Gene annotation
Transcriptome id Sobic.001G197800.2
Synonym
Functional annotation -
UniProt A0A1Z5S6I6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G075350 - -
2 Sobic.001G386600 homeobox domain containing protein, expressed -
3 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
4 Sobic.003G019400 expressed protein -
5 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
7 Sobic.001G296700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
8 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -
9 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
10 Sobic.009G052600 universal stress protein domain containing protein, putative, expressed -
11 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
12 Sobic.001G261420 - -
13 Sobic.002G350000 ubiquitin-like protein SMT3, putative, expressed K12160: SUMO, small ubiquitin-related modifier
14 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
15 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
16 Sobic.002G204350 - -
17 Sobic.004G264200 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.001G004600 expressed protein -
19 Sobic.002G049900 - -
20 Sobic.005G139150 - -


Gene co-expression network
sample Sobic001G197800 Sobic001G197800 Sobic008G075350 Sobic008G075350 Sobic001G197800--Sobic008G075350 Sobic001G386600 Sobic001G386600 Sobic001G197800--Sobic001G386600 Sobic010G090100 Sobic010G090100 Sobic001G197800--Sobic010G090100 Sobic003G019400 Sobic003G019400 Sobic001G197800--Sobic003G019400 Sobic008G170500 Sobic008G170500 Sobic001G197800--Sobic008G170500 Sobic004G347500 Sobic004G347500 Sobic001G197800--Sobic004G347500 Sobic001G296700 Sobic001G296700 Sobic001G197800--Sobic001G296700 Sobic006G013300 Sobic006G013300 Sobic001G197800--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic001G197800--Sobic002G232900 Sobic005G139150 Sobic005G139150 Sobic008G075350--Sobic005G139150 Sobic008G075350--Sobic001G386600 Sobic001G261420 Sobic001G261420 Sobic008G075350--Sobic001G261420 Sobic002G204350 Sobic002G204350 Sobic008G075350--Sobic002G204350 Sobic001G298032 Sobic001G298032 Sobic008G075350--Sobic001G298032 Sobic007G191500 Sobic007G191500 Sobic008G075350--Sobic007G191500 Sobic001G122600 Sobic001G122600 Sobic008G075350--Sobic001G122600 Sobic001G386600--Sobic001G261420 Sobic001G386600--Sobic008G075350 Sobic001G386600--Sobic007G191500 Sobic001G386600--Sobic002G204350 Sobic001G004600 Sobic001G004600 Sobic001G386600--Sobic001G004600 Sobic005G021000 Sobic005G021000 Sobic001G386600--Sobic005G021000 Sobic001G386600--Sobic004G347500 Sobic001G165600 Sobic001G165600 Sobic001G386600--Sobic001G165600 Sobic001G386600--Sobic001G122600 Sobic010G090100--Sobic003G019400 Sobic010G090100--Sobic001G197800 Sobic010G090100--Sobic008G170500 Sobic003G300900 Sobic003G300900 Sobic010G090100--Sobic003G300900 Sobic006G245500 Sobic006G245500 Sobic010G090100--Sobic006G245500 Sobic008G135500 Sobic008G135500 Sobic010G090100--Sobic008G135500 Sobic004G029450 Sobic004G029450 Sobic010G090100--Sobic004G029450 Sobic001G261400 Sobic001G261400 Sobic010G090100--Sobic001G261400 Sobic002G230900 Sobic002G230900 Sobic010G090100--Sobic002G230900 Sobic004G214300 Sobic004G214300 Sobic003G019400--Sobic004G214300 Sobic003G419300 Sobic003G419300 Sobic003G019400--Sobic003G419300 Sobic003G019400--Sobic010G090100 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic006G124200 Sobic006G124200 Sobic003G019400--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G019400--Sobic009G102400 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic008G170500--Sobic003G300900 Sobic008G170500--Sobic006G245500 Sobic008G170500--Sobic008G135500 Sobic001G205800 Sobic001G205800 Sobic008G170500--Sobic001G205800 Sobic008G170500--Sobic010G090100 Sobic008G170500--Sobic001G197800 Sobic003G128700 Sobic003G128700 Sobic008G170500--Sobic003G128700 Sobic001G385900 Sobic001G385900 Sobic008G170500--Sobic001G385900 Sobic008G170500--Sobic003G019400 Sobic004G347500--Sobic005G021000 Sobic002G177600 Sobic002G177600 Sobic004G347500--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic004G347500--Sobic002G240000 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic004G347500--Sobic002G232900 Sobic004G347500--Sobic007G191500 Sobic006G217800 Sobic006G217800 Sobic004G347500--Sobic006G217800 Sobic004G347500--Sobic001G386600 Sobic001G296700--Sobic008G075350 Sobic001G296700--Sobic005G139150 Sobic001G296700--Sobic001G197800 Sobic001G296700--Sobic001G386600 Sobic009G052600 Sobic009G052600 Sobic001G296700--Sobic009G052600 Sobic001G296700--Sobic001G261420 Sobic001G296700--Sobic002G204350 Sobic009G230000 Sobic009G230000 Sobic001G296700--Sobic009G230000 Sobic002G350000 Sobic002G350000 Sobic001G296700--Sobic002G350000 Sobic009G208600 Sobic009G208600 Sobic006G013300--Sobic009G208600 Sobic005G105600 Sobic005G105600 Sobic006G013300--Sobic005G105600 Sobic006G013300--Sobic002G232900 Sobic004G029900 Sobic004G029900 Sobic006G013300--Sobic004G029900 Sobic001G508200 Sobic001G508200 Sobic006G013300--Sobic001G508200 Sobic003G419500 Sobic003G419500 Sobic006G013300--Sobic003G419500 Sobic006G013300--Sobic005G021000 Sobic006G013300--Sobic004G347500 Sobic006G013300--Sobic002G240000 Sobic002G232900--Sobic009G208600 Sobic002G232900--Sobic006G013300 Sobic002G232900--Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic002G232900--Sobic001G254800 Sobic002G232900--Sobic003G419500 Sobic002G232900--Sobic004G347500 Sobic002G232900--Sobic004G029900 Sobic002G232900--Sobic002G240000 Sobic002G232900--Sobic005G105600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.