Gene annotation
Transcriptome id Sobic.004G254500.1
Synonym Sb04g029350, Nuclear Factor Y, NF-YB6, SbNF-YB9, L1L
Functional annotation tentative name (PubMedID : 31536532)
histone-like transcription factor and archaeal histone, putative, expressed
UniProt A0A194YRJ0
Pfam PF00808
Panther DB PTHR11064 PTHR11064:SF20
NCBI CDD KOG0869; CCAAT-binding factor, subunit A (HAP3)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47670 : nuclear factor Y, subunit B6
RAP-DB (Rice) LOC_Os02g49370.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) Zm00025a050499 , Zm00025a032598 , Zm00025a021878
Brachypodium KQK01520 , KQK18584 , KQK18580
Barley HORVU6Hr1G072110.1 , HORVU7Hr1G043520.3 , HORVU7Hr1G043520.2 , HORVU7Hr1G043520.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
2 Sobic.002G197800 ZOS4-05 - C2H2 zinc finger protein, expressed -
3 Sobic.010G195450 - -
4 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
6 Sobic.007G050900 - -
7 Sobic.002G244800 - -
8 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
9 Sobic.001G254700 TPD1, putative, expressed -
10 Sobic.001G541400 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.002G119200 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.004G200700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.003G239500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase, putative, expressed -
14 Sobic.010G075800 - -
15 Sobic.009G250500 expressed protein -
16 Sobic.010G033500 expressed protein -
17 Sobic.004G286250 - -
18 Sobic.003G326200 LTPL35 - Protease inhibitor/seed storage/LTP family protein precursor, putative -
19 Sobic.005G036200 protein of unknown function containing protein, expressed -
20 Sobic.010G195400 dihydroflavonol-4-reductase, putative, expressed -


Gene co-expression network
sample Sobic004G254500 Sobic004G254500 Sobic006G047700 Sobic006G047700 Sobic004G254500--Sobic006G047700 Sobic002G197800 Sobic002G197800 Sobic004G254500--Sobic002G197800 Sobic010G195450 Sobic010G195450 Sobic004G254500--Sobic010G195450 Sobic010G054800 Sobic010G054800 Sobic004G254500--Sobic010G054800 Sobic005G073700 Sobic005G073700 Sobic004G254500--Sobic005G073700 Sobic007G050900 Sobic007G050900 Sobic004G254500--Sobic007G050900 Sobic002G244800 Sobic002G244800 Sobic004G254500--Sobic002G244800 Sobic003G100000 Sobic003G100000 Sobic004G254500--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic004G254500--Sobic001G254700 Sobic006G047700--Sobic002G197800 Sobic006G047700--Sobic004G254500 Sobic006G047700--Sobic010G054800 Sobic006G047700--Sobic010G195450 Sobic006G047700--Sobic005G073700 Sobic006G047700--Sobic007G050900 Sobic006G047700--Sobic002G244800 Sobic006G047700--Sobic003G100000 Sobic006G047700--Sobic001G254700 Sobic002G197800--Sobic006G047700 Sobic002G197800--Sobic010G195450 Sobic002G197800--Sobic004G254500 Sobic002G197800--Sobic010G054800 Sobic001G541400 Sobic001G541400 Sobic002G197800--Sobic001G541400 Sobic002G197800--Sobic005G073700 Sobic002G197800--Sobic002G244800 Sobic003G326200 Sobic003G326200 Sobic002G197800--Sobic003G326200 Sobic002G197800--Sobic007G050900 Sobic010G195450--Sobic006G047700 Sobic010G195450--Sobic002G197800 Sobic010G195450--Sobic004G254500 Sobic010G195450--Sobic010G054800 Sobic010G195450--Sobic005G073700 Sobic010G195450--Sobic007G050900 Sobic010G195450--Sobic001G541400 Sobic010G195450--Sobic002G244800 Sobic008G116100 Sobic008G116100 Sobic010G195450--Sobic008G116100 Sobic010G054800--Sobic006G047700 Sobic010G054800--Sobic005G073700 Sobic010G054800--Sobic007G050900 Sobic010G054800--Sobic010G195450 Sobic010G054800--Sobic003G100000 Sobic010G054800--Sobic004G254500 Sobic010G054800--Sobic001G254700 Sobic010G054800--Sobic002G244800 Sobic009G250500 Sobic009G250500 Sobic010G054800--Sobic009G250500 Sobic005G073700--Sobic001G254700 Sobic005G073700--Sobic003G100000 Sobic005G073700--Sobic010G054800 Sobic005G073700--Sobic006G047700 Sobic005G073700--Sobic007G050900 Sobic005G073700--Sobic002G244800 Sobic004G200700 Sobic004G200700 Sobic005G073700--Sobic004G200700 Sobic005G073700--Sobic009G250500 Sobic005G073700--Sobic004G254500 Sobic007G050900--Sobic010G054800 Sobic007G050900--Sobic005G073700 Sobic007G050900--Sobic003G100000 Sobic007G050900--Sobic001G254700 Sobic007G050900--Sobic006G047700 Sobic009G031800 Sobic009G031800 Sobic007G050900--Sobic009G031800 Sobic007G050900--Sobic009G250500 Sobic003G419500 Sobic003G419500 Sobic007G050900--Sobic003G419500 Sobic002G010000 Sobic002G010000 Sobic007G050900--Sobic002G010000 Sobic002G244800--Sobic006G047700 Sobic002G244800--Sobic005G073700 Sobic002G244800--Sobic010G054800 Sobic002G244800--Sobic003G100000 Sobic002G244800--Sobic001G254700 Sobic002G244800--Sobic004G254500 Sobic002G244800--Sobic007G050900 Sobic002G244800--Sobic010G195450 Sobic002G244800--Sobic002G197800 Sobic003G100000--Sobic001G254700 Sobic003G100000--Sobic009G250500 Sobic003G100000--Sobic005G073700 Sobic003G398200 Sobic003G398200 Sobic003G100000--Sobic003G398200 Sobic003G100000--Sobic010G054800 Sobic010G131500 Sobic010G131500 Sobic003G100000--Sobic010G131500 Sobic007G025600 Sobic007G025600 Sobic003G100000--Sobic007G025600 Sobic001G254800 Sobic001G254800 Sobic003G100000--Sobic001G254800 Sobic003G100000--Sobic007G050900 Sobic001G254700--Sobic003G100000 Sobic001G254700--Sobic009G250500 Sobic001G254700--Sobic005G073700 Sobic001G254700--Sobic003G398200 Sobic001G254700--Sobic007G025600 Sobic001G254700--Sobic001G254800 Sobic009G103800 Sobic009G103800 Sobic001G254700--Sobic009G103800 Sobic001G254700--Sobic010G131500 Sobic002G184700 Sobic002G184700 Sobic001G254700--Sobic002G184700
Octagon: transcription factors


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