Gene annotation
Transcriptome id Sobic.004G286250.3,Sobic.004G286250.1,Sobic.004G286250.2,Sobic.004G286250.4
Synonym -
Functional annotation -
UniProt A0A1Z5RPH8
Pfam -
Panther DB PTHR32463
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01220 : L-fucokinase/GDP-L-fucose pyrophosphorylase
RAP-DB (Rice) LOC_Os03g02410.1 : GHMP kinases ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a000210
Brachypodium KQK24012
Barley -
Wheat TraesCS4B02G360500 , TraesCS4B02G360500 , TraesCS5A02G528700 , TraesCS4D02G353600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050900 - -
2 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.010G195450 - -
4 Sobic.010G114100 nucleolar complex protein 2, putative, expressed -
5 Sobic.005G036200 protein of unknown function containing protein, expressed -
6 Sobic.010G112700 NHL repeat-containing protein, putative, expressed -
7 Sobic.005G139300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amidase, putative, expressed -
8 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
9 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
10 Sobic.005G120600 Highest expression level in embryo(PubMedID : 27501690)@OsSPL19 - SBP-box gene family member, expressed -
11 Sobic.005G018050 - -
12 Sobic.004G254500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
13 Sobic.002G420400 - -
14 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.008G118100 kelch repeat protein, putative, expressed -
16 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
17 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
18 Sobic.002G197800 ZOS4-05 - C2H2 zinc finger protein, expressed -
19 Sobic.002G119200 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase


Gene co-expression network
sample Sobic004G286250 Sobic004G286250 Sobic007G050900 Sobic007G050900 Sobic004G286250--Sobic007G050900 Sobic010G054800 Sobic010G054800 Sobic004G286250--Sobic010G054800 Sobic010G195450 Sobic010G195450 Sobic004G286250--Sobic010G195450 Sobic010G114100 Sobic010G114100 Sobic004G286250--Sobic010G114100 Sobic005G036200 Sobic005G036200 Sobic004G286250--Sobic005G036200 Sobic010G112700 Sobic010G112700 Sobic004G286250--Sobic010G112700 Sobic005G139300 Sobic005G139300 Sobic004G286250--Sobic005G139300 Sobic006G047700 Sobic006G047700 Sobic004G286250--Sobic006G047700 Sobic004G242200 Sobic004G242200 Sobic004G286250--Sobic004G242200 Sobic007G050900--Sobic010G054800 Sobic005G073700 Sobic005G073700 Sobic007G050900--Sobic005G073700 Sobic003G100000 Sobic003G100000 Sobic007G050900--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic007G050900--Sobic001G254700 Sobic007G050900--Sobic006G047700 Sobic009G031800 Sobic009G031800 Sobic007G050900--Sobic009G031800 Sobic009G250500 Sobic009G250500 Sobic007G050900--Sobic009G250500 Sobic003G419500 Sobic003G419500 Sobic007G050900--Sobic003G419500 Sobic002G010000 Sobic002G010000 Sobic007G050900--Sobic002G010000 Sobic010G054800--Sobic006G047700 Sobic010G054800--Sobic005G073700 Sobic010G054800--Sobic007G050900 Sobic010G054800--Sobic010G195450 Sobic010G054800--Sobic003G100000 Sobic004G254500 Sobic004G254500 Sobic010G054800--Sobic004G254500 Sobic010G054800--Sobic001G254700 Sobic002G244800 Sobic002G244800 Sobic010G054800--Sobic002G244800 Sobic010G054800--Sobic009G250500 Sobic010G195450--Sobic006G047700 Sobic002G197800 Sobic002G197800 Sobic010G195450--Sobic002G197800 Sobic010G195450--Sobic004G254500 Sobic010G195450--Sobic010G054800 Sobic010G195450--Sobic005G073700 Sobic010G195450--Sobic007G050900 Sobic001G541400 Sobic001G541400 Sobic010G195450--Sobic001G541400 Sobic010G195450--Sobic002G244800 Sobic008G116100 Sobic008G116100 Sobic010G195450--Sobic008G116100 Sobic010G114100--Sobic004G286250 Sobic002G416150 Sobic002G416150 Sobic010G114100--Sobic002G416150 Sobic010G114100--Sobic005G139300 Sobic005G120600 Sobic005G120600 Sobic010G114100--Sobic005G120600 Sobic004G126601 Sobic004G126601 Sobic010G114100--Sobic004G126601 Sobic003G368901 Sobic003G368901 Sobic010G114100--Sobic003G368901 Sobic002G119200 Sobic002G119200 Sobic010G114100--Sobic002G119200 Sobic010G114100--Sobic005G036200 Sobic004G065800 Sobic004G065800 Sobic010G114100--Sobic004G065800 Sobic007G192200 Sobic007G192200 Sobic005G036200--Sobic007G192200 Sobic002G420400 Sobic002G420400 Sobic005G036200--Sobic002G420400 Sobic009G002200 Sobic009G002200 Sobic005G036200--Sobic009G002200 Sobic001G375800 Sobic001G375800 Sobic005G036200--Sobic001G375800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic005G131800 Sobic005G131800 Sobic010G112700--Sobic005G131800 Sobic002G230400 Sobic002G230400 Sobic010G112700--Sobic002G230400 Sobic008G156200 Sobic008G156200 Sobic010G112700--Sobic008G156200 Sobic010G112700--Sobic001G541400 Sobic006G186300 Sobic006G186300 Sobic010G112700--Sobic006G186300 Sobic006G144500 Sobic006G144500 Sobic010G112700--Sobic006G144500 Sobic010G112700--Sobic008G116100 Sobic004G075700 Sobic004G075700 Sobic010G112700--Sobic004G075700 Sobic007G041200 Sobic007G041200 Sobic010G112700--Sobic007G041200 Sobic005G139300--Sobic007G050900 Sobic007G053100 Sobic007G053100 Sobic005G139300--Sobic007G053100 Sobic005G139300--Sobic003G419500 Sobic009G060600 Sobic009G060600 Sobic005G139300--Sobic009G060600 Sobic005G045700 Sobic005G045700 Sobic005G139300--Sobic005G045700 Sobic002G266300 Sobic002G266300 Sobic005G139300--Sobic002G266300 Sobic005G139300--Sobic009G250500 Sobic005G139300--Sobic002G010000 Sobic005G139300--Sobic005G036200 Sobic006G047700--Sobic002G197800 Sobic006G047700--Sobic004G254500 Sobic006G047700--Sobic010G054800 Sobic006G047700--Sobic010G195450 Sobic006G047700--Sobic005G073700 Sobic006G047700--Sobic007G050900 Sobic006G047700--Sobic002G244800 Sobic006G047700--Sobic003G100000 Sobic006G047700--Sobic001G254700 Sobic004G242200--Sobic002G420400 Sobic004G242200--Sobic001G456400 Sobic004G242200--Sobic005G036200 Sobic004G242200--Sobic009G002200 Sobic004G242200--Sobic001G375800 Sobic004G242200--Sobic007G192200 Sobic004G339900 Sobic004G339900 Sobic004G242200--Sobic004G339900 Sobic010G152000 Sobic010G152000 Sobic004G242200--Sobic010G152000 Sobic004G071050 Sobic004G071050 Sobic004G242200--Sobic004G071050
Octagon: transcription factors


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