Gene annotation
Transcriptome id Sobic.003G419300.2
Synonym Sb03g045260
Functional annotation xylanase inhibitor, putative, expressed
UniProt C5XHP7
Pfam PF14543 PF14541
Panther DB PTHR13683 PTHR13683:SF368
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G03220 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os01g71080.1 : xylanase inhibitor, putative, expressed
MaizeGDB (Corn) Zm00025a026094
Brachypodium KQK11432
Barley HORVU3Hr1G100400.2 , HORVU3Hr1G100400.3 , HORVU3Hr1G100400.1
Wheat TraesCS3D02G467800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
2 Sobic.003G419400 xylanase inhibitor, putative, expressed -
3 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
4 Sobic.009G058600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
5 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
7 Sobic.003G324600 transcription factor-related, putative, expressed -
8 Sobic.004G112200 no apical meristem protein, putative, expressed -
9 Sobic.009G208700 POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.008G077900 exostosin family domain containing protein, expressed -
11 Sobic.010G130500 SAM dependent carboxyl methyltransferase, putative, expressed -
12 Sobic.001G542200 expansin precursor, putative, expressed -
13 Sobic.003G019400 expressed protein -
14 Sobic.006G227500 - -
15 Sobic.002G343100 protein kinase, putative, expressed -
16 Sobic.004G323300 SCP-like extracellular protein, expressed -
17 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
19 Sobic.004G322000 hypro1, putative, expressed -
20 Sobic.003G226800 Relatively abundant in the susceptible sorghum under stress(PubMedID : 26645959)@RHsf 13/Put. Hsf 1(PubMedID : 27006630)@down-regulated TF in developmental senescence(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote


Gene co-expression network
sample Sobic003G419300 Sobic003G419300 Sobic001G232000 Sobic001G232000 Sobic003G419300--Sobic001G232000 Sobic003G419400 Sobic003G419400 Sobic003G419300--Sobic003G419400 Sobic008G035800 Sobic008G035800 Sobic003G419300--Sobic008G035800 Sobic009G058600 Sobic009G058600 Sobic003G419300--Sobic009G058600 Sobic002G239700 Sobic002G239700 Sobic003G419300--Sobic002G239700 Sobic004G214300 Sobic004G214300 Sobic003G419300--Sobic004G214300 Sobic003G324600 Sobic003G324600 Sobic003G419300--Sobic003G324600 Sobic004G112200 Sobic004G112200 Sobic003G419300--Sobic004G112200 Sobic009G208700 Sobic009G208700 Sobic003G419300--Sobic009G208700 Sobic002G003400 Sobic002G003400 Sobic001G232000--Sobic002G003400 Sobic001G232000--Sobic008G035800 Sobic001G232000--Sobic003G419300 Sobic007G090600 Sobic007G090600 Sobic001G232000--Sobic007G090600 Sobic003G282300 Sobic003G282300 Sobic001G232000--Sobic003G282300 Sobic008G077900 Sobic008G077900 Sobic001G232000--Sobic008G077900 Sobic002G118900 Sobic002G118900 Sobic001G232000--Sobic002G118900 Sobic001G263300 Sobic001G263300 Sobic001G232000--Sobic001G263300 Sobic001G232000--Sobic009G208700 Sobic003G419400--Sobic003G419300 Sobic003G419400--Sobic001G232000 Sobic003G419400--Sobic002G239700 Sobic002G076700 Sobic002G076700 Sobic003G419400--Sobic002G076700 Sobic002G091000 Sobic002G091000 Sobic003G419400--Sobic002G091000 