Gene annotation
Transcriptome id Sobic.004G200700.1
Synonym Sb04g024690, ethylene response factor 47, ESR1, SbERF47, DRN
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5XWH6
Pfam PF00847
Panther DB PTHR31677 PTHR31677:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G12980 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g38090.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a031821 , Zm00025a055961 , Zm00025a049099 , Zm00025a008746
Brachypodium -
Barley HORVU4Hr1G013410.1 , HORVU6Hr1G053460.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
2 Sobic.001G254700 TPD1, putative, expressed -
3 Sobic.003G427000 early-responsive to dehydration protein-related, putative, expressed -
4 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
5 Sobic.009G241900 oleosin, putative, expressed -
6 Sobic.003G398200 B3 DNA binding domain containing protein, expressed -
7 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G266300 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed -
9 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.009G250500 expressed protein -
11 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.007G050900 - -
13 Sobic.007G025600 amino acid transporter, putative, expressed -
14 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
15 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
16 Sobic.001G254800 cytochrome P450, putative, expressed -
17 Sobic.010G211200 ZOS6-06 - C2H2 zinc finger protein, expressed -
18 Sobic.004G291200 - -
19 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
20 Sobic.001G393101 - -


Gene co-expression network
sample Sobic004G200700 Sobic004G200700 Sobic003G100000 Sobic003G100000 Sobic004G200700--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic004G200700--Sobic001G254700 Sobic003G427000 Sobic003G427000 Sobic004G200700--Sobic003G427000 Sobic005G073700 Sobic005G073700 Sobic004G200700--Sobic005G073700 Sobic009G241900 Sobic009G241900 Sobic004G200700--Sobic009G241900 Sobic003G398200 Sobic003G398200 Sobic004G200700--Sobic003G398200 Sobic010G054800 Sobic010G054800 Sobic004G200700--Sobic010G054800 Sobic002G266300 Sobic002G266300 Sobic004G200700--Sobic002G266300 Sobic009G012500 Sobic009G012500 Sobic004G200700--Sobic009G012500 Sobic003G100000--Sobic001G254700 Sobic009G250500 Sobic009G250500 Sobic003G100000--Sobic009G250500 Sobic003G100000--Sobic005G073700 Sobic003G100000--Sobic003G398200 Sobic003G100000--Sobic010G054800 Sobic010G131500 Sobic010G131500 Sobic003G100000--Sobic010G131500 Sobic007G025600 Sobic007G025600 Sobic003G100000--Sobic007G025600 Sobic001G254800 Sobic001G254800 Sobic003G100000--Sobic001G254800 Sobic007G050900 Sobic007G050900 Sobic003G100000--Sobic007G050900 Sobic001G254700--Sobic003G100000 Sobic001G254700--Sobic009G250500 Sobic001G254700--Sobic005G073700 Sobic001G254700--Sobic003G398200 Sobic001G254700--Sobic007G025600 Sobic001G254700--Sobic001G254800 Sobic009G103800 Sobic009G103800 Sobic001G254700--Sobic009G103800 Sobic001G254700--Sobic010G131500 Sobic002G184700 Sobic002G184700 Sobic001G254700--Sobic002G184700 Sobic003G427000--Sobic009G241900 Sobic008G191700 Sobic008G191700 Sobic003G427000--Sobic008G191700 Sobic010G211200 Sobic010G211200 Sobic003G427000--Sobic010G211200 Sobic001G393101 Sobic001G393101 Sobic003G427000--Sobic001G393101 Sobic006G217800 Sobic006G217800 Sobic003G427000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic003G427000--Sobic003G443400 Sobic002G394900 Sobic002G394900 Sobic003G427000--Sobic002G394900 Sobic003G427000--Sobic009G012500 Sobic004G222150 Sobic004G222150 Sobic003G427000--Sobic004G222150 Sobic005G073700--Sobic001G254700 Sobic005G073700--Sobic003G100000 Sobic005G073700--Sobic010G054800 Sobic006G047700 Sobic006G047700 Sobic005G073700--Sobic006G047700 Sobic005G073700--Sobic007G050900 Sobic002G244800 Sobic002G244800 Sobic005G073700--Sobic002G244800 Sobic005G073700--Sobic004G200700 Sobic005G073700--Sobic009G250500 Sobic004G254500 Sobic004G254500 Sobic005G073700--Sobic004G254500 Sobic009G241900--Sobic003G427000 Sobic009G241900--Sobic008G191700 Sobic009G241900--Sobic010G211200 Sobic005G206100 Sobic005G206100 Sobic009G241900--Sobic005G206100 Sobic009G241900--Sobic001G393101 Sobic005G212201 Sobic005G212201 Sobic009G241900--Sobic005G212201 Sobic009G241900--Sobic006G217800 Sobic009G241900--Sobic004G222150 Sobic005G078132 Sobic005G078132 Sobic009G241900--Sobic005G078132 Sobic003G398200--Sobic009G250500 Sobic003G398200--Sobic010G131500 Sobic006G248100 Sobic006G248100 Sobic003G398200--Sobic006G248100 Sobic001G058800 Sobic001G058800 Sobic003G398200--Sobic001G058800 Sobic003G437400 Sobic003G437400 Sobic003G398200--Sobic003G437400 Sobic001G208500 Sobic001G208500 Sobic003G398200--Sobic001G208500 Sobic003G051400 Sobic003G051400 Sobic003G398200--Sobic003G051400 Sobic003G372600 Sobic003G372600 Sobic003G398200--Sobic003G372600 Sobic010G198900 Sobic010G198900 Sobic003G398200--Sobic010G198900 Sobic010G054800--Sobic006G047700 Sobic010G054800--Sobic005G073700 Sobic010G054800--Sobic007G050900 Sobic010G195450 Sobic010G195450 Sobic010G054800--Sobic010G195450 Sobic010G054800--Sobic003G100000 Sobic010G054800--Sobic004G254500 Sobic010G054800--Sobic001G254700 Sobic010G054800--Sobic002G244800 Sobic010G054800--Sobic009G250500 Sobic002G266300--Sobic006G217800 Sobic005G021000 Sobic005G021000 Sobic002G266300--Sobic005G021000 Sobic001G534200 Sobic001G534200 Sobic002G266300--Sobic001G534200 Sobic002G266300--Sobic001G254800 Sobic001G125400 Sobic001G125400 Sobic002G266300--Sobic001G125400 Sobic009G025500 Sobic009G025500 Sobic002G266300--Sobic009G025500 Sobic007G053100 Sobic007G053100 Sobic002G266300--Sobic007G053100 Sobic002G266300--Sobic003G398200 Sobic006G208000 Sobic006G208000 Sobic002G266300--Sobic006G208000 Sobic009G012500--Sobic006G217800 Sobic006G083900 Sobic006G083900 Sobic009G012500--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic009G012500--Sobic007G008500 Sobic009G012500--Sobic001G393101 Sobic008G149300 Sobic008G149300 Sobic009G012500--Sobic008G149300 Sobic001G166900 Sobic001G166900 Sobic009G012500--Sobic001G166900 Sobic009G012500--Sobic003G443400 Sobic009G012500--Sobic001G534200 Sobic009G012500--Sobic007G025600
Octagon: transcription factors


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