Gene annotation
Transcriptome id Sobic.004G214300.1
Synonym PLT2, Sb04g025960
Functional annotation AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed
UniProt A0A194YR45
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF8
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT1G51190 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g40070.1 : AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed
MaizeGDB (Corn) Zm00025a021173 , Zm00025a026413
Brachypodium PNT73386 , PNT61412 , PNT69056
Barley HORVU1Hr1G056500.15 , HORVU7Hr1G111060.6 , HORVU7Hr1G111060.7 , HORVU7Hr1G111060.4 , HORVU7Hr1G111060.8 , HORVU7Hr1G111060.9 , HORVU6Hr1G057060.8 , HORVU6Hr1G057060.6 , HORVU6Hr1G057060.7 , HORVU6Hr1G057060.4 , HORVU6Hr1G057060.5 , HORVU6Hr1G057060.2 , HORVU6Hr1G057060.3 , HORVU6Hr1G057060.1 , HORVU1Hr1G056500.33 , HORVU1Hr1G056500.31
Wheat TraesCS6B02G252000 , TraesCS2D02G357600 , TraesCS7D02G483200 , TraesCS7D02G483200 , TraesCS1D02G242800 , TraesCS2B02G378100 , TraesCS6D02G205300 , TraesCS6A02G229500 , TraesCS7B02G401400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
2 Sobic.006G124200 expressed protein -
3 Sobic.010G155100 NAC domain containing protein, putative, expressed -
4 Sobic.010G134900 DNA binding protein, putative, expressed -
5 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
6 Sobic.003G419300 xylanase inhibitor, putative, expressed -
7 Sobic.003G019400 expressed protein -
8 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
9 Sobic.004G112200 no apical meristem protein, putative, expressed -
10 Sobic.003G419400 xylanase inhibitor, putative, expressed -
11 Sobic.008G077900 exostosin family domain containing protein, expressed -
12 Sobic.010G177300 receptor-like protein kinase 2 precursor, putative, expressed -
13 Sobic.003G324600 transcription factor-related, putative, expressed -
14 Sobic.006G205500 glycosyl hydrolases family 16, putative, expressed -
15 Sobic.005G071700 expressed protein K13457: RPM1, disease resistance protein RPM1
16 Sobic.005G222600 RGH1A, putative, expressed K13457: RPM1, disease resistance protein RPM1
17 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.009G058600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
19 Sobic.003G395200 AML1, putative, expressed -
20 Sobic.003G226800 Relatively abundant in the susceptible sorghum under stress(PubMedID : 26645959)@RHsf 13/Put. Hsf 1(PubMedID : 27006630)@down-regulated TF in developmental senescence(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote


Gene co-expression network
sample Sobic004G214300 Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic004G214300--Sobic009G102400 Sobic006G124200 Sobic006G124200 Sobic004G214300--Sobic006G124200 Sobic010G155100 Sobic010G155100 Sobic004G214300--Sobic010G155100 Sobic010G134900 Sobic010G134900 Sobic004G214300--Sobic010G134900 Sobic001G261400 Sobic001G261400 Sobic004G214300--Sobic001G261400 Sobic003G419300 Sobic003G419300 Sobic004G214300--Sobic003G419300 Sobic003G019400 Sobic003G019400 Sobic004G214300--Sobic003G019400 Sobic002G239700 Sobic002G239700 Sobic004G214300--Sobic002G239700 Sobic004G112200 Sobic004G112200 Sobic004G214300--Sobic004G112200 Sobic009G102400--Sobic006G124200 Sobic009G102400--Sobic004G214300 Sobic009G102400--Sobic001G261400 