Gene annotation
Transcriptome id Sobic.003G340100.1,Sobic.003G340100.3,Sobic.003G340100.4,Sobic.003G340100.2
Synonym Sb03g038410, lateral organ boundaries, ASL11, LBD15, SbLBD19
Functional annotation "domain confirmed by Pfam database, expressed in leaf, expression induced by BR treatment" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt A0A1W0W049 , A0A1B6Q6U2 , A0A1W0W074 , A0A1W0W051
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40470 : LOB domain-containing protein 15
RAP-DB (Rice) LOC_Os01g60960.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001949 , Zm00025a036898 , Zm00025a027034 , Zm00025a043472
Brachypodium KQK13888 , KQK10377 , PNT71725 , KQK07317
Barley HORVU3Hr1G088440.9 , HORVU3Hr1G088440.8 , HORVU3Hr1G088440.1 , HORVU3Hr1G088440.3 , HORVU3Hr1G088440.2 , HORVU3Hr1G088440.5 , HORVU3Hr1G088440.4 , HORVU3Hr1G088440.7 , HORVU3Hr1G088440.6 , HORVU1Hr1G024490.2 , HORVU1Hr1G024490.1 , HORVU3Hr1G088440.10
Wheat TraesCS1D02G113100 , TraesCS1B02G235700 , TraesCS4B02G197100 , TraesCS1D02G224000 , TraesCS1B02G131900 , TraesCS1B02G131900 , TraesCS3A02G346300 , TraesCS3B02G378100 , TraesCS3D02G340000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G138300 DUF617 domain containing protein, expressed -
2 Sobic.006G227500 - -
3 Sobic.009G221500 lipid phosphatase protein, putative, expressed -
4 Sobic.001G430100 - -
5 Sobic.007G050200 DNA binding protein, putative, expressed -
6 Sobic.010G190300 lipid phosphatase protein, putative, expressed -
7 Sobic.008G102800 expressed protein -
8 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
9 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
10 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.004G323300 SCP-like extracellular protein, expressed -
12 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
13 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
14 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
15 Sobic.001G410200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed K00434: L-ascorbate peroxidase
16 Sobic.009G199001 - -
17 Sobic.003G121000 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G245800 expressed protein -
19 Sobic.010G027300 DNA binding protein, putative, expressed -
20 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G340100 Sobic003G340100 Sobic010G138300 Sobic010G138300 Sobic003G340100--Sobic010G138300 Sobic006G227500 Sobic006G227500 Sobic003G340100--Sobic006G227500 Sobic009G221500 Sobic009G221500 Sobic003G340100--Sobic009G221500 Sobic001G430100 Sobic001G430100 Sobic003G340100--Sobic001G430100 Sobic007G050200 Sobic007G050200 Sobic003G340100--Sobic007G050200 Sobic010G190300 Sobic010G190300 Sobic003G340100--Sobic010G190300 Sobic008G102800 Sobic008G102800 Sobic003G340100--Sobic008G102800 Sobic002G154600 Sobic002G154600 Sobic003G340100--Sobic002G154600 Sobic003G300900 Sobic003G300900 Sobic003G340100--Sobic003G300900 Sobic001G514200 Sobic001G514200 Sobic010G138300--Sobic001G514200 Sobic009G199001 Sobic009G199001 Sobic010G138300--Sobic009G199001 Sobic010G138300--Sobic008G102800 Sobic010G138300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G138300--Sobic001G245800 Sobic009G074500 Sobic009G074500 Sobic010G138300--Sobic009G074500 Sobic010G138300--Sobic003G340100 Sobic010G138300--Sobic007G050200 Sobic010G138300--Sobic006G227500 Sobic004G323300 Sobic004G323300 Sobic006G227500--Sobic004G323300 Sobic006G227500--Sobic007G050200 Sobic009G219200 