Gene annotation
Transcriptome id Sobic.003G239500.1
Synonym Sb03g029680
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
lipase, putative, expressed
UniProt C5XF83
Pfam PF01764
Panther DB PTHR31828 PTHR31828:SF8
NCBI CDD KOG4569; Predicted lipase
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G18550 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g46290.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a036671 , Zm00025a002564 , Zm00025a038689 , Zm00025a044654 , Zm00025a044655 , Zm00025a040923
Brachypodium PNT72507 , PNT72508 , KQJ98375 , KQK08985
Barley HORVU1Hr1G090670.5 , HORVU1Hr1G090670.4 , HORVU1Hr1G090670.6 , HORVU1Hr1G090670.3 , HORVU1Hr1G090670.2 , HORVU1Hr1G063250.20 , HORVU1Hr1G063250.21 , HORVU1Hr1G063250.15 , HORVU1Hr1G063250.17 , HORVU1Hr1G063250.16 , HORVU1Hr1G063250.11 , HORVU1Hr1G063250.10 , HORVU1Hr1G063250.13 , HORVU1Hr1G063250.12 , HORVU1Hr1G063250.19 , HORVU1Hr1G063250.18 , HORVU1Hr1G063250.14 , HORVU1Hr1G063250.1 , HORVU1Hr1G063250.3 , HORVU1Hr1G063250.2 , HORVU1Hr1G063250.5 , HORVU1Hr1G063250.4 , HORVU1Hr1G063250.7 , HORVU1Hr1G063250.6 , HORVU1Hr1G063250.9 , HORVU1Hr1G063250.8 , HORVU3Hr1G058700.1
Wheat TraesCS3B02G264200 , TraesCS1A02G412500 , TraesCS1D02G420400 , TraesCS3D02G235400 , TraesCS1A02G412800 , TraesCS1B02G443300 , TraesCS3A02G235700
Populus -


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cDNA sequences
Sobic.003G239500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G339900 expressed protein -
2 Sobic.010G195450 - -
3 Sobic.001G485200 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
4 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.008G116100 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
6 Sobic.006G107900 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.002G420400 - -
8 Sobic.004G071050 - -
9 Sobic.010G033500 expressed protein -
10 Sobic.003G400400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine proteinase inhibitor precursor protein, putative, expressed -
11 Sobic.003G363400 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
12 Sobic.010G075800 - -
13 Sobic.002G010000 NLI interacting factor-like phosphatase, putative, expressed -
14 Sobic.010G106601 - K09422: transcription factor MYB, plant
15 Sobic.001G375800 expressed protein -
16 Sobic.007G041200 cytochrome P450, putative, expressed -
17 Sobic.004G254500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
18 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
19 Sobic.007G050900 - -
20 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase


