Gene annotation
Transcriptome id Sobic.005G105600.1
Synonym
Functional annotation stripe rust resistance protein Yr10, putative, expressed
UniProt A0A1Z5RHP8
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF484
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G35450 : Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os02g19890.1 : stripe rust resistance protein Yr10, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -
2 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.004G029900 "transporter for metal ion into cytoplasm, an influx transporter for Al"(PubMedID : 28716414)@metal transporter Nramp6, putative, expressed -
4 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
5 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
6 Sobic.003G419500 xylanase inhibitor, putative, expressed -
7 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
8 Sobic.006G124200 expressed protein -
9 Sobic.001G508200 multidrug resistance-associated protein, putative, expressed -
10 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
11 Sobic.002G177600 expressed protein -
12 Sobic.003G281100 B3 DNA binding domain containing protein, expressed -
13 Sobic.001G254800 cytochrome P450, putative, expressed -
14 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.007G191500 - -
16 Sobic.001G298032 - -
17 Sobic.005G184000 - -
18 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
19 Sobic.002G394900 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.002G062100 exostosin family protein, putative, expressed -


Gene co-expression network
sample Sobic005G105600 Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic005G105600--Sobic006G013300 Sobic009G208600 Sobic009G208600 Sobic005G105600--Sobic009G208600 Sobic004G029900 Sobic004G029900 Sobic005G105600--Sobic004G029900 Sobic002G232900 Sobic002G232900 Sobic005G105600--Sobic002G232900 Sobic004G347500 Sobic004G347500 Sobic005G105600--Sobic004G347500 Sobic003G419500 Sobic003G419500 Sobic005G105600--Sobic003G419500 Sobic005G021000 Sobic005G021000 Sobic005G105600--Sobic005G021000 Sobic006G124200 Sobic006G124200 Sobic005G105600--Sobic006G124200 Sobic001G508200 Sobic001G508200 Sobic005G105600--Sobic001G508200 Sobic006G013300--Sobic009G208600 Sobic006G013300--Sobic005G105600 Sobic006G013300--Sobic002G232900 Sobic006G013300--Sobic004G029900 Sobic006G013300--Sobic001G508200 Sobic006G013300--Sobic003G419500 Sobic006G013300--Sobic005G021000 Sobic006G013300--Sobic004G347500 Sobic002G240000 Sobic002G240000 Sobic006G013300--Sobic002G240000 Sobic009G208600--Sobic006G013300 Sobic009G208600--Sobic005G105600 Sobic009G208600--Sobic002G232900 Sobic009G208600--Sobic003G419500 Sobic009G208600--Sobic004G029900 Sobic009G208600--Sobic005G021000 Sobic009G208600--Sobic004G347500 Sobic001G254800 Sobic001G254800 Sobic009G208600--Sobic001G254800 Sobic009G208600--Sobic002G240000 Sobic004G029900--Sobic009G208600 Sobic004G029900--Sobic005G105600 Sobic004G029900--Sobic006G013300 Sobic004G029900--Sobic002G232900 Sobic004G029900--Sobic003G419500 Sobic003G281100 Sobic003G281100 Sobic004G029900--Sobic003G281100 Sobic004G029900--Sobic005G021000 Sobic004G029900--Sobic001G254800 Sobic004G029900--Sobic002G240000 Sobic002G232900--Sobic009G208600 Sobic002G232900--Sobic006G013300 Sobic002G232900--Sobic005G021000 Sobic002G232900--Sobic001G254800 Sobic002G232900--Sobic003G419500 Sobic002G232900--Sobic004G347500 Sobic002G232900--Sobic004G029900 Sobic002G232900--Sobic002G240000 Sobic002G232900--Sobic005G105600 Sobic004G347500--Sobic005G021000 Sobic002G177600 Sobic002G177600 Sobic004G347500--Sobic002G177600 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic004G347500--Sobic002G232900 Sobic007G191500 Sobic007G191500 Sobic004G347500--Sobic007G191500 Sobic006G217800 Sobic006G217800 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic003G419500--Sobic009G208600 Sobic009G250500 Sobic009G250500 Sobic003G419500--Sobic009G250500 Sobic003G419500--Sobic002G232900 Sobic010G131500 Sobic010G131500 Sobic003G419500--Sobic010G131500 Sobic003G419500--Sobic005G021000 Sobic003G398200 Sobic003G398200 Sobic003G419500--Sobic003G398200 Sobic003G437400 Sobic003G437400 Sobic003G419500--Sobic003G437400 Sobic009G025500 Sobic009G025500 Sobic003G419500--Sobic009G025500 Sobic003G419500--Sobic006G013300 Sobic005G021000--Sobic001G254800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic007G025600 Sobic007G025600 Sobic005G021000--Sobic007G025600 Sobic008G149300 Sobic008G149300 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic005G021000--Sobic001G166900 Sobic009G102400 Sobic009G102400 Sobic006G124200--Sobic009G102400 Sobic004G214300 Sobic004G214300 Sobic006G124200--Sobic004G214300 Sobic001G261400 Sobic001G261400 Sobic006G124200--Sobic001G261400 Sobic006G124200--Sobic005G105600 Sobic006G124200--Sobic006G013300 Sobic010G134900 Sobic010G134900 Sobic006G124200--Sobic010G134900 Sobic003G019400 Sobic003G019400 Sobic006G124200--Sobic003G019400 Sobic010G177300 Sobic010G177300 Sobic006G124200--Sobic010G177300 Sobic003G395200 Sobic003G395200 Sobic006G124200--Sobic003G395200 Sobic001G508200--Sobic006G013300 Sobic001G508200--Sobic004G347500 Sobic001G508200--Sobic009G208600 Sobic001G508200--Sobic005G021000 Sobic006G208000 Sobic006G208000 Sobic001G508200--Sobic006G208000 Sobic002G266300 Sobic002G266300 Sobic001G508200--Sobic002G266300 Sobic010G024600 Sobic010G024600 Sobic001G508200--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic001G508200--Sobic003G098300 Sobic003G427300 Sobic003G427300 Sobic001G508200--Sobic003G427300
Octagon: transcription factors


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