Gene annotation
Transcriptome id Sobic.009G058600.2
Synonym lateral organ boundaries, ASL11, SbLBD29, Sb09g004940, LBD15
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt A0A1Z5R139
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30340 : LOB domain-containing protein 13
RAP-DB (Rice) LOC_Os05g07270.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a036898 , Zm00025a027034 , Zm00025a043472
Brachypodium KQK13888 , KQK10377 , PNT71725 , KQK07317
Barley HORVU3Hr1G088440.9 , HORVU3Hr1G088440.8 , HORVU3Hr1G088440.1 , HORVU3Hr1G088440.3 , HORVU3Hr1G088440.2 , HORVU3Hr1G088440.5 , HORVU3Hr1G088440.4 , HORVU3Hr1G088440.7 , HORVU3Hr1G088440.6 , HORVU1Hr1G024490.2 , HORVU1Hr1G024490.1 , HORVU3Hr1G088440.10
Wheat TraesCS1D02G113100 , TraesCS1B02G235700 , TraesCS1D02G224000 , TraesCS1B02G131900 , TraesCS1B02G131900 , TraesCS3A02G346300 , TraesCS3B02G378100 , TraesCS3D02G340000 , TraesCS1A02G111700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G112200 no apical meristem protein, putative, expressed -
2 Sobic.003G419300 xylanase inhibitor, putative, expressed -
3 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.004G323300 SCP-like extracellular protein, expressed -
5 Sobic.003G324600 transcription factor-related, putative, expressed -
6 Sobic.001G542000 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
8 Sobic.001G542200 expansin precursor, putative, expressed -
9 Sobic.002G343100 protein kinase, putative, expressed -
10 Sobic.006G227500 - -
11 Sobic.006G201000 WRKY37, expressed -
12 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
13 Sobic.009G208700 POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.009G058400 expressed protein -
16 Sobic.001G307600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
17 Sobic.004G110700 DNA binding protein, putative, expressed -
18 Sobic.003G419400 xylanase inhibitor, putative, expressed -
19 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
20 Sobic.004G322100 hypro1, putative, expressed -


Gene co-expression network
sample Sobic009G058600 Sobic009G058600 Sobic004G112200 Sobic004G112200 Sobic009G058600--Sobic004G112200 Sobic003G419300 Sobic003G419300 Sobic009G058600--Sobic003G419300 Sobic001G232000 Sobic001G232000 Sobic009G058600--Sobic001G232000 Sobic004G323300 Sobic004G323300 Sobic009G058600--Sobic004G323300 Sobic003G324600 Sobic003G324600 Sobic009G058600--Sobic003G324600 Sobic001G542000 Sobic001G542000 Sobic009G058600--Sobic001G542000 Sobic008G035800 Sobic008G035800 Sobic009G058600--Sobic008G035800 Sobic001G542200 Sobic001G542200 Sobic009G058600--Sobic001G542200 Sobic002G343100 Sobic002G343100 Sobic009G058600--Sobic002G343100 Sobic004G112200--Sobic009G058600 Sobic004G112200--Sobic003G324600 Sobic002G239700 Sobic002G239700 Sobic004G112200--Sobic002G239700 Sobic004G112200--Sobic003G419300 Sobic004G214300 Sobic004G214300 Sobic004G112200--Sobic004G214300 Sobic004G112200--Sobic001G232000 Sobic001G307600 Sobic001G307600 Sobic004G112200--Sobic001G307600 Sobic010G155100 Sobic010G155100 Sobic004G112200--Sobic010G155100 Sobic008G077900 Sobic008G077900 Sobic004G112200--Sobic008G077900 Sobic003G419300--Sobic001G232000 Sobic003G419400 Sobic003G419400 Sobic003G419300--Sobic003G419400 Sobic003G419300--Sobic008G035800 Sobic003G419300--Sobic009G058600 Sobic003G419300--Sobic002G239700 Sobic003G419300--Sobic004G214300 