Gene co-expression network
sample Sobic003G239500 Sobic003G239500 Sobic004G339900 Sobic004G339900 Sobic003G239500--Sobic004G339900 Sobic010G195450 Sobic010G195450 Sobic003G239500--Sobic010G195450 Sobic001G485200 Sobic001G485200 Sobic003G239500--Sobic001G485200 Sobic010G054800 Sobic010G054800 Sobic003G239500--Sobic010G054800 Sobic008G116100 Sobic008G116100 Sobic003G239500--Sobic008G116100 Sobic006G107900 Sobic006G107900 Sobic003G239500--Sobic006G107900 Sobic002G420400 Sobic002G420400 Sobic003G239500--Sobic002G420400 Sobic004G071050 Sobic004G071050 Sobic003G239500--Sobic004G071050 Sobic010G033500 Sobic010G033500 Sobic003G239500--Sobic010G033500 Sobic004G339900--Sobic002G420400 Sobic004G339900--Sobic004G071050 Sobic004G339900--Sobic001G485200 Sobic001G194100 Sobic001G194100 Sobic004G339900--Sobic001G194100 Sobic010G152000 Sobic010G152000 Sobic004G339900--Sobic010G152000 Sobic007G041200 Sobic007G041200 Sobic004G339900--Sobic007G041200 Sobic004G339900--Sobic008G116100 Sobic004G065800 Sobic004G065800 Sobic004G339900--Sobic004G065800 Sobic004G163700 Sobic004G163700 Sobic004G339900--Sobic004G163700 Sobic006G047700 Sobic006G047700 Sobic010G195450--Sobic006G047700 Sobic002G197800 Sobic002G197800 Sobic010G195450--Sobic002G197800 Sobic004G254500 Sobic004G254500 Sobic010G195450--Sobic004G254500 Sobic010G195450--Sobic010G054800 Sobic005G073700 Sobic005G073700 Sobic010G195450--Sobic005G073700 Sobic007G050900 Sobic007G050900 Sobic010G195450--Sobic007G050900 Sobic001G541400 Sobic001G541400 Sobic010G195450--Sobic001G541400 Sobic002G244800 Sobic002G244800 Sobic010G195450--Sobic002G244800 Sobic010G195450--Sobic008G116100 Sobic001G485200--Sobic006G107900 Sobic003G400400 Sobic003G400400 Sobic001G485200--Sobic003G400400 Sobic001G485200--Sobic004G071050 Sobic002G391100 Sobic002G391100 Sobic001G485200--Sobic002G391100 Sobic001G017500 Sobic001G017500 Sobic001G485200--Sobic001G017500 Sobic001G485200--Sobic004G339900 Sobic010G106601 Sobic010G106601 Sobic001G485200--Sobic010G106601 Sobic001G485200--Sobic002G420400 Sobic002G302300 Sobic002G302300 Sobic001G485200--Sobic002G302300 Sobic010G054800--Sobic006G047700 Sobic010G054800--Sobic005G073700 Sobic010G054800--Sobic007G050900 Sobic010G054800--Sobic010G195450 Sobic003G100000 Sobic003G100000 Sobic010G054800--Sobic003G100000 Sobic010G054800--Sobic004G254500 Sobic001G254700 Sobic001G254700 Sobic010G054800--Sobic001G254700 Sobic010G054800--Sobic002G244800 Sobic009G250500 Sobic009G250500 Sobic010G054800--Sobic009G250500 Sobic008G116100--Sobic007G041200 Sobic009G033500 Sobic009G033500 Sobic008G116100--Sobic009G033500 Sobic010G084800 Sobic010G084800 Sobic008G116100--Sobic010G084800 Sobic002G097601 Sobic002G097601 Sobic008G116100--Sobic002G097601 Sobic004G210000 Sobic004G210000 Sobic008G116100--Sobic004G210000 Sobic005G176875 Sobic005G176875 Sobic008G116100--Sobic005G176875 Sobic008G116100--Sobic004G339900 Sobic006G186300 Sobic006G186300 Sobic008G116100--Sobic006G186300 Sobic010G047300 Sobic010G047300 Sobic008G116100--Sobic010G047300 Sobic006G107900--Sobic001G017500 Sobic006G107900--Sobic002G391100 Sobic006G107900--Sobic003G400400 Sobic003G236200 Sobic003G236200 Sobic006G107900--Sobic003G236200 Sobic002G118300 Sobic002G118300 Sobic006G107900--Sobic002G118300 Sobic003G283700 Sobic003G283700 Sobic006G107900--Sobic003G283700 Sobic007G162700 Sobic007G162700 Sobic006G107900--Sobic007G162700 Sobic006G107900--Sobic002G302300 Sobic003G363400 Sobic003G363400 Sobic006G107900--Sobic003G363400 Sobic002G420400--Sobic004G339900 Sobic002G420400--Sobic004G071050 Sobic005G036200 Sobic005G036200 Sobic002G420400--Sobic005G036200 Sobic004G242200 Sobic004G242200 Sobic002G420400--Sobic004G242200 Sobic002G420400--Sobic001G485200 Sobic003G379900 Sobic003G379900 Sobic002G420400--Sobic003G379900 Sobic001G375800 Sobic001G375800 Sobic002G420400--Sobic001G375800 Sobic002G420400--Sobic010G152000 Sobic002G420400--Sobic001G194100 Sobic004G071050--Sobic001G485200 Sobic004G071050--Sobic010G106601 Sobic004G071050--Sobic002G420400 Sobic004G071050--Sobic004G339900 Sobic004G071050--Sobic009G033500 Sobic009G253800 Sobic009G253800 Sobic004G071050--Sobic009G253800 Sobic004G071050--Sobic004G065800 Sobic004G071050--Sobic006G107900 Sobic007G091200 Sobic007G091200 Sobic004G071050--Sobic007G091200 Sobic010G033500--Sobic001G375800 Sobic010G033500--Sobic010G195450 Sobic010G033500--Sobic010G054800 Sobic010G033500--Sobic003G239500 Sobic010G033500--Sobic006G047700 Sobic010G033500--Sobic004G339900 Sobic009G002200 Sobic009G002200 Sobic010G033500--Sobic009G002200 Sobic010G033500--Sobic005G036200 Sobic010G033500--Sobic004G254500
Octagon: transcription factors


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