Gene annotation
Transcriptome id Sobic.008G170500.1
Synonym Sb08g021520, PID, ABR
Functional annotation AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1Z5R840
Pfam PF07714 PF00069
Panther DB PTHR24351 PTHR24351:SF60
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT2G34650 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os12g42020.1 : AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a003375 , Zm00025a004697 , Zm00025a007290 , Zm00025a051944 , Zm00025a040460 , Zm00025a033478
Brachypodium KQJ92224 , KQK14002 , KQJ97814
Barley HORVU5Hr1G093040.3 , HORVU5Hr1G093040.2 , HORVU5Hr1G093040.4 , HORVU5Hr1G009390.1 , HORVU5Hr1G041960.8 , HORVU5Hr1G041960.3 , HORVU5Hr1G041960.2 , HORVU5Hr1G041960.1 , HORVU5Hr1G041960.7 , HORVU5Hr1G041960.6 , HORVU5Hr1G041960.5 , HORVU5Hr1G041960.4 , HORVU1Hr1G055800.14 , HORVU1Hr1G055800.11 , HORVU1Hr1G055800.10 , HORVU1Hr1G055800.13 , HORVU1Hr1G055800.12 , HORVU3Hr1G024030.2 , HORVU3Hr1G024030.3 , HORVU3Hr1G024030.1 , HORVU1Hr1G055800.1 , HORVU1Hr1G055800.3 , HORVU1Hr1G055800.2 , HORVU1Hr1G055800.5 , HORVU1Hr1G055800.4 , HORVU1Hr1G055800.9 , HORVU1Hr1G055800.8 , HORVU1Hr1G055800.7 , HORVU1Hr1G055800.6
Wheat TraesCS5B02G128400 , TraesCS1B02G232000 , TraesCS1D02G220100 , TraesCS3D02G129100 , TraesCS5D02G137200 , TraesCS1A02G218500 , TraesCS3B02G147300 , TraesCS3A02G128200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
2 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.008G135500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G205800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed -
5 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
6 Sobic.001G197800 - -
7 Sobic.003G128700 flavin monooxygenase, putative, expressed -
8 Sobic.001G385900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@stress responsive protein, putative, expressed -
9 Sobic.003G019400 expressed protein -
10 Sobic.010G190300 lipid phosphatase protein, putative, expressed -
11 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
12 Sobic.004G029450 - -
13 Sobic.010G134900 DNA binding protein, putative, expressed -
14 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase
15 Sobic.001G410200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed K00434: L-ascorbate peroxidase
16 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
17 Sobic.001G397100 expressed protein -
18 Sobic.003G386800 auxin-responsive protein, putative, expressed -
19 Sobic.006G200000 RNA recognition motif, putative, expressed -
20 Sobic.001G112500 ZF-HD protein dimerisation region containing protein, expressed -


Gene co-expression network
sample Sobic008G170500 Sobic008G170500 Sobic003G300900 Sobic003G300900 Sobic008G170500--Sobic003G300900 Sobic006G245500 Sobic006G245500 Sobic008G170500--Sobic006G245500 Sobic008G135500 Sobic008G135500 Sobic008G170500--Sobic008G135500 Sobic001G205800 Sobic001G205800 Sobic008G170500--Sobic001G205800 Sobic010G090100 Sobic010G090100 Sobic008G170500--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic008G170500--Sobic001G197800 Sobic003G128700 Sobic003G128700 Sobic008G170500--Sobic003G128700 Sobic001G385900 Sobic001G385900 Sobic008G170500--Sobic001G385900 Sobic003G019400 Sobic003G019400 Sobic008G170500--Sobic003G019400 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic003G300900--Sobic008G135500 