 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic003G300900--Sobic006G245500 Sobic003G300900--Sobic010G090100 Sobic008G170500--Sobic003G300900 Sobic008G170500--Sobic006G245500 Sobic008G170500--Sobic008G135500 Sobic001G205800 Sobic001G205800 Sobic008G170500--Sobic001G205800 Sobic008G170500--Sobic010G090100 Sobic008G170500--Sobic001G197800 Sobic008G170500--Sobic003G128700 Sobic001G385900 Sobic001G385900 Sobic008G170500--Sobic001G385900 Sobic003G019400 Sobic003G019400 Sobic008G170500--Sobic003G019400 Sobic010G090100--Sobic003G019400 Sobic010G090100--Sobic001G197800 Sobic010G090100--Sobic008G170500 Sobic010G090100--Sobic003G300900 Sobic010G090100--Sobic006G245500 Sobic010G090100--Sobic008G135500 Sobic004G029450 Sobic004G029450 Sobic010G090100--Sobic004G029450 Sobic001G261400 Sobic001G261400 Sobic010G090100--Sobic001G261400 Sobic002G230900 Sobic002G230900 Sobic010G090100--Sobic002G230900 Sobic006G245500--Sobic008G170500 Sobic006G245500--Sobic003G128700 Sobic006G245500--Sobic003G300900 Sobic008G034300 Sobic008G034300 Sobic006G245500--Sobic008G034300 Sobic006G245500--Sobic010G090100 Sobic006G245500--Sobic001G205800 Sobic001G397100 Sobic001G397100 Sobic006G245500--Sobic001G397100 Sobic006G245500--Sobic008G135500 Sobic006G245500--Sobic001G197800 Sobic003G128700--Sobic003G300900 Sobic003G128700--Sobic006G245500 Sobic003G128700--Sobic008G170500 Sobic003G386800 Sobic003G386800 Sobic003G128700--Sobic003G386800 Sobic003G128700--Sobic001G397100 Sobic003G128700--Sobic008G135500 Sobic003G128700--Sobic010G090100 Sobic002G242300 Sobic002G242300 Sobic003G128700--Sobic002G242300 Sobic003G128700--Sobic008G034300 Sobic004G311600 Sobic004G311600 Sobic003G196000--Sobic004G311600 Sobic003G350400 Sobic003G350400 Sobic003G196000--Sobic003G350400 Sobic003G196000--Sobic002G230900 Sobic006G247800 Sobic006G247800 Sobic003G196000--Sobic006G247800 Sobic003G196000--Sobic007G218100 Sobic006G027900 Sobic006G027900 Sobic003G196000--Sobic006G027900 Sobic003G196000--Sobic008G135500 Sobic002G286700 Sobic002G286700 Sobic003G196000--Sobic002G286700 Sobic003G246800 Sobic003G246800 Sobic003G196000--Sobic003G246800 Sobic001G532800 Sobic001G532800 Sobic007G218100--Sobic001G532800 Sobic001G304800 Sobic001G304800 Sobic007G218100--Sobic001G304800 Sobic004G052200 Sobic004G052200 Sobic007G218100--Sobic004G052200 Sobic002G230800 Sobic002G230800 Sobic007G218100--Sobic002G230800 Sobic007G218100--Sobic003G246800 Sobic006G275500 Sobic006G275500 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic001G104500 Sobic001G104500 Sobic007G218100--Sobic001G104500 Sobic008G159901 Sobic008G159901 Sobic007G218100--Sobic008G159901 Sobic008G075350 Sobic008G075350 Sobic001G197800--Sobic008G075350 Sobic001G386600 Sobic001G386600 Sobic001G197800--Sobic001G386600 Sobic001G197800--Sobic010G090100 Sobic001G197800--Sobic003G019400 Sobic001G197800--Sobic008G170500 Sobic004G347500 Sobic004G347500 Sobic001G197800--Sobic004G347500 Sobic001G296700 Sobic001G296700 Sobic001G197800--Sobic001G296700 Sobic006G013300 Sobic006G013300 Sobic001G197800--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic001G197800--Sobic002G232900 Sobic007G134800--Sobic001G397000 Sobic007G134800--Sobic003G300900 Sobic007G134800--Sobic001G410200 Sobic002G101000 Sobic002G101000 Sobic007G134800--Sobic002G101000 Sobic007G112100 Sobic007G112100 Sobic007G134800--Sobic007G112100 Sobic003G179000 Sobic003G179000 Sobic007G134800--Sobic003G179000 Sobic007G029400 Sobic007G029400 Sobic007G134800--Sobic007G029400 Sobic001G336050 Sobic001G336050 Sobic007G134800--Sobic001G336050 Sobic007G079600 Sobic007G079600 Sobic007G134800--Sobic007G079600
Octagon: transcription factors


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