Gene annotation
Transcriptome id Sobic.003G019400.1
Synonym CLE13, Sb03g001875
Functional annotation expressed protein
UniProt A0A1B6Q0W2
Pfam -
Panther DB PTHR34359 PTHR34359:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73965 : CLAVATA3/ESR-RELATED 13
RAP-DB (Rice) LOC_Os02g21890.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
2 Sobic.003G419300 xylanase inhibitor, putative, expressed -
3 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
4 Sobic.001G197800 - -
5 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
6 Sobic.006G124200 expressed protein -
7 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.004G029450 - -
9 Sobic.002G091000 - -
10 Sobic.010G134900 DNA binding protein, putative, expressed -
11 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.010G155100 NAC domain containing protein, putative, expressed -
13 Sobic.004G264200 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
15 Sobic.001G542200 expansin precursor, putative, expressed -
16 Sobic.003G324600 transcription factor-related, putative, expressed -
17 Sobic.004G112200 no apical meristem protein, putative, expressed -
18 Sobic.009G058600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
19 Sobic.006G130600 TGF-beta receptor, type I/II extracellular region, putative, expressed -
20 Sobic.005G009400 expressed protein -


Gene co-expression network
sample Sobic003G019400 Sobic003G019400 Sobic004G214300 Sobic004G214300 Sobic003G019400--Sobic004G214300 Sobic003G419300 Sobic003G419300 Sobic003G019400--Sobic003G419300 Sobic010G090100 Sobic010G090100 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic001G261400 Sobic001G261400 Sobic003G019400--Sobic001G261400 Sobic006G124200 Sobic006G124200 Sobic003G019400--Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic003G019400--Sobic009G102400 Sobic004G029450 Sobic004G029450 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic004G214300--Sobic009G102400 Sobic004G214300--Sobic006G124200 Sobic010G155100 Sobic010G155100 Sobic004G214300--Sobic010G155100 Sobic010G134900 Sobic010G134900 Sobic004G214300--Sobic010G134900 Sobic004G214300--Sobic001G261400 Sobic004G214300--Sobic003G419300 Sobic004G214300--Sobic003G019400 Sobic002G239700 Sobic002G239700 Sobic004G214300--Sobic002G239700 Sobic004G112200 Sobic004G112200 Sobic004G214300--Sobic004G112200 Sobic001G232000 Sobic001G232000 Sobic003G419300--Sobic001G232000 Sobic003G419400 Sobic003G419400 Sobic003G419300--Sobic003G419400 Sobic008G035800 Sobic008G035800 Sobic003G419300--Sobic008G035800 Sobic009G058600 Sobic009G058600 Sobic003G419300--Sobic009G058600 Sobic003G419300--Sobic002G239700 Sobic003G419300--Sobic004G214300 Sobic003G324600 Sobic003G324600 Sobic003G419300--Sobic003G324600 Sobic003G419300--Sobic004G112200 Sobic009G208700 Sobic009G208700 Sobic003G419300--Sobic009G208700 Sobic010G090100--Sobic003G019400 Sobic010G090100--Sobic001G197800 Sobic008G170500 Sobic008G170500 Sobic010G090100--Sobic008G170500 Sobic003G300900 Sobic003G300900 Sobic010G090100--Sobic003G300900 Sobic006G245500 Sobic006G245500 Sobic010G090100--Sobic006G245500 Sobic008G135500 Sobic008G135500 Sobic010G090100--Sobic008G135500 Sobic010G090100--Sobic004G029450 Sobic010G090100--Sobic001G261400 Sobic002G230900 Sobic002G230900 Sobic010G090100--Sobic002G230900 Sobic008G075350 Sobic008G075350 Sobic001G197800--Sobic008G075350 Sobic001G386600 Sobic001G386600 Sobic001G197800--Sobic001G386600 Sobic001G197800--Sobic010G090100 Sobic001G197800--Sobic003G019400 Sobic001G197800--Sobic008G170500 Sobic004G347500 Sobic004G347500 Sobic001G197800--Sobic004G347500 Sobic001G296700 Sobic001G296700 Sobic001G197800--Sobic001G296700 Sobic006G013300 Sobic006G013300 Sobic001G197800--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic001G197800--Sobic002G232900 Sobic001G261400--Sobic010G134900 Sobic001G261400--Sobic004G214300 Sobic001G261400--Sobic009G102400 Sobic004G263700 Sobic004G263700 Sobic001G261400--Sobic004G263700 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic002G218600 Sobic002G218600 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic001G261400--Sobic010G155100 Sobic006G124200--Sobic009G102400 Sobic006G124200--Sobic004G214300 Sobic006G124200--Sobic001G261400 Sobic005G105600 Sobic005G105600 Sobic006G124200--Sobic005G105600 Sobic006G124200--Sobic006G013300 Sobic006G124200--Sobic010G134900 Sobic006G124200--Sobic003G019400 Sobic006G124200--Sobic010G177300 Sobic003G395200 Sobic003G395200 Sobic006G124200--Sobic003G395200 Sobic009G102400--Sobic006G124200 Sobic009G102400--Sobic004G214300 Sobic009G102400--Sobic001G261400 Sobic009G102400--Sobic010G155100 Sobic009G102400--Sobic010G134900 Sobic009G102400--Sobic010G177300 Sobic009G102400--Sobic006G013300 Sobic009G102400--Sobic005G105600 Sobic009G102400--Sobic004G112200 Sobic004G029450--Sobic003G019400 Sobic004G029450--Sobic004G263700 Sobic004G029450--Sobic001G261400 Sobic004G029450--Sobic010G090100 Sobic006G130600 Sobic006G130600 Sobic004G029450--Sobic006G130600 Sobic004G029450--Sobic008G170500 Sobic004G029450--Sobic003G300900 Sobic004G029450--Sobic006G124200 Sobic004G029450--Sobic002G230900 Sobic002G091000--Sobic003G419400 Sobic002G091000--Sobic003G419300 Sobic002G091000--Sobic003G019400 Sobic002G091000--Sobic010G134900 Sobic002G091000--Sobic004G214300 Sobic001G542200 Sobic001G542200 Sobic002G091000--Sobic001G542200 Sobic010G027300 Sobic010G027300 Sobic002G091000--Sobic010G027300 Sobic002G091000--Sobic001G261400 Sobic002G091000--Sobic003G300900
Octagon: transcription factors


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