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic003G300900--Sobic006G245500 Sobic003G300900--Sobic010G090100 Sobic006G245500--Sobic008G170500 Sobic006G245500--Sobic003G128700 Sobic006G245500--Sobic003G300900 Sobic008G034300 Sobic008G034300 Sobic006G245500--Sobic008G034300 Sobic006G245500--Sobic010G090100 Sobic006G245500--Sobic001G205800 Sobic001G397100 Sobic001G397100 Sobic006G245500--Sobic001G397100 Sobic006G245500--Sobic008G135500 Sobic006G245500--Sobic001G197800 Sobic008G135500--Sobic003G300900 Sobic008G135500--Sobic008G170500 Sobic008G135500--Sobic010G090100 Sobic008G135500--Sobic006G245500 Sobic008G135500--Sobic003G128700 Sobic003G196000 Sobic003G196000 Sobic008G135500--Sobic003G196000 Sobic007G218100 Sobic007G218100 Sobic008G135500--Sobic007G218100 Sobic008G135500--Sobic001G197800 Sobic007G134800 Sobic007G134800 Sobic008G135500--Sobic007G134800 Sobic001G205800--Sobic008G170500 Sobic001G205800--Sobic001G385900 Sobic001G205800--Sobic008G034300 Sobic001G205800--Sobic006G245500 Sobic010G221800 Sobic010G221800 Sobic001G205800--Sobic010G221800 Sobic010G164400 Sobic010G164400 Sobic001G205800--Sobic010G164400 Sobic001G205800--Sobic003G128700 Sobic003G386800 Sobic003G386800 Sobic001G205800--Sobic003G386800 Sobic001G205800--Sobic003G300900 Sobic010G090100--Sobic003G019400 Sobic010G090100--Sobic001G197800 Sobic010G090100--Sobic008G170500 Sobic010G090100--Sobic003G300900 Sobic010G090100--Sobic006G245500 Sobic010G090100--Sobic008G135500 Sobic004G029450 Sobic004G029450 Sobic010G090100--Sobic004G029450 Sobic001G261400 Sobic001G261400 Sobic010G090100--Sobic001G261400 Sobic002G230900 Sobic002G230900 Sobic010G090100--Sobic002G230900 Sobic008G075350 Sobic008G075350 Sobic001G197800--Sobic008G075350 Sobic001G386600 Sobic001G386600 Sobic001G197800--Sobic001G386600 Sobic001G197800--Sobic010G090100 Sobic001G197800--Sobic003G019400 Sobic001G197800--Sobic008G170500 Sobic004G347500 Sobic004G347500 Sobic001G197800--Sobic004G347500 Sobic001G296700 Sobic001G296700 Sobic001G197800--Sobic001G296700 Sobic006G013300 Sobic006G013300 Sobic001G197800--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic001G197800--Sobic002G232900 Sobic003G128700--Sobic003G300900 Sobic003G128700--Sobic006G245500 Sobic003G128700--Sobic008G170500 Sobic003G128700--Sobic003G386800 Sobic003G128700--Sobic001G397100 Sobic003G128700--Sobic008G135500 Sobic003G128700--Sobic010G090100 Sobic002G242300 Sobic002G242300 Sobic003G128700--Sobic002G242300 Sobic003G128700--Sobic008G034300 Sobic001G385900--Sobic001G205800 Sobic001G385900--Sobic008G170500 Sobic001G385900--Sobic010G164400 Sobic002G374650 Sobic002G374650 Sobic001G385900--Sobic002G374650 Sobic001G385900--Sobic010G221800 Sobic004G108100 Sobic004G108100 Sobic001G385900--Sobic004G108100 Sobic001G385900--Sobic003G300900 Sobic002G389100 Sobic002G389100 Sobic001G385900--Sobic002G389100 Sobic002G416500 Sobic002G416500 Sobic001G385900--Sobic002G416500 Sobic004G214300 Sobic004G214300 Sobic003G019400--Sobic004G214300 Sobic003G419300 Sobic003G419300 Sobic003G019400--Sobic003G419300 Sobic003G019400--Sobic010G090100 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic006G124200 Sobic006G124200 Sobic003G019400--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G019400--Sobic009G102400 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000
Octagon: transcription factors


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