Sobic009G102400--Sobic010G155100 Sobic009G102400--Sobic010G134900 Sobic010G177300 Sobic010G177300 Sobic009G102400--Sobic010G177300 Sobic006G013300 Sobic006G013300 Sobic009G102400--Sobic006G013300 Sobic005G105600 Sobic005G105600 Sobic009G102400--Sobic005G105600 Sobic009G102400--Sobic004G112200 Sobic006G124200--Sobic009G102400 Sobic006G124200--Sobic004G214300 Sobic006G124200--Sobic001G261400 Sobic006G124200--Sobic005G105600 Sobic006G124200--Sobic006G013300 Sobic006G124200--Sobic010G134900 Sobic006G124200--Sobic003G019400 Sobic006G124200--Sobic010G177300 Sobic003G395200 Sobic003G395200 Sobic006G124200--Sobic003G395200 Sobic010G155100--Sobic004G214300 Sobic010G155100--Sobic009G102400 Sobic010G155100--Sobic004G112200 Sobic010G155100--Sobic001G261400 Sobic010G155100--Sobic010G134900 Sobic006G205500 Sobic006G205500 Sobic010G155100--Sobic006G205500 Sobic010G155100--Sobic002G239700 Sobic010G155100--Sobic006G124200 Sobic010G155100--Sobic003G019400 Sobic010G134900--Sobic001G261400 Sobic010G134900--Sobic004G214300 Sobic010G134900--Sobic009G102400 Sobic010G134900--Sobic006G124200 Sobic010G134900--Sobic003G419300 Sobic010G134900--Sobic010G155100 Sobic010G134900--Sobic002G239700 Sobic010G134900--Sobic004G112200 Sobic003G419400 Sobic003G419400 Sobic010G134900--Sobic003G419400 Sobic001G261400--Sobic010G134900 Sobic001G261400--Sobic004G214300 Sobic001G261400--Sobic009G102400 Sobic004G263700 Sobic004G263700 Sobic001G261400--Sobic004G263700 Sobic002G230900 Sobic002G230900 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic002G218600 Sobic002G218600 Sobic001G261400--Sobic002G218600 Sobic001G261400--Sobic010G177300 Sobic001G261400--Sobic010G155100 Sobic001G232000 Sobic001G232000 Sobic003G419300--Sobic001G232000 Sobic003G419300--Sobic003G419400 Sobic008G035800 Sobic008G035800 Sobic003G419300--Sobic008G035800 Sobic009G058600 Sobic009G058600 Sobic003G419300--Sobic009G058600 Sobic003G419300--Sobic002G239700 Sobic003G419300--Sobic004G214300 Sobic003G324600 Sobic003G324600 Sobic003G419300--Sobic003G324600 Sobic003G419300--Sobic004G112200 Sobic009G208700 Sobic009G208700 Sobic003G419300--Sobic009G208700 Sobic003G019400--Sobic004G214300 Sobic003G019400--Sobic003G419300 Sobic010G090100 Sobic010G090100 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic003G019400--Sobic006G124200 Sobic003G019400--Sobic009G102400 Sobic004G029450 Sobic004G029450 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic008G077900 Sobic008G077900 Sobic002G239700--Sobic008G077900 Sobic005G222600 Sobic005G222600 Sobic002G239700--Sobic005G222600 Sobic002G239700--Sobic006G205500 Sobic002G239700--Sobic001G232000 Sobic005G071700 Sobic005G071700 Sobic002G239700--Sobic005G071700 Sobic002G239700--Sobic003G419300 Sobic003G001300 Sobic003G001300 Sobic002G239700--Sobic003G001300 Sobic002G239700--Sobic003G419400 Sobic009G060700 Sobic009G060700 Sobic002G239700--Sobic009G060700 Sobic004G112200--Sobic009G058600 Sobic004G112200--Sobic003G324600 Sobic004G112200--Sobic002G239700 Sobic004G112200--Sobic003G419300 Sobic004G112200--Sobic004G214300 Sobic004G112200--Sobic001G232000 Sobic001G307600 Sobic001G307600 Sobic004G112200--Sobic001G307600 Sobic004G112200--Sobic010G155100 Sobic004G112200--Sobic008G077900
Octagon: transcription factors


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