Gene annotation
Transcriptome id Sobic.006G124200.1
Synonym Sb06g020450
Functional annotation expressed protein
UniProt C5YAU7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g40640.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
2 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
4 Sobic.005G105600 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
5 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.010G134900 DNA binding protein, putative, expressed -
7 Sobic.003G019400 expressed protein -
8 Sobic.010G177300 receptor-like protein kinase 2 precursor, putative, expressed -
9 Sobic.003G395200 AML1, putative, expressed -
10 Sobic.010G155100 NAC domain containing protein, putative, expressed -
11 Sobic.004G264200 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.003G419300 xylanase inhibitor, putative, expressed -
14 Sobic.003G419400 xylanase inhibitor, putative, expressed -
15 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
16 Sobic.007G186600 resistance protein, putative, expressed -
17 Sobic.004G112200 no apical meristem protein, putative, expressed -
18 Sobic.002G076700 IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
19 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
20 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -


Gene co-expression network
sample Sobic006G124200 Sobic006G124200 Sobic009G102400 Sobic009G102400 Sobic006G124200--Sobic009G102400 Sobic004G214300 Sobic004G214300 Sobic006G124200--Sobic004G214300 Sobic001G261400 Sobic001G261400 Sobic006G124200--Sobic001G261400 Sobic005G105600 Sobic005G105600 Sobic006G124200--Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic006G124200--Sobic006G013300 Sobic010G134900 Sobic010G134900 Sobic006G124200--Sobic010G134900 Sobic003G019400 Sobic003G019400 Sobic006G124200--Sobic003G019400 Sobic010G177300 Sobic010G177300 Sobic006G124200--Sobic010G177300 Sobic003G395200 Sobic003G395200 Sobic006G124200--Sobic003G395200 Sobic009G102400--Sobic006G124200 Sobic009G102400--Sobic004G214300 Sobic009G102400--Sobic001G261400 Sobic010G155100 Sobic010G155100 Sobic009G102400--Sobic010G155100 Sobic009G102400--Sobic010G134900 Sobic009G102400--Sobic010G177300 Sobic009G102400--Sobic006G013300 Sobic009G102400--Sobic005G105600 Sobic004G112200 Sobic004G112200 Sobic009G102400--Sobic004G112200 Sobic004G214300--Sobic009G102400 Sobic004G214300--Sobic006G124200 Sobic004G214300--Sobic010G155100 Sobic004G214300--Sobic010G134900 Sobic004G214300--Sobic001G261400 Sobic003G419300 Sobic003G419300 Sobic004G214300--Sobic003G419300 Sobic004G214300--Sobic003G019400 Sobic002G239700 Sobic002G239700 Sobic004G214300--Sobic002G239700 Sobic004G214300--Sobic004G112200 Sobic001G261400--Sobic010G134900 Sobic001G261400--Sobic004G214300 Sobic001G261400--Sobic009G102400 Sobic004G263700 Sobic004G263700 Sobic001G261400--Sobic004G263700 Sobic002G230900 Sobic002G230900 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic002G218600 Sobic002G218600 Sobic001G261400--Sobic002G218600 Sobic001G261400--Sobic010G177300 Sobic001G261400--Sobic010G155100 Sobic005G105600--Sobic006G013300 Sobic009G208600 Sobic009G208600 Sobic005G105600--Sobic009G208600 Sobic004G029900 Sobic004G029900 Sobic005G105600--Sobic004G029900 Sobic002G232900 Sobic002G232900 Sobic005G105600--Sobic002G232900 Sobic004G347500 Sobic004G347500 Sobic005G105600--Sobic004G347500 Sobic003G419500 Sobic003G419500 Sobic005G105600--Sobic003G419500 Sobic005G021000 Sobic005G021000 Sobic005G105600--Sobic005G021000 Sobic005G105600--Sobic006G124200 Sobic001G508200 Sobic001G508200 Sobic005G105600--Sobic001G508200 Sobic006G013300--Sobic009G208600 Sobic006G013300--Sobic005G105600 Sobic006G013300--Sobic002G232900 Sobic006G013300--Sobic004G029900 Sobic006G013300--Sobic001G508200 Sobic006G013300--Sobic003G419500 Sobic006G013300--Sobic005G021000 Sobic006G013300--Sobic004G347500 Sobic002G240000 Sobic002G240000 Sobic006G013300--Sobic002G240000 Sobic010G134900--Sobic001G261400 Sobic010G134900--Sobic004G214300 Sobic010G134900--Sobic009G102400 Sobic010G134900--Sobic006G124200 Sobic010G134900--Sobic003G419300 Sobic010G134900--Sobic010G155100 Sobic010G134900--Sobic002G239700 Sobic010G134900--Sobic004G112200 Sobic003G419400 Sobic003G419400 Sobic010G134900--Sobic003G419400 Sobic003G019400--Sobic004G214300 Sobic003G019400--Sobic003G419300 Sobic010G090100 Sobic010G090100 Sobic003G019400--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic003G019400--Sobic001G197800 Sobic003G019400--Sobic001G261400 Sobic003G019400--Sobic006G124200 Sobic003G019400--Sobic009G102400 Sobic004G029450 Sobic004G029450 Sobic003G019400--Sobic004G029450 Sobic002G091000 Sobic002G091000 Sobic003G019400--Sobic002G091000 Sobic010G177300--Sobic001G261400 Sobic010G177300--Sobic009G102400 Sobic010G177300--Sobic004G214300 Sobic010G177300--Sobic006G124200 Sobic010G177300--Sobic010G134900 Sobic010G177300--Sobic002G218600 Sobic010G177300--Sobic010G155100 Sobic005G025900 Sobic005G025900 Sobic010G177300--Sobic005G025900 Sobic004G233700 Sobic004G233700 Sobic010G177300--Sobic004G233700 Sobic003G395200--Sobic006G124200 Sobic003G395200--Sobic009G102400 Sobic003G395200--Sobic004G214300 Sobic003G395200--Sobic001G261400 Sobic003G395200--Sobic003G019400 Sobic003G395200--Sobic010G134900 Sobic010G199500 Sobic010G199500 Sobic003G395200--Sobic010G199500 Sobic003G395200--Sobic004G029450 Sobic006G130600 Sobic006G130600 Sobic003G395200--Sobic006G130600
Octagon: transcription factors


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