Gene annotation
Transcriptome id Sobic.002G119200.1
Synonym BPM1, Sb02g010170, ATBPM1
Functional annotation MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5X4Z7
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF178
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os06g45730.1 : MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) Zm00025a045767
Brachypodium KQK17056
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
2 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
4 Sobic.001G254700 TPD1, putative, expressed -
5 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
6 Sobic.007G050900 - -
7 Sobic.001G366300 telomerase reverse transcriptase, putative, expressed K11126: TERT, telomerase reverse transcriptase
8 Sobic.003G281100 B3 DNA binding domain containing protein, expressed -
9 Sobic.002G244800 - -
10 Sobic.004G254500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
11 Sobic.004G029900 "transporter for metal ion into cytoplasm, an influx transporter for Al"(PubMedID : 28716414)@metal transporter Nramp6, putative, expressed -
12 Sobic.001G463600 - -
13 Sobic.004G200700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
15 Sobic.009G031800 - -
16 Sobic.010G111450 - -
17 Sobic.010G195450 - -
18 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
19 Sobic.005G126701 - -
20 Sobic.009G250500 expressed protein -


Gene co-expression network
sample Sobic002G119200 Sobic002G119200 Sobic005G073700 Sobic005G073700 Sobic002G119200--Sobic005G073700 Sobic010G054800 Sobic010G054800 Sobic002G119200--Sobic010G054800 Sobic003G100000 Sobic003G100000 Sobic002G119200--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic002G119200--Sobic001G254700 Sobic006G047700 Sobic006G047700 Sobic002G119200--Sobic006G047700 Sobic007G050900 Sobic007G050900 Sobic002G119200--Sobic007G050900 Sobic001G366300 Sobic001G366300 Sobic002G119200--Sobic001G366300 Sobic003G281100 Sobic003G281100 Sobic002G119200--Sobic003G281100 Sobic002G244800 Sobic002G244800 Sobic002G119200--Sobic002G244800 Sobic005G073700--Sobic001G254700 Sobic005G073700--Sobic003G100000 Sobic005G073700--Sobic010G054800 Sobic005G073700--Sobic006G047700 Sobic005G073700--Sobic007G050900 Sobic005G073700--Sobic002G244800 Sobic004G200700 Sobic004G200700 Sobic005G073700--Sobic004G200700 Sobic009G250500 Sobic009G250500 Sobic005G073700--Sobic009G250500 Sobic004G254500 Sobic004G254500 Sobic005G073700--Sobic004G254500 Sobic010G054800--Sobic006G047700 Sobic010G054800--Sobic005G073700 Sobic010G054800--Sobic007G050900 Sobic010G195450 Sobic010G195450 Sobic010G054800--Sobic010G195450 Sobic010G054800--Sobic003G100000 Sobic010G054800--Sobic004G254500 Sobic010G054800--Sobic001G254700 Sobic010G054800--Sobic002G244800 Sobic010G054800--Sobic009G250500 Sobic003G100000--Sobic001G254700 Sobic003G100000--Sobic009G250500 Sobic003G100000--Sobic005G073700 Sobic003G398200 Sobic003G398200 Sobic003G100000--Sobic003G398200 Sobic003G100000--Sobic010G054800 Sobic010G131500 Sobic010G131500 Sobic003G100000--Sobic010G131500 Sobic007G025600 Sobic007G025600 Sobic003G100000--Sobic007G025600 Sobic001G254800 Sobic001G254800 Sobic003G100000--Sobic001G254800 Sobic003G100000--Sobic007G050900 Sobic001G254700--Sobic003G100000 Sobic001G254700--Sobic009G250500 Sobic001G254700--Sobic005G073700 Sobic001G254700--Sobic003G398200 Sobic001G254700--Sobic007G025600 Sobic001G254700--Sobic001G254800 Sobic009G103800 Sobic009G103800 Sobic001G254700--Sobic009G103800 Sobic001G254700--Sobic010G131500 Sobic002G184700 Sobic002G184700 Sobic001G254700--Sobic002G184700 Sobic002G197800 Sobic002G197800 Sobic006G047700--Sobic002G197800 Sobic006G047700--Sobic004G254500 Sobic006G047700--Sobic010G054800 Sobic006G047700--Sobic010G195450 Sobic006G047700--Sobic005G073700 Sobic006G047700--Sobic007G050900 Sobic006G047700--Sobic002G244800 Sobic006G047700--Sobic003G100000 Sobic006G047700--Sobic001G254700 Sobic007G050900--Sobic010G054800 Sobic007G050900--Sobic005G073700 Sobic007G050900--Sobic003G100000 Sobic007G050900--Sobic001G254700 Sobic007G050900--Sobic006G047700 Sobic009G031800 Sobic009G031800 Sobic007G050900--Sobic009G031800 Sobic007G050900--Sobic009G250500 Sobic003G419500 Sobic003G419500 Sobic007G050900--Sobic003G419500 Sobic002G010000 Sobic002G010000 Sobic007G050900--Sobic002G010000 Sobic001G463600 Sobic001G463600 Sobic001G366300--Sobic001G463600 Sobic002G394466 Sobic002G394466 Sobic001G366300--Sobic002G394466 Sobic002G240000 Sobic002G240000 Sobic001G366300--Sobic002G240000 Sobic002G040201 Sobic002G040201 Sobic001G366300--Sobic002G040201 Sobic001G136400 Sobic001G136400 Sobic001G366300--Sobic001G136400 Sobic002G055800 Sobic002G055800 Sobic001G366300--Sobic002G055800 Sobic008G018100 Sobic008G018100 Sobic001G366300--Sobic008G018100 Sobic009G012500 Sobic009G012500 Sobic001G366300--Sobic009G012500 Sobic008G149300 Sobic008G149300 Sobic001G366300--Sobic008G149300 Sobic004G029900 Sobic004G029900 Sobic003G281100--Sobic004G029900 Sobic009G208600 Sobic009G208600 Sobic003G281100--Sobic009G208600 Sobic005G105600 Sobic005G105600 Sobic003G281100--Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic003G281100--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic003G281100--Sobic002G232900 Sobic003G281100--Sobic003G419500 Sobic003G281100--Sobic002G240000 Sobic005G021000 Sobic005G021000 Sobic003G281100--Sobic005G021000 Sobic003G281100--Sobic002G119200 Sobic002G244800--Sobic006G047700 Sobic002G244800--Sobic005G073700 Sobic002G244800--Sobic010G054800 Sobic002G244800--Sobic003G100000 Sobic002G244800--Sobic001G254700 Sobic002G244800--Sobic004G254500 Sobic002G244800--Sobic007G050900 Sobic002G244800--Sobic010G195450 Sobic002G244800--Sobic002G197800
Octagon: transcription factors


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