Sobic009G219200 Sobic006G227500--Sobic009G219200 Sobic004G322100 Sobic004G322100 Sobic006G227500--Sobic004G322100 Sobic003G140700 Sobic003G140700 Sobic006G227500--Sobic003G140700 Sobic001G229000 Sobic001G229000 Sobic006G227500--Sobic001G229000 Sobic006G227500--Sobic009G221500 Sobic001G438200 Sobic001G438200 Sobic006G227500--Sobic001G438200 Sobic001G237800 Sobic001G237800 Sobic006G227500--Sobic001G237800 Sobic009G221500--Sobic007G050200 Sobic006G256900 Sobic006G256900 Sobic009G221500--Sobic006G256900 Sobic009G221500--Sobic009G219200 Sobic009G221500--Sobic004G322100 Sobic010G148800 Sobic010G148800 Sobic009G221500--Sobic010G148800 Sobic009G221500--Sobic009G199001 Sobic009G221500--Sobic004G323300 Sobic009G221500--Sobic001G438200 Sobic009G221500--Sobic001G430100 Sobic002G183700 Sobic002G183700 Sobic001G430100--Sobic002G183700 Sobic003G311800 Sobic003G311800 Sobic001G430100--Sobic003G311800 Sobic001G430100--Sobic007G050200 Sobic001G049900 Sobic001G049900 Sobic001G430100--Sobic001G049900 Sobic002G001700 Sobic002G001700 Sobic001G430100--Sobic002G001700 Sobic004G348800 Sobic004G348800 Sobic001G430100--Sobic004G348800 Sobic004G297900 Sobic004G297900 Sobic001G430100--Sobic004G297900 Sobic006G197100 Sobic006G197100 Sobic001G430100--Sobic006G197100 Sobic009G109000 Sobic009G109000 Sobic001G430100--Sobic009G109000 Sobic007G050200--Sobic004G322100 Sobic007G050200--Sobic004G323300 Sobic007G050200--Sobic009G221500 Sobic007G050200--Sobic003G140700 Sobic007G050200--Sobic001G430100 Sobic007G050200--Sobic006G256900 Sobic001G058300 Sobic001G058300 Sobic007G050200--Sobic001G058300 Sobic007G050200--Sobic009G199001 Sobic007G050200--Sobic009G219200 Sobic010G190300--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic010G190300--Sobic001G410200 Sobic010G190300--Sobic003G340100 Sobic009G111400 Sobic009G111400 Sobic010G190300--Sobic009G111400 Sobic006G200000 Sobic006G200000 Sobic010G190300--Sobic006G200000 Sobic004G234100 Sobic004G234100 Sobic010G190300--Sobic004G234100 Sobic004G258900 Sobic004G258900 Sobic010G190300--Sobic004G258900 Sobic003G360100 Sobic003G360100 Sobic010G190300--Sobic003G360100 Sobic009G181800 Sobic009G181800 Sobic010G190300--Sobic009G181800 Sobic008G102800--Sobic006G256900 Sobic003G236600 Sobic003G236600 Sobic008G102800--Sobic003G236600 Sobic008G102800--Sobic002G001700 Sobic008G102800--Sobic001G430100 Sobic008G102800--Sobic009G221500 Sobic008G102800--Sobic006G197100 Sobic008G102800--Sobic010G138300 Sobic008G102800--Sobic009G199001 Sobic001G264000 Sobic001G264000 Sobic008G102800--Sobic001G264000 Sobic007G218800 Sobic007G218800 Sobic002G154600--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic002G154600--Sobic002G261500 Sobic002G154600--Sobic001G430100 Sobic009G088900 Sobic009G088900 Sobic002G154600--Sobic009G088900 Sobic008G055100 Sobic008G055100 Sobic002G154600--Sobic008G055100 Sobic002G154600--Sobic002G183700 Sobic002G154600--Sobic003G311800 Sobic002G154600--Sobic004G297900 Sobic003G121100 Sobic003G121100 Sobic002G154600--Sobic003G121100 Sobic008G170500 Sobic008G170500 Sobic003G300900--Sobic008G170500 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G128700 Sobic003G128700 Sobic003G300900--Sobic003G128700 Sobic003G300900--Sobic001G410200 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic010G090100 Sobic010G090100 Sobic003G300900--Sobic010G090100
Octagon: transcription factors


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