Gene annotation
Transcriptome id Sobic.003G281100.1,Sobic.003G281100.2
Synonym Sb03g033260
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt C5XIE6 , A0A1W0VZA8
Pfam PF02362
Panther DB PTHR31391 PTHR31391:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G18990 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os01g52514.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK09536
Barley HORVU3Hr1G068580.8 , HORVU3Hr1G068580.9 , HORVU3Hr1G068580.6 , HORVU3Hr1G068580.7 , HORVU3Hr1G068580.4 , HORVU3Hr1G068580.5 , HORVU3Hr1G068580.2 , HORVU3Hr1G068580.3 , HORVU3Hr1G068580.1
Wheat TraesCS3A02G285800 , TraesCS3B02G320100 , TraesCS3D02G285600 , TraesCS3D02G285600 , TraesCS3D02G285600 , TraesCS3A02G285800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G029900 "transporter for metal ion into cytoplasm, an influx transporter for Al"(PubMedID : 28716414)@metal transporter Nramp6, putative, expressed -
2 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.005G105600 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
4 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -
5 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
6 Sobic.003G419500 xylanase inhibitor, putative, expressed -
7 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
8 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
9 Sobic.002G119200 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
11 Sobic.001G366300 telomerase reverse transcriptase, putative, expressed K11126: TERT, telomerase reverse transcriptase
12 Sobic.007G050900 - -
13 Sobic.001G254700 TPD1, putative, expressed -
14 Sobic.001G254800 cytochrome P450, putative, expressed -
15 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
16 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
17 Sobic.001G336200 "Grain Length3.2(Ortholog in rice:Adamski et al., 2009(PubMedID : 31659842)@cytochrome P450, putative, expressed -
18 Sobic.005G126701 - -
19 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
20 Sobic.006G247800 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G281100 Sobic003G281100 Sobic004G029900 Sobic004G029900 Sobic003G281100--Sobic004G029900 Sobic009G208600 Sobic009G208600 Sobic003G281100--Sobic009G208600 Sobic005G105600 Sobic005G105600 Sobic003G281100--Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic003G281100--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic003G281100--Sobic002G232900 Sobic003G419500 Sobic003G419500 Sobic003G281100--Sobic003G419500 Sobic002G240000 Sobic002G240000 Sobic003G281100--Sobic002G240000 Sobic005G021000 Sobic005G021000 Sobic003G281100--Sobic005G021000 Sobic002G119200 Sobic002G119200 Sobic003G281100--Sobic002G119200 Sobic004G029900--Sobic009G208600 Sobic004G029900--Sobic005G105600 Sobic004G029900--Sobic006G013300 Sobic004G029900--Sobic002G232900 Sobic004G029900--Sobic003G419500 Sobic004G029900--Sobic003G281100 Sobic004G029900--Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic004G029900--Sobic001G254800 Sobic004G029900--Sobic002G240000 Sobic009G208600--Sobic006G013300 Sobic009G208600--Sobic005G105600 Sobic009G208600--Sobic002G232900 Sobic009G208600--Sobic003G419500 Sobic009G208600--Sobic004G029900 Sobic009G208600--Sobic005G021000 Sobic004G347500 Sobic004G347500 Sobic009G208600--Sobic004G347500 Sobic009G208600--Sobic001G254800 Sobic009G208600--Sobic002G240000 Sobic005G105600--Sobic006G013300 Sobic005G105600--Sobic009G208600 Sobic005G105600--Sobic004G029900 Sobic005G105600--Sobic002G232900 Sobic005G105600--Sobic004G347500 Sobic005G105600--Sobic003G419500 Sobic005G105600--Sobic005G021000 Sobic006G124200 Sobic006G124200 Sobic005G105600--Sobic006G124200 Sobic001G508200 Sobic001G508200 Sobic005G105600--Sobic001G508200 Sobic006G013300--Sobic009G208600 Sobic006G013300--Sobic005G105600 Sobic006G013300--Sobic002G232900 Sobic006G013300--Sobic004G029900 Sobic006G013300--Sobic001G508200 Sobic006G013300--Sobic003G419500 Sobic006G013300--Sobic005G021000 Sobic006G013300--Sobic004G347500 Sobic006G013300--Sobic002G240000 Sobic002G232900--Sobic009G208600 Sobic002G232900--Sobic006G013300 Sobic002G232900--Sobic005G021000 Sobic002G232900--Sobic001G254800 Sobic002G232900--Sobic003G419500 Sobic002G232900--Sobic004G347500 Sobic002G232900--Sobic004G029900 Sobic002G232900--Sobic002G240000 Sobic002G232900--Sobic005G105600 Sobic003G419500--Sobic009G208600 Sobic009G250500 Sobic009G250500 Sobic003G419500--Sobic009G250500 Sobic003G419500--Sobic002G232900 Sobic010G131500 Sobic010G131500 Sobic003G419500--Sobic010G131500 Sobic003G419500--Sobic005G021000 Sobic003G398200 Sobic003G398200 Sobic003G419500--Sobic003G398200 Sobic003G437400 Sobic003G437400 Sobic003G419500--Sobic003G437400 Sobic009G025500 Sobic009G025500 Sobic003G419500--Sobic009G025500 Sobic003G419500--Sobic006G013300 Sobic002G240000--Sobic005G021000 Sobic002G240000--Sobic001G254800 Sobic001G534200 Sobic001G534200 Sobic002G240000--Sobic001G534200 Sobic008G149300 Sobic008G149300 Sobic002G240000--Sobic008G149300 Sobic009G246250 Sobic009G246250 Sobic002G240000--Sobic009G246250 Sobic006G083900 Sobic006G083900 Sobic002G240000--Sobic006G083900 Sobic010G053400 Sobic010G053400 Sobic002G240000--Sobic010G053400 Sobic007G025600 Sobic007G025600 Sobic002G240000--Sobic007G025600 Sobic004G349550 Sobic004G349550 Sobic002G240000--Sobic004G349550 Sobic005G021000--Sobic001G254800 Sobic006G217800 Sobic006G217800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic005G021000--Sobic007G025600 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic005G021000--Sobic001G166900 Sobic005G073700 Sobic005G073700 Sobic002G119200--Sobic005G073700 Sobic010G054800 Sobic010G054800 Sobic002G119200--Sobic010G054800 Sobic003G100000 Sobic003G100000 Sobic002G119200--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic002G119200--Sobic001G254700 Sobic006G047700 Sobic006G047700 Sobic002G119200--Sobic006G047700 Sobic007G050900 Sobic007G050900 Sobic002G119200--Sobic007G050900 Sobic001G366300 Sobic001G366300 Sobic002G119200--Sobic001G366300 Sobic002G119200--Sobic003G281100 Sobic002G244800 Sobic002G244800 Sobic002G119200--Sobic002G244800
Octagon: transcription factors


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