Gene annotation
Transcriptome id Sobic.010G130500.2,Sobic.010G130500.1,Sobic.010G130500.3
Synonym Sb10g011850, NAMT1
Functional annotation SAM dependent carboxyl methyltransferase, putative, expressed
UniProt A0A194YJW2 , C5Z1L6
Pfam PF03492
Panther DB PTHR31009 PTHR31009:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G04370 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g20920.1 : SAM dependent carboxyl methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.006G133400 - -
3 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
4 Sobic.002G343100 protein kinase, putative, expressed -
5 Sobic.009G208700 POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
7 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
9 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
10 Sobic.010G031700 thaumatin, putative, expressed -
11 Sobic.002G118801 - -
12 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
13 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
14 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
15 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
16 Sobic.005G097400 cell death associated protein, putative, expressed -
17 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
18 Sobic.001G539200 expressed protein -
19 Sobic.004G323300 SCP-like extracellular protein, expressed -
20 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G130500 Sobic010G130500 Sobic003G282300 Sobic003G282300 Sobic010G130500--Sobic003G282300 Sobic006G133400 Sobic006G133400 Sobic010G130500--Sobic006G133400 Sobic007G086300 Sobic007G086300 Sobic010G130500--Sobic007G086300 Sobic002G343100 Sobic002G343100 Sobic010G130500--Sobic002G343100 Sobic009G208700 Sobic009G208700 Sobic010G130500--Sobic009G208700 Sobic008G035800 Sobic008G035800 Sobic010G130500--Sobic008G035800 Sobic004G106100 Sobic004G106100 Sobic010G130500--Sobic004G106100 Sobic003G095100 Sobic003G095100 Sobic010G130500--Sobic003G095100 Sobic004G029400 Sobic004G029400 Sobic010G130500--Sobic004G029400 Sobic007G090600 Sobic007G090600 Sobic003G282300--Sobic007G090600 Sobic006G085700 Sobic006G085700 Sobic003G282300--Sobic006G085700 Sobic003G140200 Sobic003G140200 Sobic003G282300--Sobic003G140200 Sobic003G282300--Sobic004G106100 Sobic003G282300--Sobic008G035800 Sobic006G205700 Sobic006G205700 Sobic003G282300--Sobic006G205700 Sobic006G031100 Sobic006G031100 Sobic003G282300--Sobic006G031100 Sobic003G282300--Sobic003G095100 Sobic004G322000 Sobic004G322000 Sobic003G282300--Sobic004G322000 Sobic006G133400--Sobic010G130500 Sobic003G053200 Sobic003G053200 Sobic006G133400--Sobic003G053200 Sobic010G031700 Sobic010G031700 Sobic006G133400--Sobic010G031700 Sobic006G133400--Sobic003G282300 Sobic001G301000 Sobic001G301000 Sobic006G133400--Sobic001G301000 Sobic001G271300 Sobic001G271300 Sobic006G133400--Sobic001G271300 Sobic003G441700 Sobic003G441700 Sobic006G133400--Sobic003G441700 Sobic006G133400--Sobic009G208700 Sobic001G539200 Sobic001G539200 Sobic006G133400--Sobic001G539200 Sobic007G086300--Sobic004G106100 Sobic004G306900 Sobic004G306900 Sobic007G086300--Sobic004G306900 Sobic003G064800 Sobic003G064800 Sobic007G086300--Sobic003G064800 Sobic007G086300--Sobic006G205700 Sobic003G000100 Sobic003G000100 Sobic007G086300--Sobic003G000100 Sobic002G392100 Sobic002G392100 Sobic007G086300--Sobic002G392100 Sobic001G319300 Sobic001G319300 Sobic007G086300--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic007G086300--Sobic008G034900 Sobic003G319400 Sobic003G319400 Sobic007G086300--Sobic003G319400 Sobic009G181600 Sobic009G181600 Sobic002G343100--Sobic009G181600 Sobic002G343100--Sobic009G208700 Sobic002G343100--Sobic003G282300 Sobic002G343100--Sobic007G090600 Sobic002G343100--Sobic010G130500 Sobic006G092700 Sobic006G092700 Sobic002G343100--Sobic006G092700 Sobic002G343100--Sobic004G322000 Sobic002G343100--Sobic008G035800 Sobic002G343100--Sobic007G086300 Sobic009G208700--Sobic002G343100 Sobic009G208700--Sobic003G282300 Sobic009G208700--Sobic008G035800 Sobic009G208700--Sobic007G090600 Sobic009G208700--Sobic004G322000 Sobic009G208700--Sobic009G181600 Sobic009G208700--Sobic010G130500 Sobic009G208700--Sobic006G085700 Sobic003G240400 Sobic003G240400 Sobic009G208700--Sobic003G240400 Sobic008G035800--Sobic003G240400 Sobic008G035800--Sobic003G282300 Sobic008G035800--Sobic007G090600 Sobic008G035800--Sobic004G322000 Sobic008G035800--Sobic009G208700 Sobic010G152400 Sobic010G152400 Sobic008G035800--Sobic010G152400 Sobic008G035800--Sobic003G140200 Sobic004G271800 Sobic004G271800 Sobic008G035800--Sobic004G271800 Sobic010G082000 Sobic010G082000 Sobic008G035800--Sobic010G082000 Sobic004G106100--Sobic007G086300 Sobic004G106100--Sobic006G205700 Sobic004G106100--Sobic004G306900 Sobic004G106100--Sobic003G000100 Sobic004G106100--Sobic010G031700 Sobic004G106100--Sobic003G282300 Sobic002G391400 Sobic002G391400 Sobic004G106100--Sobic002G391400 Sobic002G233200 Sobic002G233200 Sobic004G106100--Sobic002G233200 Sobic004G106100--Sobic010G152400 Sobic003G095100--Sobic006G205700 Sobic003G441800 Sobic003G441800 Sobic003G095100--Sobic003G441800 Sobic008G020000 Sobic008G020000 Sobic003G095100--Sobic008G020000 Sobic003G167300 Sobic003G167300 Sobic003G095100--Sobic003G167300 Sobic003G095100--Sobic003G282300 Sobic003G441601 Sobic003G441601 Sobic003G095100--Sobic003G441601 Sobic003G095100--Sobic007G090600 Sobic003G095100--Sobic004G106100 Sobic005G046400 Sobic005G046400 Sobic003G095100--Sobic005G046400 Sobic004G029400--Sobic003G441800 Sobic004G029400--Sobic003G053200 Sobic004G029400--Sobic010G031700 Sobic004G121600 Sobic004G121600 Sobic004G029400--Sobic004G121600 Sobic007G037600 Sobic007G037600 Sobic004G029400--Sobic007G037600 Sobic004G029400--Sobic001G539200 Sobic004G029400--Sobic009G181600 Sobic004G029400--Sobic003G282300 Sobic005G119900 Sobic005G119900 Sobic004G029400--Sobic005G119900
Octagon: transcription factors


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