Gene annotation
| Transcriptome id | Sobic.010G190300.1 |
|---|---|
| Synonym | ATLPP2, ATPAP2, LPP2, Sb10g024030 |
| Functional annotation | lipid phosphatase protein, putative, expressed |
| UniProt | C5Z5T0 |
| Pfam | PF01569 |
| Panther DB | PTHR10165 PTHR10165:SF93 |
| NCBI CDD | KOG3030; Lipid phosphate phosphatase and related enzymes of the PAP2 family |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G15080 : lipid phosphate phosphatase 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g47660.1 : lipid phosphatase protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a044455 |
| Brachypodium | KQK05043 |
| Barley | HORVU1Hr1G082900.8 , HORVU1Hr1G082900.9 , HORVU1Hr1G082900.1 , HORVU1Hr1G082900.2 , HORVU1Hr1G082900.3 , HORVU1Hr1G082900.4 , HORVU1Hr1G082900.5 , HORVU1Hr1G082900.6 , HORVU1Hr1G082900.7 , HORVU1Hr1G082900.12 , HORVU1Hr1G082900.13 , HORVU1Hr1G082900.10 , HORVU1Hr1G082900.11 , HORVU1Hr1G082900.14 , HORVU1Hr1G082900.15 |
| Wheat | TraesCS1D02G379800 , TraesCS1A02G373000 , TraesCS1B02G393200 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G300900 | AAA-type ATPase family protein, putative, expressed | K07767: katanin p60 ATPase-containing subunit A1 |
| 2 | Sobic.001G410200 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed | K00434: L-ascorbate peroxidase |
| 3 | Sobic.003G340100 | "domain confirmed by Pfam database, expressed in leaf, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed | - |
| 4 | Sobic.009G111400 | 3-hydroxyacyl-CoA dehydrogenase, putative, expressed | K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase |
| 5 | Sobic.006G200000 | RNA recognition motif, putative, expressed | - |
| 6 | Sobic.004G234100 | phosphoglycerate mutase, putative, expressed | - |
| 7 | Sobic.004G258900 | - | - |
| 8 | Sobic.003G360100 | expressed protein | - |
| 9 | Sobic.009G181800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed | K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase |
| 10 | Sobic.010G138300 | DUF617 domain containing protein, expressed | - |
| 11 | Sobic.010G115200 | ribosomal protein L7Ae, putative, expressed | K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2 |
| 12 | Sobic.005G215400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed | - |
| 13 | Sobic.003G396600 | down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed | - |
| 14 | Sobic.001G430100 | - | - |
| 15 | Sobic.001G078700 | Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed | - |
| 16 | Sobic.008G170500 | AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed | - |
| 17 | Sobic.002G123500 | dehydrodolichyl diphosphate synthase, putative, expressed | K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase |
| 18 | Sobic.003G307400 | EF hand family protein, putative, expressed | K13448: calcium-binding protein CML |
| 19 | Sobic.007G050200 | DNA binding protein, putative, expressed | - |
| 20 | Sobic.009G152600 | -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed | K01507: inorganic pyrophosphatase |
Gene co-expression network
Octagon: transcription factors
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