Gene annotation
Transcriptome id Sobic.003G427000.1
Synonym Sb03g045900
Functional annotation early-responsive to dehydration protein-related, putative, expressed
UniProt C5XHW4
Pfam PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF30
NCBI CDD KOG1134; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G54510 : Early-responsive to dehydration stress protein (ERD4)
RAP-DB (Rice) LOC_Os01g72210.1 : early-responsive to dehydration protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a039135
Brachypodium KQK11555 , PNT73604
Barley HORVU3Hr1G107240.1
Wheat TraesCS3B02G541500 , TraesCS3B02G541500 , TraesCS3D02G485000 , TraesCS3D02G485000
Populus -


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cDNA sequences
Sobic.003G427000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G241900 oleosin, putative, expressed -
2 Sobic.008G191700 - -
3 Sobic.010G211200 ZOS6-06 - C2H2 zinc finger protein, expressed -
4 Sobic.001G393101 - -
5 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
7 Sobic.002G394900 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
9 Sobic.004G222150 - -
10 Sobic.005G078132 - -
11 Sobic.005G206100 cytochrome P450, putative, expressed -
12 Sobic.005G212201 - -
13 Sobic.003G398200 B3 DNA binding domain containing protein, expressed -
14 Sobic.003G285900 pathogen-related protein, putative, expressed -
15 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
16 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
17 Sobic.004G200700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.006G248100 lipase, putative, expressed -
19 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
20 Sobic.002G184700 expressed protein -


Gene co-expression network
sample Sobic003G427000 Sobic003G427000 Sobic009G241900 Sobic009G241900 Sobic003G427000--Sobic009G241900 Sobic008G191700 Sobic008G191700 Sobic003G427000--Sobic008G191700 Sobic010G211200 Sobic010G211200 Sobic003G427000--Sobic010G211200 Sobic001G393101 Sobic001G393101 Sobic003G427000--Sobic001G393101 Sobic006G217800 Sobic006G217800 Sobic003G427000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic003G427000--Sobic003G443400 Sobic002G394900 Sobic002G394900 Sobic003G427000--Sobic002G394900 Sobic009G012500 Sobic009G012500 Sobic003G427000--Sobic009G012500 Sobic004G222150 Sobic004G222150 Sobic003G427000--Sobic004G222150 Sobic009G241900--Sobic003G427000 Sobic009G241900--Sobic008G191700 Sobic009G241900--Sobic010G211200 Sobic005G206100 Sobic005G206100 Sobic009G241900--Sobic005G206100 Sobic009G241900--Sobic001G393101 Sobic005G212201 Sobic005G212201 Sobic009G241900--Sobic005G212201 Sobic009G241900--Sobic006G217800 Sobic009G241900--Sobic004G222150 Sobic005G078132 Sobic005G078132 Sobic009G241900--Sobic005G078132 Sobic008G191700--Sobic009G241900 Sobic002G064800 Sobic002G064800 Sobic008G191700--Sobic002G064800 Sobic008G191700--Sobic010G211200 Sobic008G191700--Sobic003G427000 Sobic008G191700--Sobic005G206100 Sobic008G191700--Sobic005G212201 Sobic008G191700--Sobic004G222150 Sobic004G276000 Sobic004G276000 Sobic008G191700--Sobic004G276000 Sobic003G275400 Sobic003G275400 Sobic008G191700--Sobic003G275400 Sobic010G211200--Sobic004G222150 Sobic010G211200--Sobic009G241900 Sobic010G211200--Sobic008G191700 Sobic010G211200--Sobic003G427000 Sobic010G211200--Sobic005G212201 Sobic010G211200--Sobic002G064800 Sobic010G211200--Sobic005G206100 Sobic003G285900 Sobic003G285900 Sobic010G211200--Sobic003G285900 Sobic010G211200--Sobic001G393101 Sobic001G393101--Sobic003G443400 Sobic001G393101--Sobic006G217800 Sobic005G184800 Sobic005G184800 Sobic001G393101--Sobic005G184800 Sobic008G149300 Sobic008G149300 Sobic001G393101--Sobic008G149300 Sobic001G122600 Sobic001G122600 Sobic001G393101--Sobic001G122600 Sobic006G217800--Sobic003G443400 Sobic006G217800--Sobic001G393101 Sobic001G166900 Sobic001G166900 Sobic006G217800--Sobic001G166900 Sobic006G167700 Sobic006G167700 Sobic006G217800--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic006G217800--Sobic002G184700 Sobic009G103800 Sobic009G103800 Sobic006G217800--Sobic009G103800 Sobic006G217800--Sobic008G149300 Sobic001G344300 Sobic001G344300 Sobic006G217800--Sobic001G344300 Sobic001G165600 Sobic001G165600 Sobic006G217800--Sobic001G165600 Sobic003G443400--Sobic006G217800 Sobic003G443400--Sobic001G393101 Sobic004G349550 Sobic004G349550 Sobic003G443400--Sobic004G349550 Sobic003G443400--Sobic008G149300 Sobic003G443400--Sobic009G103800 Sobic003G443400--Sobic006G167700 Sobic003G443400--Sobic001G166900 Sobic003G443400--Sobic001G344300 Sobic005G184700 Sobic005G184700 Sobic003G443400--Sobic005G184700 Sobic002G394900--Sobic001G393101 Sobic002G394900--Sobic003G443400 Sobic002G394900--Sobic006G217800 Sobic007G191500 Sobic007G191500 Sobic002G394900--Sobic007G191500 Sobic005G021000 Sobic005G021000 Sobic002G394900--Sobic005G021000 Sobic002G394900--Sobic003G427000 Sobic002G394900--Sobic008G149300 Sobic002G204350 Sobic002G204350 Sobic002G394900--Sobic002G204350 Sobic002G394900--Sobic001G122600 Sobic009G012500--Sobic006G217800 Sobic006G083900 Sobic006G083900 Sobic009G012500--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic009G012500--Sobic007G008500 Sobic009G012500--Sobic001G393101 Sobic009G012500--Sobic008G149300 Sobic009G012500--Sobic001G166900 Sobic009G012500--Sobic003G443400 Sobic001G534200 Sobic001G534200 Sobic009G012500--Sobic001G534200 Sobic007G025600 Sobic007G025600 Sobic009G012500--Sobic007G025600 Sobic004G222150--Sobic010G211200 Sobic004G123200 Sobic004G123200 Sobic004G222150--Sobic004G123200 Sobic004G222150--Sobic009G241900 Sobic004G222150--Sobic008G191700 Sobic004G222150--Sobic003G427000 Sobic004G222150--Sobic005G212201 Sobic004G222150--Sobic009G012500 Sobic008G141900 Sobic008G141900 Sobic004G222150--Sobic008G141900 Sobic004G222150--Sobic001G393101
Octagon: transcription factors


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