Gene annotation
Transcriptome id Sobic.004G112200.1
Synonym SMB, Sb04g009180, ANAC033
Functional annotation no apical meristem protein, putative, expressed
UniProt C5XZ54
Pfam PF02365
Panther DB PTHR31989 PTHR31989:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G79580 : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RAP-DB (Rice) LOC_Os02g15340.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a053477 , Zm00025a042359 , Zm00025a056131 , Zm00025a032141 , Zm00025a041401 , Zm00025a020964 , Zm00025a050329 , Zm00025a019940 , Zm00025a000360 , Zm00025a050155 , Zm00025a040250 , Zm00025a050926 , Zm00025a011264
Brachypodium KQJ94869 , KQJ94263 , KQJ94262 , KQK19730 , KQK10307 , PNT78278 , PNT76724 , KQK20059 , KQJ82828 , KQK23882 , PNT76596
Barley HORVU3Hr1G080100.4 , HORVU3Hr1G080100.5 , HORVU3Hr1G080100.6 , HORVU3Hr1G080100.7 , HORVU3Hr1G080100.3 , HORVU7Hr1G075550.2 , HORVU7Hr1G075550.1 , HORVU7Hr1G075550.7 , HORVU7Hr1G075550.6 , HORVU7Hr1G075550.5 , HORVU3Hr1G094170.1 , HORVU4Hr1G083050.2 , HORVU4Hr1G083050.3 , HORVU4Hr1G083050.4 , HORVU4Hr1G083050.5 , HORVU4Hr1G083050.6 , HORVU4Hr1G083050.7 , HORVU4Hr1G083050.8 , HORVU4Hr1G083050.9 , HORVU4Hr1G083050.12 , HORVU4Hr1G083050.10 , HORVU4Hr1G083050.11 , HORVU4Hr1G083050.15 , HORVU2Hr1G092030.10 , HORVU2Hr1G092030.11 , HORVU7Hr1G012780.7 , HORVU7Hr1G012780.1 , HORVU2Hr1G004130.1 , HORVU2Hr1G092030.14 , HORVU2Hr1G092030.15 , HORVU2Hr1G092030.16 , HORVU2Hr1G092030.17 , HORVU7Hr1G012780.9 , HORVU7Hr1G012780.8 , HORVU2Hr1G092030.12 , HORVU2Hr1G092030.13 , HORVU7Hr1G012780.5 , HORVU7Hr1G012780.4 , HORVU7Hr1G012780.6 , HORVU2Hr1G092030.18 , HORVU2Hr1G092030.19 , HORVU7Hr1G012780.3 , HORVU7Hr1G012780.2 , HORVU2Hr1G092030.8 , HORVU2Hr1G092030.9 , HORVU2Hr1G092030.6 , HORVU2Hr1G092030.7 , HORVU2Hr1G092030.4 , HORVU2Hr1G092030.5 , HORVU2Hr1G092030.2 , HORVU2Hr1G092030.3 , HORVU2Hr1G092030.1 , HORVU5Hr1G045650.8 , HORVU5Hr1G045650.4 , HORVU5Hr1G045650.7 , HORVU5Hr1G045650.1 , HORVU5Hr1G045650.3 , HORVU4Hr1G083050.13 , HORVU4Hr1G083050.14 , HORVU4Hr1G089660.1
Wheat TraesCS2B02G328300 , TraesCS3B02G371200 , TraesCS7D02G062100 , TraesCS3D02G333100 , TraesCS7D02G063300 , TraesCS2A02G311500 , TraesCS5A02G143200 , TraesCS4A02G421200 , TraesCS7A02G068300 , TraesCS7A02G317100 , TraesCS7A02G317100 , TraesCS4A02G419900 , TraesCS3A02G339600 , TraesCS3A02G339600 , TraesCS5D02G148800 , TraesCS7D02G062600 , TraesCS4B02G320300 , TraesCS7D02G314000 , TraesCS7D02G314000 , TraesCS5B02G356000 , TraesCS4A02G421100 , TraesCS4A02G420900 , TraesCS4D02G316800 , TraesCS2D02G309800 , TraesCS7B02G233300 , TraesCS7D02G329200 , TraesCS2B02G403300 , TraesCS7A02G349500 , TraesCS2D02G382800 , TraesCS7D02G062300 , TraesCS2A02G386300 , TraesCS5B02G142100
Populus PNT17164


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G058600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
2 Sobic.003G324600 transcription factor-related, putative, expressed -
3 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
4 Sobic.003G419300 xylanase inhibitor, putative, expressed -
5 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
6 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.001G307600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
8 Sobic.010G155100 NAC domain containing protein, putative, expressed -
9 Sobic.008G077900 exostosin family domain containing protein, expressed -
10 Sobic.003G226800 Relatively abundant in the susceptible sorghum under stress(PubMedID : 26645959)@RHsf 13/Put. Hsf 1(PubMedID : 27006630)@down-regulated TF in developmental senescence(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
11 Sobic.010G134900 DNA binding protein, putative, expressed -
12 Sobic.002G374650 -(PubMedID : 26976818) K11517: (S)-2-hydroxy-acid oxidase
13 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
14 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
15 Sobic.006G205500 glycosyl hydrolases family 16, putative, expressed -
16 Sobic.001G542200 expansin precursor, putative, expressed -
17 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G542000 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.006G201000 WRKY37, expressed -
20 Sobic.004G258900 - -