Sobic003G419400--Sobic009G208700 Sobic003G419400--Sobic004G214300 Sobic003G419400--Sobic008G077900 Sobic005G071700 Sobic005G071700 Sobic003G419400--Sobic005G071700 Sobic003G240400 Sobic003G240400 Sobic008G035800--Sobic003G240400 Sobic008G035800--Sobic003G282300 Sobic008G035800--Sobic007G090600 Sobic004G322000 Sobic004G322000 Sobic008G035800--Sobic004G322000 Sobic008G035800--Sobic009G208700 Sobic010G152400 Sobic010G152400 Sobic008G035800--Sobic010G152400 Sobic003G140200 Sobic003G140200 Sobic008G035800--Sobic003G140200 Sobic004G271800 Sobic004G271800 Sobic008G035800--Sobic004G271800 Sobic010G082000 Sobic010G082000 Sobic008G035800--Sobic010G082000 Sobic009G058600--Sobic004G112200 Sobic009G058600--Sobic003G419300 Sobic009G058600--Sobic001G232000 Sobic004G323300 Sobic004G323300 Sobic009G058600--Sobic004G323300 Sobic009G058600--Sobic003G324600 Sobic001G542000 Sobic001G542000 Sobic009G058600--Sobic001G542000 Sobic009G058600--Sobic008G035800 Sobic001G542200 Sobic001G542200 Sobic009G058600--Sobic001G542200 Sobic002G343100 Sobic002G343100 Sobic009G058600--Sobic002G343100 Sobic002G239700--Sobic008G077900 Sobic005G222600 Sobic005G222600 Sobic002G239700--Sobic005G222600 Sobic006G205500 Sobic006G205500 Sobic002G239700--Sobic006G205500 Sobic002G239700--Sobic001G232000 Sobic002G239700--Sobic005G071700 Sobic002G239700--Sobic003G419300 Sobic003G001300 Sobic003G001300 Sobic002G239700--Sobic003G001300 Sobic002G239700--Sobic003G419400 Sobic009G060700 Sobic009G060700 Sobic002G239700--Sobic009G060700 Sobic009G102400 Sobic009G102400 Sobic004G214300--Sobic009G102400 Sobic006G124200 Sobic006G124200 Sobic004G214300--Sobic006G124200 Sobic010G155100 Sobic010G155100 Sobic004G214300--Sobic010G155100 Sobic010G134900 Sobic010G134900 Sobic004G214300--Sobic010G134900 Sobic001G261400 Sobic001G261400 Sobic004G214300--Sobic001G261400 Sobic004G214300--Sobic003G419300 Sobic003G019400 Sobic003G019400 Sobic004G214300--Sobic003G019400 Sobic004G214300--Sobic002G239700 Sobic004G214300--Sobic004G112200 Sobic003G324600--Sobic004G112200 Sobic003G324600--Sobic003G419300 Sobic003G324600--Sobic002G239700 Sobic003G324600--Sobic009G058600 Sobic003G324600--Sobic008G035800 Sobic006G201000 Sobic006G201000 Sobic003G324600--Sobic006G201000 Sobic003G324600--Sobic001G232000 Sobic001G307600 Sobic001G307600 Sobic003G324600--Sobic001G307600 Sobic003G324600--Sobic004G214300 Sobic004G112200--Sobic009G058600 Sobic004G112200--Sobic003G324600 Sobic004G112200--Sobic002G239700 Sobic004G112200--Sobic003G419300 Sobic004G112200--Sobic004G214300 Sobic004G112200--Sobic001G232000 Sobic004G112200--Sobic001G307600 Sobic004G112200--Sobic010G155100 Sobic004G112200--Sobic008G077900 Sobic009G208700--Sobic002G343100 Sobic009G208700--Sobic003G282300 Sobic009G208700--Sobic008G035800 Sobic009G208700--Sobic007G090600 Sobic009G208700--Sobic004G322000 Sobic009G181600 Sobic009G181600 Sobic009G208700--Sobic009G181600 Sobic010G130500 Sobic010G130500 Sobic009G208700--Sobic010G130500 Sobic006G085700 Sobic006G085700 Sobic009G208700--Sobic006G085700 Sobic009G208700--Sobic003G240400
Octagon: transcription factors


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