Sobic003G419300--Sobic003G324600 Sobic003G419300--Sobic004G112200 Sobic009G208700 Sobic009G208700 Sobic003G419300--Sobic009G208700 Sobic002G003400 Sobic002G003400 Sobic001G232000--Sobic002G003400 Sobic001G232000--Sobic008G035800 Sobic001G232000--Sobic003G419300 Sobic007G090600 Sobic007G090600 Sobic001G232000--Sobic007G090600 Sobic003G282300 Sobic003G282300 Sobic001G232000--Sobic003G282300 Sobic001G232000--Sobic008G077900 Sobic002G118900 Sobic002G118900 Sobic001G232000--Sobic002G118900 Sobic001G263300 Sobic001G263300 Sobic001G232000--Sobic001G263300 Sobic001G232000--Sobic009G208700 Sobic004G322100 Sobic004G322100 Sobic004G323300--Sobic004G322100 Sobic001G238200 Sobic001G238200 Sobic004G323300--Sobic001G238200 Sobic003G064800 Sobic003G064800 Sobic004G323300--Sobic003G064800 Sobic003G140700 Sobic003G140700 Sobic004G323300--Sobic003G140700 Sobic006G227500 Sobic006G227500 Sobic004G323300--Sobic006G227500 Sobic004G306900 Sobic004G306900 Sobic004G323300--Sobic004G306900 Sobic007G050200 Sobic007G050200 Sobic004G323300--Sobic007G050200 Sobic001G229000 Sobic001G229000 Sobic004G323300--Sobic001G229000 Sobic007G086300 Sobic007G086300 Sobic004G323300--Sobic007G086300 Sobic003G324600--Sobic004G112200 Sobic003G324600--Sobic003G419300 Sobic003G324600--Sobic002G239700 Sobic003G324600--Sobic009G058600 Sobic003G324600--Sobic008G035800 Sobic006G201000 Sobic006G201000 Sobic003G324600--Sobic006G201000 Sobic003G324600--Sobic001G232000 Sobic003G324600--Sobic001G307600 Sobic003G324600--Sobic004G214300 Sobic003G349400 Sobic003G349400 Sobic001G542000--Sobic003G349400 Sobic002G068000 Sobic002G068000 Sobic001G542000--Sobic002G068000 Sobic003G059000 Sobic003G059000 Sobic001G542000--Sobic003G059000 Sobic006G150100 Sobic006G150100 Sobic001G542000--Sobic006G150100 Sobic003G185300 Sobic003G185300 Sobic001G542000--Sobic003G185300 Sobic005G127400 Sobic005G127400 Sobic001G542000--Sobic005G127400 Sobic001G542000--Sobic004G323300 Sobic001G237800 Sobic001G237800 Sobic001G542000--Sobic001G237800 Sobic004G110700 Sobic004G110700 Sobic001G542000--Sobic004G110700 Sobic003G240400 Sobic003G240400 Sobic008G035800--Sobic003G240400 Sobic008G035800--Sobic003G282300 Sobic008G035800--Sobic007G090600 Sobic004G322000 Sobic004G322000 Sobic008G035800--Sobic004G322000 Sobic008G035800--Sobic009G208700 Sobic010G152400 Sobic010G152400 Sobic008G035800--Sobic010G152400 Sobic003G140200 Sobic003G140200 Sobic008G035800--Sobic003G140200 Sobic004G271800 Sobic004G271800 Sobic008G035800--Sobic004G271800 Sobic010G082000 Sobic010G082000 Sobic008G035800--Sobic010G082000 Sobic001G542200--Sobic003G419300 Sobic001G542200--Sobic009G058600 Sobic001G542200--Sobic006G227500 Sobic001G542200--Sobic001G232000 Sobic001G542200--Sobic004G323300 Sobic001G542200--Sobic003G419400 Sobic010G134900 Sobic010G134900 Sobic001G542200--Sobic010G134900 Sobic001G542200--Sobic004G112200 Sobic001G542200--Sobic003G324600 Sobic009G181600 Sobic009G181600 Sobic002G343100--Sobic009G181600 Sobic002G343100--Sobic009G208700 Sobic002G343100--Sobic003G282300 Sobic002G343100--Sobic007G090600 Sobic010G130500 Sobic010G130500 Sobic002G343100--Sobic010G130500 Sobic006G092700 Sobic006G092700 Sobic002G343100--Sobic006G092700 Sobic002G343100--Sobic004G322000 Sobic002G343100--Sobic008G035800 Sobic002G343100--Sobic007G086300
Octagon: transcription factors


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