Gene co-expression network
sample Sobic004G112200 Sobic004G112200 Sobic009G058600 Sobic009G058600 Sobic004G112200--Sobic009G058600 Sobic003G324600 Sobic003G324600 Sobic004G112200--Sobic003G324600 Sobic002G239700 Sobic002G239700 Sobic004G112200--Sobic002G239700 Sobic003G419300 Sobic003G419300 Sobic004G112200--Sobic003G419300 Sobic004G214300 Sobic004G214300 Sobic004G112200--Sobic004G214300 Sobic001G232000 Sobic001G232000 Sobic004G112200--Sobic001G232000 Sobic001G307600 Sobic001G307600 Sobic004G112200--Sobic001G307600 Sobic010G155100 Sobic010G155100 Sobic004G112200--Sobic010G155100 Sobic008G077900 Sobic008G077900 Sobic004G112200--Sobic008G077900 Sobic009G058600--Sobic004G112200 Sobic009G058600--Sobic003G419300 Sobic009G058600--Sobic001G232000 Sobic004G323300 Sobic004G323300 Sobic009G058600--Sobic004G323300 Sobic009G058600--Sobic003G324600 Sobic001G542000 Sobic001G542000 Sobic009G058600--Sobic001G542000 Sobic008G035800 Sobic008G035800 Sobic009G058600--Sobic008G035800 Sobic001G542200 Sobic001G542200 Sobic009G058600--Sobic001G542200 Sobic002G343100 Sobic002G343100 Sobic009G058600--Sobic002G343100 Sobic003G324600--Sobic004G112200 Sobic003G324600--Sobic003G419300 Sobic003G324600--Sobic002G239700 Sobic003G324600--Sobic009G058600 Sobic003G324600--Sobic008G035800 Sobic006G201000 Sobic006G201000 Sobic003G324600--Sobic006G201000 Sobic003G324600--Sobic001G232000 Sobic003G324600--Sobic001G307600 Sobic003G324600--Sobic004G214300 Sobic002G239700--Sobic008G077900 Sobic005G222600 Sobic005G222600 Sobic002G239700--Sobic005G222600 Sobic006G205500 Sobic006G205500 Sobic002G239700--Sobic006G205500 Sobic002G239700--Sobic001G232000 Sobic005G071700 Sobic005G071700 Sobic002G239700--Sobic005G071700 Sobic002G239700--Sobic003G419300 Sobic003G001300 Sobic003G001300 Sobic002G239700--Sobic003G001300 Sobic003G419400 Sobic003G419400 Sobic002G239700--Sobic003G419400 Sobic009G060700 Sobic009G060700 Sobic002G239700--Sobic009G060700 Sobic003G419300--Sobic001G232000 Sobic003G419300--Sobic003G419400 Sobic003G419300--Sobic008G035800 Sobic003G419300--Sobic009G058600 Sobic003G419300--Sobic002G239700 Sobic003G419300--Sobic004G214300 Sobic003G419300--Sobic003G324600 Sobic003G419300--Sobic004G112200 Sobic009G208700 Sobic009G208700 Sobic003G419300--Sobic009G208700 Sobic009G102400 Sobic009G102400 Sobic004G214300--Sobic009G102400 Sobic006G124200 Sobic006G124200 Sobic004G214300--Sobic006G124200 Sobic004G214300--Sobic010G155100 Sobic010G134900 Sobic010G134900 Sobic004G214300--Sobic010G134900 Sobic001G261400 Sobic001G261400 Sobic004G214300--Sobic001G261400 Sobic004G214300--Sobic003G419300 Sobic003G019400 Sobic003G019400 Sobic004G214300--Sobic003G019400 Sobic004G214300--Sobic002G239700 Sobic004G214300--Sobic004G112200 Sobic002G003400 Sobic002G003400 Sobic001G232000--Sobic002G003400 Sobic001G232000--Sobic008G035800 Sobic001G232000--Sobic003G419300 Sobic007G090600 Sobic007G090600 Sobic001G232000--Sobic007G090600 Sobic003G282300 Sobic003G282300 Sobic001G232000--Sobic003G282300 Sobic001G232000--Sobic008G077900 Sobic002G118900 Sobic002G118900 Sobic001G232000--Sobic002G118900 Sobic001G263300 Sobic001G263300 Sobic001G232000--Sobic001G263300 Sobic001G232000--Sobic009G208700 Sobic001G307600--Sobic008G035800 Sobic004G271800 Sobic004G271800 Sobic001G307600--Sobic004G271800 Sobic004G312200 Sobic004G312200 Sobic001G307600--Sobic004G312200 Sobic010G082000 Sobic010G082000 Sobic001G307600--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G307600--Sobic004G322000 Sobic007G090472 Sobic007G090472 Sobic001G307600--Sobic007G090472 Sobic001G307600--Sobic001G232000 Sobic001G307600--Sobic006G201000 Sobic006G092700 Sobic006G092700 Sobic001G307600--Sobic006G092700 Sobic010G155100--Sobic004G214300 Sobic010G155100--Sobic009G102400 Sobic010G155100--Sobic004G112200 Sobic010G155100--Sobic001G261400 Sobic010G155100--Sobic010G134900 Sobic010G155100--Sobic006G205500 Sobic010G155100--Sobic002G239700 Sobic010G155100--Sobic006G124200 Sobic010G155100--Sobic003G019400 Sobic008G077900--Sobic003G001300 Sobic008G077900--Sobic005G222600 Sobic003G140200 Sobic003G140200 Sobic008G077900--Sobic003G140200 Sobic008G077900--Sobic004G322000 Sobic008G077900--Sobic002G239700 Sobic008G077900--Sobic009G060700 Sobic008G077900--Sobic006G205500 Sobic008G077900--Sobic007G090600 Sobic008G077900--Sobic005G071700
Octagon: transcription factors


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